BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0643000 Os06g0643000|AK067701
(710 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32160.1 | chr4:15529056-15532892 FORWARD LENGTH=724 437 e-122
AT3G15920.1 | chr3:5383768-5386955 REVERSE LENGTH=756 432 e-121
AT2G25350.1 | chr2:10797599-10800756 FORWARD LENGTH=644 394 e-110
AT5G06140.1 | chr5:1856212-1858752 REVERSE LENGTH=403 49 6e-06
>AT4G32160.1 | chr4:15529056-15532892 FORWARD LENGTH=724
Length = 723
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 284/723 (39%), Positives = 393/723 (54%), Gaps = 76/723 (10%)
Query: 16 SPPKHRHDGTSGLPFGMDWSPPPKRWEGRNTIWPHNPQTGWSYCVMIPSWIAQTPEASAT 75
SPPKHRHDGTS LP GMDWSPPP++W GR+T+WPH+P+TGWSYCV IPSWI P++ +
Sbjct: 6 SPPKHRHDGTSPLPLGMDWSPPPRKWNGRDTVWPHDPRTGWSYCVTIPSWIV-LPKSRNS 64
Query: 76 ADNFLKSIVFYRIHVGIQSPEGISSSHGVLRRFSDFLKLSSDLKQEFPRKGIPPAPPKHA 135
+VFYR+ V +QSPEGI++ GVLRRF+DFLKL +DLK+ FPRKG P APPK
Sbjct: 65 -----DPVVFYRVQVSVQSPEGITTMRGVLRRFNDFLKLLTDLKRTFPRKGFPSAPPK-G 118
Query: 136 FSRINSSRVLLEERRNALEEWMQKLLSDIELSRSAPVAAFLELEAAARSYYQDWNQRPSE 195
R+ SR +LEERR +LEEW+ KLLSDIEL+RS VA+FLELEAAARS QD +Q S+
Sbjct: 119 LLRMK-SRAVLEERRCSLEEWITKLLSDIELARSVVVASFLELEAAARSACQDVDQNASD 177
Query: 196 VGXXXXXXXXX--------------XPRPDEHGSGVLSESSQMNS-AFAHGNGPTGATGN 240
++GS E+S++ S + + T +
Sbjct: 178 SNNDRSSTSSSPMVHPSLSLFHAGGSTLTSDYGSDTAYETSEVGSPSVGQDDISEIGTED 237
Query: 241 GMLGESI-LDQPNERAS--SMSNHRKKNHV----------FLEHGVRNGSI------DTY 281
L E + L P E+ SMSN + + F +H VR+ + D Y
Sbjct: 238 LTLDEDLTLTNPIEKLVNFSMSNIDEGLSMSETILEQLEDFPKHKVRSRYVNNILGKDVY 297
Query: 282 KGVVSEEDHDSNPG---------------HARKDSAESIGSDLSSLRGSELSVPGVSSSL 326
G S+ +N G H R DSAE +L + S G+ S
Sbjct: 298 NGNASKGVFLANNGSRLLSEPEPSTHSVMHDRNDSAERF-----ALHTGQTSTSGLLISS 352
Query: 327 WDGPVDLPSGIDGHSQTEQFTGLDMQLLYDMDAQIILPADQRPKLTRLLISMDRRQVTAK 386
D +DL G TGL AQI+LP + R KL R+L++ + R V AK
Sbjct: 353 RDSHLDLRQG----PGVSLGTGLVCNPERQGSAQIVLPLELRNKLNRILLATNERLVNAK 408
Query: 387 TDMEDLIARLNQEVAVKEYLATKVKDLEVELEATKKKDKEILHQAVLTEREKITQLQWDK 446
TDMEDLIARLNQE+AVK+YL KV DLE ELE TK++ KE L QA+++ERE+ Q+QWD
Sbjct: 409 TDMEDLIARLNQEIAVKDYLNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDM 468
Query: 447 DELYRKYSEMESNLKIEQNEKTRVQSEKTTASGXXXXXXXXXXXXXXXXXSLQQHIGEFE 506
+EL +K EME LK ++ + + + L + E E
Sbjct: 469 EELRQKSYEMEMKLKSREDGSSHAEPTVQSTISEKHVLSKELDARKQQLEDLSRRYEELE 528
Query: 507 AKSKADIKVLVKEVKSLRNSQKEMKKVLNQYHEEKTELERIVNREKQRSTRARFSREKIL 566
AKSKAD+KVLVKEVKSLR S E++K L +KT E+++ E++ +R+K+L
Sbjct: 529 AKSKADMKVLVKEVKSLRRSHVELEKELTHSLTDKTNAEKLLQEERKLLENTVAARKKLL 588
Query: 567 HECRLLRERLQECTAKFVADEQDTMTIDLSSLPDALDLVTTSDNRIRLLVAEAQLLXXXX 626
+CR+L +RL+E D D +++ D L L++ SD++I EAQLL
Sbjct: 589 SDCRILHDRLKEYNLNLSMDGNGNFVDDSTTISDVLRLLSISDDQIE----EAQLL---- 640
Query: 627 XXXXXXXXXXXXXXXXVTMSSEDAYVTDEETTKMLSDLLIDNAQLRLRLNSLIRNAVNTA 686
++M +E + ++E K+L+++ ++NA+LR ++NS + A+
Sbjct: 641 -SGFDENAAAEDIDKTLSMDTE-TRIMEDELRKILANIFVENAKLRKQVNSAMLRALQKD 698
Query: 687 VKT 689
VKT
Sbjct: 699 VKT 701
>AT3G15920.1 | chr3:5383768-5386955 REVERSE LENGTH=756
Length = 755
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 272/731 (37%), Positives = 417/731 (57%), Gaps = 77/731 (10%)
Query: 16 SPPKHRHDGTSGLPFGMDWSPPPKRWEGRNTIWPHNPQTGWSYCVMIPSWIAQTPEASAT 75
SPP HRHDG S LP GMDWS PP+ EGR+T+WPH+ +TGWSYCV +PSW+ P++S +
Sbjct: 66 SPP-HRHDGRSPLPLGMDWSSPPRHLEGRDTVWPHDHRTGWSYCVTVPSWV-DLPKSSVS 123
Query: 76 ADNFLKSIVFYRIHVGIQSPEGISSSHGVLRRFSDFLKLSSDLKQEFPRKGIPPAPPKHA 135
VFYR+ V IQSPEGI+S+ VLRRF+DFL+L S +K+EF +K +P APPK
Sbjct: 124 -----DPAVFYRVQVAIQSPEGITSARLVLRRFNDFLELYSSIKKEFVKKSLPQAPPKKI 178
Query: 136 FSRINSSRVLLEERRNALEEWMQKLLSDIELSRSAPVAAFLELEAAARSYYQDWNQR--- 192
N + LLEERR +LE+WM +LLSDI++SRSA +A FLELEAA RSY+ D Q
Sbjct: 179 LRMRN--QTLLEERRCSLEDWMNRLLSDIDISRSALIATFLELEAAVRSYFNDEYQETED 236
Query: 193 ---------PSEV----GXXXXXXXXXXPRPDE--HGSGVLSESSQMNSAFAHGNGPTG- 236
P+ + G DE + S + + + + + F+ +
Sbjct: 237 TSGDIPSLLPTTISDVPGSSSVTIDHDNDSADETSNASTMKHDEANLKNLFSRNSTAVDN 296
Query: 237 -------ATGNGMLGESILDQPNERASSMSNHRKKNHVFLEHGVRNGSIDTYKGVVSEED 289
T G+L +S + ER SS NG D G V+
Sbjct: 297 VTDWHELITEYGLLDQSSFQEKVERLSST----------------NG--DAATGTVTRGG 338
Query: 290 HDSNPGHARKDSAESIGSDLS--SLRGSELSVPGVSSSLWDGPVDLPS-GIDGHSQTEQF 346
S G R D ++ +L+ S++ + +S S+++ V+ + I G + +
Sbjct: 339 ISSGVGIQRLDGSDRKFQELTIESIKKTHVSDFEASTAVEPDLVNQGAMDIHGEAHGNMY 398
Query: 347 TGLDMQLLYDMDAQIILPADQRPKLTRLLISMDRRQVTAKTDMEDLIARLNQEVAVKEYL 406
+ D I+ +++R KL R++ ++ +R TAK D EDLI+RLNQE+AV+++L
Sbjct: 399 GAVGGDTETQKDLAIVFQSEERHKLKRVIDTLKQRLETAKADTEDLISRLNQELAVRQFL 458
Query: 407 ATKVKDLEVELEATKKKDKEILHQAVLTEREKITQLQWDKDELYRKYSEMESNLKIEQNE 466
+TKV+DLEVELE T++ K+ + + VL E+E+ TQ+QWD +EL ++ EMES L ++E
Sbjct: 459 STKVRDLEVELETTRESCKQGMEKTVLDEKERFTQIQWDMEELRKQCMEMESFLNSIKDE 518
Query: 467 KTRVQSEKTTASGXXXXXXXXXXXXXXXXXSLQQHIGEFEAKSKADIKVLVKEVKSLRNS 526
KT +++ + + + E E K+KA++KVLVKEVKSLR +
Sbjct: 519 KTHIETANESLVQENQMLLQQINDIRENFENFHKEHEELEVKAKAELKVLVKEVKSLRTT 578
Query: 527 QKEMKKVLNQYHEEKTELERIVNREKQRSTRARFSREKILHECRLLRERLQECTAKFVAD 586
Q ++++ L+ +EK E+ERIV REK R A+ + +K+LHEC +L+ RLQEC KF +
Sbjct: 579 QSDLRQELSGIMKEKLEMERIVQREKDREETAKNADKKLLHECDVLQNRLQECNVKFDIE 638
Query: 587 EQDTMTIDLSSLPDALDLVTTSDNRIRLLVAEAQLLXXXXXXXXXXXXXXXXXXXXVTMS 646
E+ + +D SSL +A++L+ TSDNRI LL+AE QLL + ++
Sbjct: 639 EEGKLIMDSSSLSEAIELLATSDNRIGLLIAETQLL--------------SEEVEKLKLT 684
Query: 647 SEDAYVTDEETTKMLSDLLIDNAQLRLRLNSLIRNAVN---TAVK---TEKEGSDGTVP- 699
S TD+ KML+++LIDNA+LR ++NS++R +++ +V+ TE + +G++
Sbjct: 685 SGGHRGTDDLVRKMLTEVLIDNARLRKQVNSVLRCSLSGHGISVREAGTEVDDEEGSIDL 744
Query: 700 KKTVLNWLLDR 710
+TV++ +L++
Sbjct: 745 ARTVMSKILEK 755
>AT2G25350.1 | chr2:10797599-10800756 FORWARD LENGTH=644
Length = 643
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 247/617 (40%), Positives = 342/617 (55%), Gaps = 39/617 (6%)
Query: 16 SPPKHRHDGTSGLPFGMDWSPPPKRWEGRNTIWPHNPQTGWSYCVMIPSWIAQTPEASAT 75
SPPKHRHDG S LP GMDWSPPP+ W GR+TIWPH+ +TGWSYCV IPSW + ++
Sbjct: 5 SPPKHRHDGASPLPLGMDWSPPPRNWNGRDTIWPHDFRTGWSYCVTIPSWTLLSKSKNSD 64
Query: 76 ADNFLKSIVFYRIHVGIQSPEGISSSHGVLRRFSDFLKLSSDLKQEFPRKGIPPAPPKHA 135
IVFYR+ V +QSPEG+S+ G+LRRF+DF+KL +DLK+ FPRK P APPK
Sbjct: 65 P------IVFYRVQVSVQSPEGVSTMRGILRRFNDFVKLLADLKRAFPRKSFPSAPPK-G 117
Query: 136 FSRINSSRVLLEERRNALEEWMQKLLSDIELSRSAPVAAFLELEAAARSYYQDWNQRPSE 195
F R+ SR +LEERR +LE+WM KLLSDIEL+RS VA+FLELEA ARS Q +Q S+
Sbjct: 118 FLRVK-SRDMLEERRCSLEDWMTKLLSDIELARSVVVASFLELEATARSACQVVDQNASD 176
Query: 196 V---GXXXXXXXXXXPR-------PDEHGSGVLSESSQMNSA-FAHGNGPTGATGNGMLG 244
G P ++GS E+S++ SA + TG+ L
Sbjct: 177 SNDDGNSTSLSSLVHPNSGGSSLLSSDYGSDTAYETSELGSASLGQDDVSETDTGDLTLD 236
Query: 245 ESILDQPNERAS--SMSNHRK----------------KNHVFLEHGVRNGSIDTYKGVVS 286
E L P E+ SMSN + K+ V L + ++Y G S
Sbjct: 237 ED-LTNPTEKLVKFSMSNIDEGLSMSQTIIEQLEDFPKHRVHLGYANDITETNSYNGKAS 295
Query: 287 EEDHDSNPGHARKDSAESIGSDLSSLRGSELSVPGVSSSLWDGPVDLPSGIDGHSQTEQF 346
+ +N + +E+ S + + S S GVS + HSQ +
Sbjct: 296 KGVFRANNDLRCRSESETSHSVMHDRKLSLESADGVSLLAGETSTSSILSSIVHSQLDVN 355
Query: 347 TGLDM-QLLYDMDAQIILPADQRPKLTRLLISMDRRQVTAKTDMEDLIARLNQEVAVKEY 405
+ + L + +I+LP KL R+L++M+ R + +KTDMEDLIARLNQE AVKEY
Sbjct: 356 HDISVGNLEIPGNGRIVLPLKMHSKLNRILLTMNERLLNSKTDMEDLIARLNQETAVKEY 415
Query: 406 LATKVKDLEVELEATKKKDKEILHQAVLTEREKITQLQWDKDELYRKYSEMESNLKIEQN 465
L KV DLEVELE TK+++KE L QA++TER+ +T++QWD +EL +K EME LK +++
Sbjct: 416 LNRKVDDLEVELETTKQRNKENLEQALMTERQSVTKMQWDMEELRQKTFEMELKLKSKED 475
Query: 466 EKTRVQSEKTTASGXXXXXXXXXXXXXXXXXSLQQHIGEFEAKSKADIKVLVKEVKSLRN 525
+ ++ + L + E EAKSKADIKVLV+EVKSLR
Sbjct: 476 GSSDSKTSGNSTISESHELLQEMDATKQQLEDLSRRYVELEAKSKADIKVLVREVKSLRR 535
Query: 526 SQKEMKKVLNQYHEEKTELERIVNREKQRSTRARFSREKILHECRLLRERLQECTAKFVA 585
S EM+K L + EK++ E+++ +E+ +R ++ +C +L +RL+
Sbjct: 536 SHMEMEKELTRSLTEKSDTEKLLQQERIIVENTLEARRRLYSDCEILHDRLKVNNTNLSM 595
Query: 586 DEQDTMTIDLSSLPDAL 602
DE DLS + +AL
Sbjct: 596 DESSNNREDLSEVSNAL 612
>AT5G06140.1 | chr5:1856212-1858752 REVERSE LENGTH=403
Length = 402
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 78 NFLKSIVFYRIHVGIQSPEGISSSHGVLRRFSDFLKLSSDLKQEFPRKGIPPAPPKHAFS 137
N +++ + YR+ PE V+RR+SDF+ L L +++ IPP P K A
Sbjct: 38 NGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVE 97
Query: 138 RINSSRVLLEERRNALEEWMQKLLSDIELSRSAPVAAFLE 177
+ S +E RR AL+ ++ ++ EL +S + FL+
Sbjct: 98 KFRFSAEFIEMRRAALDIFVNRIALHPELQQSEDLRTFLQ 137
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,227,154
Number of extensions: 596325
Number of successful extensions: 2285
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 2271
Number of HSP's successfully gapped: 5
Length of query: 710
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 604
Effective length of database: 8,200,473
Effective search space: 4953085692
Effective search space used: 4953085692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)