BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0635200 Os06g0635200|AK068319
(452 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G20300.1 | chr3:7079832-7081809 REVERSE LENGTH=453 318 3e-87
AT1G50630.1 | chr1:18751654-18753569 REVERSE LENGTH=454 299 3e-81
AT4G22270.1 | chr4:11773396-11775782 FORWARD LENGTH=438 259 2e-69
AT4G03820.2 | chr4:1772163-1774380 REVERSE LENGTH=454 239 3e-63
AT2G21080.1 | chr2:9043707-9045113 FORWARD LENGTH=415 176 3e-44
AT1G67570.1 | chr1:25325318-25326938 FORWARD LENGTH=457 155 4e-38
>AT3G20300.1 | chr3:7079832-7081809 REVERSE LENGTH=453
Length = 452
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/432 (41%), Positives = 231/432 (53%), Gaps = 18/432 (4%)
Query: 32 RASMLQRCVSRADDELQWFRSCLRWVCMDHSGPWGXXXXXXXXXXXXXXXXXXXXXXXX- 90
R + R VS A DEL FR LRW+C+D S PW
Sbjct: 28 RENKFTRSVSHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVVFTLVVPATSHFMLAC 87
Query: 91 ---XRASRRPFXXXXXXXXXXXXXXGFLCLSSSFRRIGLRRLLYLDKLRTKSDRVRLNYT 147
RP+ FLCLS + GLRR L+ DKL +S+ VRL YT
Sbjct: 88 SDCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFFDKLWDESETVRLGYT 147
Query: 148 XXXXXXXXXXXXXVAPCFAAEAAYKVWWYATSGDRVPFFGNDVLSNAVACSVEMAAWMYR 207
V+PCF A ++YK+WWYA+ ++PF GN +LS+ VAC +E+ +W+YR
Sbjct: 148 NQLNRSLKILSYFVSPCFLAMSSYKIWWYASGASQIPFLGNVILSDTVACLMELCSWLYR 207
Query: 208 SAIYLLTCVLFRLICHLQGLRLEDFAGTXXXXXXXXXXXXXXXXXXHLDIRKQLKVISHR 267
+ + L CVLFRLICHLQ LRL+DFA HL IR+ L++ISHR
Sbjct: 208 TTVIFLVCVLFRLICHLQILRLQDFA-----QVFQMDSDVGSILSEHLRIRRHLRIISHR 262
Query: 268 FRKFIVASLLIATASQFASLLLTTRHDSVDDLLNTSELALCSVVLMSGLIIILSSAAKIT 327
+R FI+ SL++ T SQF SLL+TT+ + ++ ELALCS+ L++ L+I+L SA+KIT
Sbjct: 263 YRTFILLSLILVTGSQFYSLLITTKAYAELNIYRAGELALCSMTLVTALLILLRSASKIT 322
Query: 328 HQAQALTGQTTKWHACCTIEPVPDEEAEP------GSNHSSMLXXXXXXXXXXXXXXXXX 381
H+AQA+T KWH C TIE + E S H
Sbjct: 323 HKAQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHG--YYPTDDDNGESDSEDYGD 380
Query: 382 XXXXXXNTKIMLPQAH-VISFQKRQALVTYLENNRAGITVFGFTLDRSYLHTIFMLEWTL 440
N ++ A+ ISFQKRQALV Y ENNR+GITVFGFTLDRS LHTIF +E +L
Sbjct: 381 EEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFGIEMSL 440
Query: 441 FLWLLGKTIGFS 452
LWLLGKTIG S
Sbjct: 441 VLWLLGKTIGIS 452
>AT1G50630.1 | chr1:18751654-18753569 REVERSE LENGTH=454
Length = 453
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 233/434 (53%), Gaps = 21/434 (4%)
Query: 35 MLQRCVSRADDELQWFRSCLRWVCMDHSGPWGXXXXXXXXXXXXXXXXXXXXXXXX---- 90
+ RCVS DEL FR LRW+C+DHS PW
Sbjct: 25 IFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLACADC 84
Query: 91 XRASRRPFXXXXXXXXXXXXXXGFLCLSSSFRRIGLRRLLYLDKLRTKSDRVRLNYTXXX 150
RP+ FLCL+ + GLRR L+ DKL +S+ VR NYT
Sbjct: 85 DSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFFDKLWDESETVRRNYTNQL 144
Query: 151 XXXXXXXXXXVAPCFAAEAAYKVWWYATSGDRVPFFGNDVLSNAVACSVEMAAWMYRSAI 210
V PCF+A +AYK+WWYA+ G R+PF GN VLS+ VAC +E+ +W+YR+ +
Sbjct: 145 NTSLHIVSYFVIPCFSAMSAYKIWWYASGGSRIPFLGNAVLSDTVACIMELCSWLYRTTV 204
Query: 211 YLLTCVLFRLICHLQGLRLEDFAGTXXXXXXXXXXXXXXXXXXHLDIRKQLKVISHRFRK 270
L CVLFRLICHLQ LRL+DFA HL IR+ L++ISHR+R
Sbjct: 205 IFLVCVLFRLICHLQILRLQDFAK-----LFQIDSDVGSILSEHLRIRRHLRIISHRYRS 259
Query: 271 FIVASLLIATASQFASLLLTTRHDSVDDLLNTSELALCSVVLMSGLIIILSSAAKITHQA 330
FI+ L++ T SQF+SLL+TT+ + ++ ELALCS+ L++ L+I+L SA+KITH+A
Sbjct: 260 FILCLLILVTGSQFSSLLITTKAYTEVNIYRAGELALCSMTLVTALLILLRSASKITHKA 319
Query: 331 QALTGQTTKWHACCTIEPVP------DEEAEPGS----NHSSMLXXXXXXXXXXXXXXXX 380
QA+T KWH C T+E D+ E + N++
Sbjct: 320 QAVTCLAAKWHVCATLESFDQTVESFDQTVETPTLVARNNNDNNNVHDVVTLTESDSDEY 379
Query: 381 XXXXXXXNTKIMLP--QAHVISFQKRQALVTYLENNRAGITVFGFTLDRSYLHTIFMLEW 438
+ ++P +SFQKRQALV+Y ENN AGITV+GFTLDR LHTIF LE
Sbjct: 380 GDEEDDLDNNDIIPVYAFSTMSFQKRQALVSYFENNSAGITVYGFTLDRGTLHTIFGLEL 439
Query: 439 TLFLWLLGKTIGFS 452
+L LWLLGKTIG S
Sbjct: 440 SLVLWLLGKTIGIS 453
>AT4G22270.1 | chr4:11773396-11775782 FORWARD LENGTH=438
Length = 437
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 7/357 (1%)
Query: 95 RRPFXXXXXXXXXXXXXXGFLCLSSSFRRIGLRRLLYLDKLRTKSDRVRLNYTXXXXXXX 154
RRP+ F+ LS R+ G+RR L+LDKL SD+VR+ Y
Sbjct: 82 RRPYDVIVQLSLSIFAGISFVSLSIWSRKFGMRRFLFLDKLWDVSDKVRIEYEAEIQRSL 141
Query: 155 XXXXXXVAPCFAAEAAYKVWWYATSGDRVPFFGNDVLSNAVACSVEMAAWMYRSAIYLLT 214
V P EA Y++WWY + +++P+ N +LS+ VAC++++++W+YR++++++
Sbjct: 142 KRLMIFVLPSLTLEATYRIWWYISGFNQIPYIINPILSHVVACTLQLSSWLYRNSLFIIV 201
Query: 215 CVLFRLICHLQGLRLEDFAGTXXXXXXXXXXXXXXXXXXHLDIRKQLKVISHRFRKFIVA 274
C+L+++ CHLQ LRL+DFA H IR+ L+++SHRFR+FI+
Sbjct: 202 CILYKITCHLQTLRLDDFA----RCFASEITDVRSALGEHQKIRRNLRIVSHRFRRFILL 257
Query: 275 SLLIATASQFASLLLTTRHDSVDDLLNTSELALCSVVLMSGLIIILSSAAKITHQAQALT 334
SL++ TA+QF +LL TTR ++ ELALCS+ L++G+ I L SA KITH+AQ++T
Sbjct: 258 SLILVTATQFMALLTTTRASVAVNIYEVGELALCSLSLVTGVFICLRSATKITHKAQSVT 317
Query: 335 GQTTKWHACCTIEPVP--DEEAEPGSNHSSMLXXXXXXXXXXXXXXXXXXXXXXXNTKIM 392
KW+ C T++ D E GS S + NTKI
Sbjct: 318 SLAAKWNVCATVDSFDHLDGETPTGSIIESQV-SLRGNAIETSDDEEGEGDDDLDNTKIH 376
Query: 393 LPQAHVISFQKRQALVTYLENNRAGITVFGFTLDRSYLHTIFMLEWTLFLWLLGKTI 449
A+ IS+QKRQALVTYLENN+AGITV+GF +DRS+L+TIF +E L LWLL KTI
Sbjct: 377 PIYANTISYQKRQALVTYLENNKAGITVYGFLVDRSWLNTIFGIELALLLWLLNKTI 433
>AT4G03820.2 | chr4:1772163-1774380 REVERSE LENGTH=454
Length = 453
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/362 (37%), Positives = 202/362 (55%), Gaps = 12/362 (3%)
Query: 95 RRPFXXXXXXXXXXXXXXGFLCLSSSFRRIGLRRLLYLDKLRTKSDRVRLNYTXXXXXXX 154
RRP+ F+ LS ++ G+RR L+ DKL+ SD+VR+ Y
Sbjct: 79 RRPYDGLVQLSLSIFAGISFVSLSDWSKKYGIRRFLFFDKLKDVSDKVRIGYEAKIQRSM 138
Query: 155 XXXXXXVAPCFAAEAAYKVWWYATSGDRVPFFGNDVLSNAVACSVEMAAWMYRSAIYLLT 214
V P +A Y++WWYA+ +++P+ N LS+ +AC++++++W+YR++++++
Sbjct: 139 KLLAIFVLPSTTLQAIYRIWWYASGFNQIPYIINPTLSHVLACTLQLSSWLYRTSLFIIA 198
Query: 215 CVLFRLICHLQGLRLEDFAGTXXXXXXXXXXXXXXXXXXHLDIRKQLKVISHRFRKFIVA 274
C+L++ ICHLQ LRL++FA HL IR++LK++SHRFR+FI+
Sbjct: 199 CILYQNICHLQVLRLDEFARC----FASEIKDFSSILAEHLKIRRELKIVSHRFRRFILL 254
Query: 275 SLLIATASQFASLLLTTRHDSVDDLLNTSELALCSVVLMSGLIIILSSAAKITHQAQALT 334
SL TA+QF +LL T R ++ ELALCS L+SGL I L SA ++TH+AQ++T
Sbjct: 255 SLFFVTATQFMALLTTIRASVPFNIYEVGELALCSTSLVSGLFICLKSATQMTHKAQSVT 314
Query: 335 GQTTKWHACC---TIEPVPDEEAEP---GSNHSSMLXXXXXXXXXXXXXXXXXXXXXXXN 388
TKW+ C T + + D E + HS +L
Sbjct: 315 SIATKWNVCASLDTFDVLYDGETPKCPTTTQHSQILSRRRNVVQSSDDDEEGEGDDNDLE 374
Query: 389 TKIMLPQAHVISFQKRQALVTYLENNRAGITVFGFTLDRSYLHTIFMLEWTLFLWLLGKT 448
+ +A IS QKRQALVTYLENNRAGITV+GF +D+++L IF +E L LWLL KT
Sbjct: 375 IHPIFARA--ISSQKRQALVTYLENNRAGITVYGFLVDKTWLRMIFSIELALLLWLLKKT 432
Query: 449 IG 450
I
Sbjct: 433 IS 434
>AT2G21080.1 | chr2:9043707-9045113 FORWARD LENGTH=415
Length = 414
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 184/427 (43%), Gaps = 43/427 (10%)
Query: 36 LQRCVSRADDELQWFRSCLRWVCMDHSGPWGXXXXXXXXXXXXXXXXXXXXXXXXXRASR 95
LQ S D+L+ FR L+W +DHS G +R
Sbjct: 21 LQPSKSLPSDDLRNFRLLLKWCALDHSSSCGKAVSYMMFVVFTLLVPLISCLFIKTPRNR 80
Query: 96 -------RPFXXXXXXXXXXXXXXGFLCLSSSFRRIGLRRLLYLDKLRTKSDRVRLNYTX 148
F GFL L FR L +LL+LD S VRL Y+
Sbjct: 81 PSAVMDANSFNVLVQFPESGLAVIGFLTLICFFRIYSLTKLLFLDD----STLVRLGYSR 136
Query: 149 XXXXXXXXXXXXVAPCFAAEAAYKVWWYATSGDRVPFFGNDVLS-NAVACSVEMAAWMYR 207
+ P F E +K ++ ++ PF + + N V + + +W+YR
Sbjct: 137 ELDKALRYLAYILVPSFLVELVHKSIFFYSAEVSFPFIKSSCAALNFVMFFLVLFSWVYR 196
Query: 208 SAIYLLTCVLFRLICHLQGLRLEDFAGTXXXXXXXXXXXXXXXXXXHLDIRKQLKVISHR 267
+ ++LL C+LFRL C LQ LR F G H+ I+KQL SHR
Sbjct: 197 TGVFLLVCILFRLTCELQILR---FRGLHKLFDRCGSDTIEDVCKEHVRIKKQLSATSHR 253
Query: 268 FRKFIVASLLIATASQFASLLLTTRHDSVDDLLNTSELALCSVVLMSGLIIILSSAAKIT 327
+R FI+ + ++ + SQF +LLL S L++ +L +CS V +SG + L AA+IT
Sbjct: 254 YRFFIITAFVVISTSQFVALLLVLASKSEKSFLSSGDLVVCSAVQLSGFFLCLLGAARIT 313
Query: 328 HQAQALTGQTTKWHACCTIEPVPDEEAEPGSNHSSMLXXXXXXXXXXXXXXXXXXXXXXX 387
H+AQ + T+WH T E P S+ S
Sbjct: 314 HRAQGVVCIATRWHMALT---CASEAVSPESDTDS-----------------------SD 347
Query: 388 NTKIMLPQAHVIS--FQKRQALVTYLENNRAGITVFGFTLDRSYLHTIFMLEWTLFLWLL 445
N I + + +S FQ RQALV YL +N GIT++G+ LDR LHT+F E++L +W+L
Sbjct: 348 NIYINVSPSLDLSSFFQARQALVEYLRHNNKGITLYGYALDRGLLHTLFAFEFSLVMWIL 407
Query: 446 GKTIGFS 452
K + S
Sbjct: 408 SKVVVLS 414
>AT1G67570.1 | chr1:25325318-25326938 FORWARD LENGTH=457
Length = 456
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 20/346 (5%)
Query: 113 GFLCLSSSFRRIGLRRLLYLDKLRTKSDRVRLNYTXXXXXXXXXXXXXVAPCFAAEAAYK 172
LC+S + R+ G+R+ L++D+L + DR++ Y PCFA + +
Sbjct: 121 SLLCVSHNLRKHGIRKFLFVDQLSGRMDRLKAQYIQQILNSVRLLAVWSLPCFALKGVRE 180
Query: 173 VWWYATSGDRVPFFGNDV--LSNAVACSVEMAAWMYRSAIYLLTCVLFRLICHLQGLRLE 230
+ R+ + +D LS A+ S+ + +W Y S I+L +F L+C+LQ + E
Sbjct: 181 II-------RMYYVPHDQPWLSVAILLSM-ILSWTYLSTIFLAASAMFHLVCNLQVIHFE 232
Query: 231 DFAGTXXXXXXXXXXXXXXXXXXHLDIRKQLKVISHRFRKFIVASLLIATASQFASLLLT 290
D+A H+ +R L ISHRFR F++ L+ TASQF +L T
Sbjct: 233 DYA-----KLLEGESEISLFIYEHMRLRHYLSKISHRFRIFLLLQFLVVTASQFTTLFQT 287
Query: 291 TRHDSVDDLLNTSELALCSVVLMSGLIIILSSAAKITHQAQALTGQTTKWHA--CCTIEP 348
T + +N + A+ +VV + G+I+ L +A KI+H+AQA+ ++WHA C+
Sbjct: 288 TAYSGRITYINGGDFAVSAVVQVVGIILCLHAATKISHRAQAIASVASRWHAMMSCSSTD 347
Query: 349 VPDEEAEPGSNHSSMLXXXXXXXXXXXXXXXXXXXXXXXNTKI--MLPQ-AHVISFQKRQ 405
A P H + P + S+ KRQ
Sbjct: 348 STQIRASPSGVHLEATTNPPISFPISRSDSDVESMDHYMRMPVTNQFPSYMSMSSYHKRQ 407
Query: 406 ALVTYLENNRAGITVFGFTLDRSYLHTIFMLEWTLFLWLLGKTIGF 451
A V YL+ N GIT+FG+T+DR ++TIF +E +L ++LGKT+ F
Sbjct: 408 AFVLYLQMNPGGITIFGWTVDRHLINTIFFIELSLVTFVLGKTVVF 453
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,485,771
Number of extensions: 184426
Number of successful extensions: 530
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 521
Number of HSP's successfully gapped: 11
Length of query: 452
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 350
Effective length of database: 8,310,137
Effective search space: 2908547950
Effective search space used: 2908547950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 113 (48.1 bits)