BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0644700 Os06g0644700|AK070101
(477 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G80510.1 | chr1:30273100-30274569 FORWARD LENGTH=490 532 e-151
AT3G30390.1 | chr3:11977112-11978827 REVERSE LENGTH=461 324 6e-89
AT5G38820.1 | chr5:15543481-15545182 FORWARD LENGTH=457 303 2e-82
AT3G56200.1 | chr3:20850087-20851779 FORWARD LENGTH=436 249 2e-66
AT2G40420.1 | chr2:16877300-16878982 FORWARD LENGTH=441 239 2e-63
AT4G38250.1 | chr4:17935533-17936843 FORWARD LENGTH=437 71 1e-12
AT2G42005.1 | chr2:17531323-17532564 REVERSE LENGTH=414 56 4e-08
AT5G15240.1 | chr5:4947762-4950211 FORWARD LENGTH=424 50 2e-06
>AT1G80510.1 | chr1:30273100-30274569 FORWARD LENGTH=490
Length = 489
Score = 532 bits (1371), Expect = e-151, Method: Compositional matrix adjust.
Identities = 282/494 (57%), Positives = 361/494 (73%), Gaps = 24/494 (4%)
Query: 1 MNTNYSSLPLTS-IELQSNQRTSEVANGVGYNGHAKISKQDSFLVD---------GEN-D 49
M+++YS + TS +ELQ NG N S ++SF+ D GE+ D
Sbjct: 1 MDSSYSVISKTSYVELQK-----PTVNGKPRNKLLP-SDEESFVNDFDDARNGVGGEDAD 54
Query: 50 DLPL-IGDGP----AGPPEGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILV 104
DL + D P +GSG+ AVFNL TSIIGAGIMALPATMKVLG+ +G V I++
Sbjct: 55 DLDFDVADYPLVHGKSSNQGSGIYGAVFNLTTSIIGAGIMALPATMKVLGLVLGFVLIIL 114
Query: 105 MGILSEVTIELLVRFAVYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIG 164
M +LSE+++ELLVRF+V ++ SYGEVV ALG+ A +++++C+I+NN GVL+VYLII+G
Sbjct: 115 MALLSEISVELLVRFSVLYKSKSYGEVVQFALGKTARVLSEICIIVNNGGVLVVYLIIMG 174
Query: 165 DVMSGSLKHIGVMDQLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXX 224
DVMSGSL HIGV+DQ +G+G WD+R+ +PLCAL KID
Sbjct: 175 DVMSGSLHHIGVLDQWLGNGFWDHRKVLILIVMVIFLAPLCALNKIDSLSVTSAASVALA 234
Query: 225 XXXXXXXCIIALVKVVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYN 284
++A +K++EG I PR+ PDF S+ A+LDLLVVIPIM+NAY+CHFNVQPIYN
Sbjct: 235 VVFVVVCFVVATIKLIEGTIDPPRLSPDFGSKQAILDLLVVIPIMSNAYVCHFNVQPIYN 294
Query: 285 ELKEKTPHNMYKIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSIL 344
EL+ ++PH M ++GRITT +CVVVYA TAVSGYLLFG+DTESD+LTNFD+DLGIRFSS +
Sbjct: 295 ELEGRSPHKMNRVGRITTAICVVVYASTAVSGYLLFGKDTESDILTNFDQDLGIRFSSAV 354
Query: 345 NFIVRIGYVIHLVLVFPVVHFSLRQTVDSLIFGELAP--HSRKKMLTLTVVLLALIYLGS 402
N+IVRIGY++HLVLVFPV+HFSLR+TV++L+F P S+K+ L LTVVLLALIY+GS
Sbjct: 355 NYIVRIGYILHLVLVFPVIHFSLRETVNTLLFEGSPPLSESKKRSLGLTVVLLALIYIGS 414
Query: 403 TMIPNIWVAFKFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSI 462
TMIPNIW AFKFTGAT+ ++LGF FPALIALRL K+ SL ER +S +ML LA+VVSI
Sbjct: 415 TMIPNIWTAFKFTGATSAVSLGFTFPALIALRLGKQSNSLSFVERSVSWLMLILAVVVSI 474
Query: 463 IGVIGNVYSLRSKS 476
+G IGN+YSL SKS
Sbjct: 475 VGTIGNIYSLESKS 488
>AT3G30390.1 | chr3:11977112-11978827 REVERSE LENGTH=461
Length = 460
Score = 324 bits (831), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 173/425 (40%), Positives = 260/425 (61%), Gaps = 18/425 (4%)
Query: 63 EGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFAVY 122
G+ AVFNLAT+IIGAGIMALPATMK+LG+ +G+ I+VM L++ +IE L+RF+
Sbjct: 41 NGASFSGAVFNLATTIIGAGIMALPATMKILGLGLGITMIVVMAFLTDASIEFLLRFSKA 100
Query: 123 CRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGS----LKHIGVMD 178
+ SYG ++ + G P I+ Q+ V++NN GVLIVY+IIIGDV++G + H GV++
Sbjct: 101 GKNRSYGGLMGGSFGNPGRILLQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLE 160
Query: 179 QLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVK 238
GH W+ R +PL ++ID I+++K
Sbjct: 161 GWFGHHWWNGRAAILLITTLGVFAPLACFKRIDSLKFTSALSVALAVVFLIITAGISIMK 220
Query: 239 VVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIG 298
++ G ++MPR+ PD + + +L V+P++ A+ICH+NV I NEL++ P + +
Sbjct: 221 LISGGVAMPRLLPDVTDLTSFWNLFTVVPVLVTAFICHYNVHSIQNELED--PSQIRPVV 278
Query: 299 RITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVL 358
R +LC VY +T++ G+LLFG+DT DVL NFD DLGI F SILN VR+ Y +HL+L
Sbjct: 279 RSALMLCSSVYIMTSIFGFLLFGDDTLDDVLANFDTDLGIPFGSILNDAVRVSYALHLML 338
Query: 359 VFPVVHFSLRQTVDSLIFGELAPHSRK------KMLTLTVVLLALIYLGSTMIPNIWVAF 412
VFP+V + LR +D L+F P +R + LT L+++I+LG+ IP+IW AF
Sbjct: 339 VFPIVFYPLRINIDGLLF----PSARSLSTSNVRFGCLTAGLISVIFLGANFIPSIWDAF 394
Query: 413 KFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSL 472
+FTGAT + LGFIFPA I L+ D+ K+ + + L+I M+ LA++ + I + + Y+L
Sbjct: 395 QFTGATAAVCLGFIFPASIILK-DRHDKATNR-DTTLAIFMIVLAVLSNAIAIYSDAYAL 452
Query: 473 RSKSA 477
K+A
Sbjct: 453 FKKNA 457
>AT5G38820.1 | chr5:15543481-15545182 FORWARD LENGTH=457
Length = 456
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/424 (38%), Positives = 249/424 (58%), Gaps = 12/424 (2%)
Query: 60 GPPEGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRF 119
G G+ AVFNLAT+IIGAGIMALPATMK+LG+ G+ I++M L++ +IE L+RF
Sbjct: 30 GEFNGASFSGAVFNLATTIIGAGIMALPATMKILGLIPGITIIVLMAFLTDASIEFLLRF 89
Query: 120 AVYCRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGS----LKHIG 175
+ SYG V+ + G+ I+ Q+ ++++N GVLIVY+IIIGDV++G + H G
Sbjct: 90 SNIGNQRSYGGVMDDSFGKCGRIMLQVSILVSNIGVLIVYMIIIGDVLAGKNEYGIHHAG 149
Query: 176 VMDQLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIA 235
+++ G W+ R +PL ++ID I
Sbjct: 150 MLEGWFGISWWNRRTFVLLVTTLTVFAPLTCFKRIDSLRFTSAISVALAVVFLVITAGIT 209
Query: 236 LVKVVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMY 295
++K+ + MPR+ P+ + ++ L V+P++ NAYICH+NV I NEL++ P +
Sbjct: 210 IIKLFTDGLMMPRLLPNVTDLSSFWKLFTVVPVLVNAYICHYNVHSIQNELED--PSRIK 267
Query: 296 KIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIH 355
+ R +C VY +T++ GYLLFG+ T DVL NFD DLGI F S+LN VR Y H
Sbjct: 268 PVVRSALAMCSSVYVMTSLFGYLLFGDGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAH 327
Query: 356 LVLVFPVVHFSLRQTVDSLIFGELAP----HSRKKMLTLTVVLLALIYLGSTMIPNIWVA 411
L+LVFPVV + LR +D LIF P S + ++T L+A+I+LG+ IP+IW A
Sbjct: 328 LMLVFPVVFYPLRINIDGLIFPTAPPLTSSESDLRFGSITAGLIAVIFLGANFIPSIWDA 387
Query: 412 FKFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYS 471
F+FTGAT + +GFIFPA + L+ D+ ++ K ++ ++I M+ LA+ + I + + Y+
Sbjct: 388 FQFTGATAAVCIGFIFPAAVILK-DRHNQAT-KRDKTIAICMIVLAVFSNAIAIYSDAYA 445
Query: 472 LRSK 475
L K
Sbjct: 446 LFKK 449
>AT3G56200.1 | chr3:20850087-20851779 FORWARD LENGTH=436
Length = 435
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 235/419 (56%), Gaps = 10/419 (2%)
Query: 63 EGSGVPAAVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFAVY 122
GS VFN++TSIIGAGIM++PA KVLG+ + I ++ LS +++ L++ +
Sbjct: 21 HGSSTSGIVFNVSTSIIGAGIMSMPAAFKVLGIVPAFLIITIIAWLSTISVGFLMKSTLA 80
Query: 123 CRALSYGEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSL----KHIGVMD 178
+ +Y V+ ++ G+ SI Q+ ++ G +I++ IIIGDV+SG+ +HIGV+
Sbjct: 81 GESTTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQ 140
Query: 179 QLIGHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVK 238
+ G W+ R PL +++ ++A+
Sbjct: 141 EWFGSYWWNTRIFALLFVYGFVLLPLVLRRRVERLAISSAVSFLLAVLFVVISSVLAISA 200
Query: 239 VVEGKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIG 298
+V G+ PR+ P+ S+ + L P++ A+ HFNV PI ELK+ P +
Sbjct: 201 LVNGQTKNPRLFPELSNGGSFWQLFTASPVIVTAFTFHFNVHPIGFELKD--PLQVIPAT 258
Query: 299 RITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVL 358
+I+ +LC +Y T + GYLLFG+ T SD+L NFD+ G S+LN IVR+ YV+HL+L
Sbjct: 259 KISVILCAAIYFATGLFGYLLFGDATMSDILVNFDQSSGSSIGSLLNDIVRLSYVLHLML 318
Query: 359 VFPVVHFSLRQTVDSLIFGELAPHSR--KKMLTLTVVLLALIYLGSTMIPNIWVAFKFTG 416
VFP+++FSLR +D L++ + + K+ + LT+ LL +L + +P+IW F+F G
Sbjct: 319 VFPLLNFSLRANLDELLYPKKPSLEKDTKRFIGLTLALLICCFLSAIAVPDIWYFFQFMG 378
Query: 417 ATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSLRSK 475
+T +++ FIFPA I LR + G S + E++++ +ML LA+ SII + N+YSL +
Sbjct: 379 STITVSIAFIFPAAIVLR-NIHGVSTSR-EKIVAAIMLVLAVATSIIAISTNLYSLAAN 435
>AT2G40420.1 | chr2:16877300-16878982 FORWARD LENGTH=441
Length = 440
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 234/412 (56%), Gaps = 11/412 (2%)
Query: 70 AVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVRFAVYCRALSYG 129
AVFN++TSI+GAGIMA+PA KVLGV L I+++ LS V+ L++ ++ + +Y
Sbjct: 29 AVFNISTSIVGAGIMAIPAAFKVLGVIPSLSIIVIIAWLSNVSAGFLMKSSLAGESTTYA 88
Query: 130 EVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLK----HIGVMDQLIGHGE 185
V+ ++ G+ ++ + ++ G +I++ IIIGDV+SG+ K H+G++ + G
Sbjct: 89 GVMKESFGKSGAVAVTVVTMVVTFGSMIIFSIIIGDVISGNEKDGIIHLGLLQEWFGSHW 148
Query: 186 WDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVKVVEGKIS 245
W+ R PL +++ ++A++ +V+GK
Sbjct: 149 WNTRFFGLLFIFVFLFLPLVLCRRVERLAFSSAISFLLALLFVVISSVLAIIALVQGKTK 208
Query: 246 MPRMGPDFSSRA-AMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIGRITTVL 304
PR+ P+ + + L P++ A+ HFNV P+ ELK+ P N+ RI+ +L
Sbjct: 209 PPRLFPELNDGGLSFFSLFTASPVIVTAFTFHFNVHPVAFELKD--PLNVLSATRISVIL 266
Query: 305 CVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVLVFPVVH 364
C +Y+ T + YLLFG+ T +DVL NFD+ S+LN IVR+ Y IHL+LVFP+++
Sbjct: 267 CATIYSATGLFCYLLFGDSTMTDVLMNFDQSTSSSVGSLLNDIVRLSYAIHLMLVFPLLN 326
Query: 365 FSLRQTVDSLIFG-ELA-PHSRKKMLTLTVVLLALIYLGSTMIPNIWVAFKFTGATTGLA 422
FSLR +D L+F +L+ K+ LT LL +LG+ IP+IW F+F G+T+ ++
Sbjct: 327 FSLRANLDELLFPMKLSLVEDNKRFFALTFPLLISCFLGAIAIPDIWYFFQFLGSTSTVS 386
Query: 423 LGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVSIIGVIGNVYSLRS 474
+ FIFPA I LR + G S + E++++ VML LA+ SII + N+Y+ +
Sbjct: 387 IAFIFPAAIVLR-NVNGFSTLR-EKIVASVMLVLAVATSIIAISTNIYTFTA 436
>AT4G38250.1 | chr4:17935533-17936843 FORWARD LENGTH=437
Length = 436
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 193/463 (41%), Gaps = 70/463 (15%)
Query: 28 VGYNGHAKISKQDSFLVDGENDDLPLIGDGPAGPPEGSGVPAAVFNLATSIIGAGIMALP 87
+G+ A S + +D PL+G GP P S N+ +++GAG++ LP
Sbjct: 1 MGFQNEASSSSYTLKIPPPAREDSPLLGKGP---PLSSQFKTFA-NVFIAVVGAGVLGLP 56
Query: 88 ATMKVLGVAVGLVSILVMGILSEVTIELLVRF--------AVYCRALSYGEVVHKALGRP 139
K G +G++ ++ + +L+ + LLV A + S+G++ G
Sbjct: 57 YAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDSFNAGISKIGSFGDLGFAVCGSL 116
Query: 140 ASIVAQMCVIINNAGVLIVYLIIIGDVMSG--------SLKH---------IGVMDQ-LI 181
IV + +I++ AG + YLI IG ++ SL+H +GV + L
Sbjct: 117 GRIVVDLFIILSQAGFCVGYLIFIGTTLANLSDPESPTSLRHQFTRLGSEFLGVSSKSLY 176
Query: 182 GHGEWDNRRXXXXXXXXXXXSPLCALEKIDXXXXXXXXXXXXXXXXXXXXCIIALVKVVE 241
G + + +PL I V +VE
Sbjct: 177 IWGCFPFQLGLNSIKTLTHLAPLSIFADIVDLGAMA-------------------VVIVE 217
Query: 242 GKISMPRMGPDFSSRAAMLDLLVVIPIMTNAYICHFNVQPIYNELKEKTPHNMYKIGRIT 301
+ + + PD + M L + + ++ V P+ +E+K+K K G++
Sbjct: 218 DSMIILKQRPDVVAFGGMSLFLYGMGVAVYSFEGVGMVLPLESEMKDKD-----KFGKVL 272
Query: 302 TV---LCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGIRFSSILNFIVRIGYVIHLVL 358
+ ++Y + GYL FGEDT D++T +LG + +++ +V++G I+L
Sbjct: 273 ALGMGFISLIYIAFGILGYLAFGEDTM-DIIT---ANLG---AGLVSTVVQLGLCINLFF 325
Query: 359 VFPVVHFSLRQTVDSLIFGELAPHSRKKMLTLTVVLLALIYLGSTMIPNIWVAFKFTGAT 418
FP++ + + V+ + + +L L V L+AL +PN G++
Sbjct: 326 TFPLMMNPVFEIVERRFSRGMYSAWLRWVLVLAVTLVAL------FVPNFADFLSLVGSS 379
Query: 419 TGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAMVVS 461
T LGF+ PAL L + KE + +IV+LG+ + VS
Sbjct: 380 TCCVLGFVLPALFHLLVFKEEMGWLQWSSDTAIVVLGVVLAVS 422
>AT2G42005.1 | chr2:17531323-17532564 REVERSE LENGTH=414
Length = 413
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 279 VQPIYNELKEKTPHNMYKIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTNFDKDLGI 338
V P+ +E K+K K+ ++ + V+Y V GY+ FG+DT D++T +LG
Sbjct: 234 VLPLESETKDKDKFG--KVLALSMLFIAVMYGSFGVLGYMAFGDDT-MDIIT---ANLG- 286
Query: 339 RFSSILNFIVRIGYVIHLVLVFPVVHFSLRQTVDSLIFGELAPHSRKKMLTLTVVLLALI 398
+ +++ +V++G I+L FP++ + + V+ + + + +L L V L+AL
Sbjct: 287 --AGVVSSLVQLGLCINLFFTFPLMMNPVFEIVERRFWSGMYCVWLRWLLVLAVTLVAL- 343
Query: 399 YLGSTMIPNIWVAFKFTGATTGLALGFIFPALIALRLDKEGKSLGKGERLLSIVMLGLAM 458
++PN G++ ALGF+ P+L L + K+ + + I++LG+
Sbjct: 344 -----LVPNFADFLSLVGSSVCCALGFVLPSLFHLMVFKDEMEWKQRALDVGILLLGV-- 396
Query: 459 VVSIIGVIGNVYSL 472
I+GV G SL
Sbjct: 397 ---ILGVSGTWSSL 407
>AT5G15240.1 | chr5:4947762-4950211 FORWARD LENGTH=424
Length = 423
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 272 AYICHFNVQPIYNELKEKTPHNMYKIGRITTVLCVVVYALTAVSGYLLFGEDTESDVLTN 331
Y H +Y +K K + I I +C +YA AV GYL++G D ES + N
Sbjct: 229 CYCAHPVFPTLYTSMKNKRQFSNVMI--ICFTICTFIYASVAVLGYLMYGSDVESQITLN 286
Query: 332 FDKDLGIRFSSILNFIVRIGYVIHLVLVFPVVHFSLRQT--VDSL--IFGELAPHSRKKM 387
D + SS + I LV P+ F+L T +D++ F + P+ R
Sbjct: 287 LPTD---KLSSKV--------AIWTTLVNPIAKFALMVTPIIDAMRSRFSRVLPNKRASG 335
Query: 388 LTLTVVLLALIYLGSTMIPNIWVAFKFTGATTGLALGFIFPALIALRLDKEGKSLG-KGE 446
L+ +L+ + + ++P GA + I P L L++ + + LG +
Sbjct: 336 FLLSTILVTSNVIVALLLPFFGDLMSLVGAFLSASASVILPCLCYLKISGKYQRLGFETL 395
Query: 447 RLLSIVMLGLAMVVS 461
L+ I + G+ +V++
Sbjct: 396 VLIGITLTGIVVVIT 410
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.141 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,997,699
Number of extensions: 366022
Number of successful extensions: 998
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 979
Number of HSP's successfully gapped: 18
Length of query: 477
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 375
Effective length of database: 8,310,137
Effective search space: 3116301375
Effective search space used: 3116301375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 114 (48.5 bits)