BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0634300 Os06g0634300|AK072100
(303 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47650.1 | chr5:19310391-19312084 REVERSE LENGTH=279 335 2e-92
AT4G25434.2 | chr4:13004043-13005771 REVERSE LENGTH=305 283 6e-77
AT2G04450.1 | chr2:1543710-1545319 FORWARD LENGTH=284 257 5e-69
AT5G47240.1 | chr5:19183806-19185467 FORWARD LENGTH=370 251 3e-67
AT4G12720.4 | chr4:7487716-7489557 FORWARD LENGTH=323 246 1e-65
AT2G04430.1 | chr2:1538944-1541027 FORWARD LENGTH=303 241 5e-64
AT2G04440.1 | chr2:1541523-1542729 FORWARD LENGTH=216 133 1e-31
>AT5G47650.1 | chr5:19310391-19312084 REVERSE LENGTH=279
Length = 278
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 205/282 (72%), Gaps = 9/282 (3%)
Query: 1 MSSSTNSTV-LAESVATGSSVDVELLPFVNDKHGGVIVEMTAPMDPQLFXXXXXXXXXXW 59
MS+S++ST ++ AT LLP V DK+GGV+ EMT PMDP LF W
Sbjct: 1 MSASSSSTNPMSREDAT------TLLPSVQDKYGGVMTEMTHPMDPSLFSTLLRSSLSTW 54
Query: 60 REQGIRGVWIKLPISLANLIQYAVEEGFWYHHAEETYLMLAYWLPATTHTLPVNATHRVG 119
QG +GVWIKLP L L + AV+EGFW+HHAE+ YLML YW+P TLP NA+HRVG
Sbjct: 55 TLQGKKGVWIKLPKQLIGLAETAVKEGFWFHHAEKDYLMLVYWIPKEDDTLPANASHRVG 114
Query: 120 VGAFVMNDKREVLAVQEKSGVLRGLGVWKFPTGVVEPGEDINLGAVREVKEETGIDTEFV 179
+GAFV+N +EVL VQEK+G +G G+WKFPTGVV GEDI+ G+VREVKEETG+DTEF
Sbjct: 115 IGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFD 174
Query: 180 EVLAFRQSHKAFFDKSDLFFVCILRPLSFDITKQDSEIEAAQWMPVEEFAAQPFVQKHEL 239
++LAFRQ+HKAFF KSDLFFVC+L+PLS +I Q+SEIEAAQWMP EE+ QPFVQ +EL
Sbjct: 175 QILAFRQTHKAFFGKSDLFFVCMLKPLSLEINAQESEIEAAQWMPWEEYINQPFVQNYEL 234
Query: 240 VKYILEVGLAKVDKDYAGFSPILIKSAFTDKKSFFYMNRRDL 281
++Y+ ++ AK + DY GF+P+ + + D++ Y N RDL
Sbjct: 235 LRYMTDICSAKTNGDYEGFTPLRVSAP--DQQGNLYYNTRDL 274
>AT4G25434.2 | chr4:13004043-13005771 REVERSE LENGTH=305
Length = 304
Score = 283 bits (725), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/285 (50%), Positives = 184/285 (64%), Gaps = 32/285 (11%)
Query: 23 ELLPFVNDKHGGVIVEMTAPMDPQLFXXXXXXXXXXWREQGIRGVWIKLPISLANLIQYA 82
E+LPFV+D +GGVIVEM PMD + F WR QG +GVW+ LP+S NL++ A
Sbjct: 18 EVLPFVDDDYGGVIVEMKTPMDTKNFVAALRDSFEQWRLQGKKGVWLNLPLSHVNLVEPA 77
Query: 83 VEEGFWYHHAEETYLMLAYWLPATTHTLPVNATHRVGVGAFVMNDKREVLAVQEKSGVLR 142
V+EGF YHHAE TYLML YW+P T+P+NA+HRV VGA V+N +E EK G L
Sbjct: 78 VKEGFRYHHAEPTYLMLVYWIPEAESTIPLNASHRVRVGAVVLNHNKE-----EKYGSLC 132
Query: 143 GLGVWKFPTGVVEPGEDINLGAVREVKEETG---------------------------ID 175
G G+WK PTGVV+ GE+I A+REVKEETG ID
Sbjct: 133 GSGIWKIPTGVVDEGEEIFAAAIREVKEETGVRRSIYLNVNQSTINIYNLTFSYIYLQID 192
Query: 176 TEFVEVLAFRQSHKAFFDKSDLFFVCILRPLSFDITKQDSEIEAAQWMPVEEFAAQPFVQ 235
TEF+E+LAF Q+H++FF KSDLFFVC+LRP SFDI KQD EIEAAQWM E+ A+QP
Sbjct: 193 TEFLEILAFCQTHESFFAKSDLFFVCLLRPTSFDIQKQDLEIEAAQWMRFEDSASQPITH 252
Query: 236 KHELVKYILEVGLAKVDKDYAGFSPILIKSAFTDKKSFFYMNRRD 280
K++L K I + K++K Y+GFS I + F DK + Y+N+++
Sbjct: 253 KNDLFKDIHHICSMKMEKSYSGFSKKPITTFFDDKLGYLYLNKQE 297
>AT2G04450.1 | chr2:1543710-1545319 FORWARD LENGTH=284
Length = 283
Score = 257 bits (657), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/257 (50%), Positives = 174/257 (67%), Gaps = 4/257 (1%)
Query: 24 LLPFVNDKHGGVIVEMTAPMDPQLFXXXXXXXXXXWREQGIRGVWIKLPISLANLIQYAV 83
LL V D +GGV V +T PM + F W QG +G+W+KL L NLI A
Sbjct: 10 LLQGVPDNYGGVKVNLTEPMTIEDFVPKLRASLVYWSNQGTKGIWLKLADGLDNLIAPAK 69
Query: 84 EEGFWYHHAEETYLMLAYWLPATTHTLPVNATHRVGVGAFVMNDK-REVLAVQEKSGVLR 142
EGF HHAE Y ML W+ TLP NA+HR+GVGAFV+N K +EVL VQE G +
Sbjct: 70 AEGFVCHHAEREYTMLTSWIADVPSTLPANASHRIGVGAFVLNKKTKEVLVVQEIDGHFK 129
Query: 143 GLGVWKFPTGVVEPGEDINLGAVREVKEETGIDTEFVEVLAFRQSHKAFFD-KSDLFFVC 201
G GVWK PTGVV+ GE+I GA+REV+EETGI T+FVEVLAFR+SH+AF + K+D+FF+C
Sbjct: 130 GTGVWKLPTGVVKEGENIWEGALREVEEETGIKTKFVEVLAFRESHQAFLEIKTDIFFLC 189
Query: 202 ILRPLSFDITKQDSEIEAAQWMPVEEFAAQPFVQKHELVKYILEVGLAKVDK-DYAGFSP 260
L P +F+I KQDSEI AA+WMP+EE+ QP+ QK EL +++ + L ++ + +Y GFS
Sbjct: 190 ELEPTTFEIKKQDSEILAAKWMPIEEYVNQPWNQKKELFRFMANICLKRLQEMEYMGFSK 249
Query: 261 ILIKSAFTDKKSFFYMN 277
+L ++ + K+S+ Y N
Sbjct: 250 VLTTTS-SGKESYLYCN 265
>AT5G47240.1 | chr5:19183806-19185467 FORWARD LENGTH=370
Length = 369
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/261 (47%), Positives = 167/261 (63%), Gaps = 2/261 (0%)
Query: 24 LLPFVNDKHGGVIVEMTA-PMDPQLFXXXXXXXXXXWREQGIRGVWIKLPISLANLIQYA 82
LL +D++GGVIV+ P +P F WR +G +GVW+KLP+ + L+ A
Sbjct: 95 LLDAYDDEYGGVIVDHGKLPSNPYAFASMLRASLSDWRRKGKKGVWLKLPVEQSELVPIA 154
Query: 83 VEEGFWYHHAEETYLMLAYWLPATTHT-LPVNATHRVGVGAFVMNDKREVLAVQEKSGVL 141
++EGF YHHAE+ Y+ML YW+P + LP NA+H+VGVG FV+N +EVL VQEK
Sbjct: 155 IKEGFEYHHAEKGYVMLTYWIPEEEPSMLPANASHQVGVGGFVLNQHKEVLVVQEKYCAP 214
Query: 142 RGLGVWKFPTGVVEPGEDINLGAVREVKEETGIDTEFVEVLAFRQSHKAFFDKSDLFFVC 201
G+WK PTG + E+I GAVREVKEETG+DTEF EV+AFR +H F+KSDLFF+C
Sbjct: 215 SITGLWKLPTGFINESEEIFSGAVREVKEETGVDTEFSEVIAFRHAHNVAFEKSDLFFIC 274
Query: 202 ILRPLSFDITKQDSEIEAAQWMPVEEFAAQPFVQKHELVKYILEVGLAKVDKDYAGFSPI 261
+LRPLS I EI+AA+WMP+ EF QP ++ ++ K ++E+ A++ Y G SP
Sbjct: 275 MLRPLSDKIIIDALEIKAAKWMPLAEFVEQPMIRGDKMFKRVIEICEARLSHRYCGLSPH 334
Query: 262 LIKSAFTDKKSFFYMNRRDLD 282
+ S F K S Y N D D
Sbjct: 335 RLVSTFDGKPSSLYYNVVDDD 355
>AT4G12720.4 | chr4:7487716-7489557 FORWARD LENGTH=323
Length = 322
Score = 246 bits (627), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 174/298 (58%), Gaps = 43/298 (14%)
Query: 22 VELLPFVNDKHGGVIVEMTAPMDPQLFXXXXXXXXXXWREQGIRGVWIKLPISLANLIQY 81
+ LL D + GV V M PMD ++F WRE+G +G+WIKLP+ LANL++
Sbjct: 8 IPLLEGETDNYDGVTVTMVEPMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEA 67
Query: 82 AVEEGFWYHHAEETYLMLAYWLPATTHTLPVNATHRVGVGAFVMN-DKREVLAVQEKSGV 140
AV EGF YHHAE YLML W+ T T+P NA+H VG GA V+N + +EVL VQE+SG
Sbjct: 68 AVSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGF 127
Query: 141 LRGLGVWKFPTGVVEP----------------------------------------GEDI 160
+ VWK PTGV+ GEDI
Sbjct: 128 FKDKNVWKLPTGVINEELVVLRVVGELHKKVVLTSYRSIKCLLIICNDTKNETKRMGEDI 187
Query: 161 NLGAVREVKEETGIDTEFVEVLAFRQSHKAFF-DKSDLFFVCILRPLSFDITKQDSEIEA 219
G REV+EETGI +FVEVLAFRQSHKA K+D+FF+C+L P S+DIT+Q SEI
Sbjct: 188 WTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFLCVLSPRSYDITEQKSEILQ 247
Query: 220 AQWMPVEEFAAQPFVQKHELVKYILEVGLAKVDKDYAGFSPILIKSAFTDKKSFFYMN 277
A+WMP++E+ QP+ +K+E+ K++ + K +++Y GF+ I+ + + K+SF Y N
Sbjct: 248 AKWMPIQEYVDQPWNKKNEMFKFMANICQKKCEEEYLGFA-IVPTTTSSGKESFIYCN 304
>AT2G04430.1 | chr2:1538944-1541027 FORWARD LENGTH=303
Length = 302
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 160/247 (64%), Gaps = 5/247 (2%)
Query: 17 GSSVDVELLPFVNDKHGGVIVEM--TAPMDPQLFXXXXXXXXXXWREQGIRGVWIKLPIS 74
G + ++ LL D+ GG +V + M F W++QG +G+WIKLP
Sbjct: 22 GEAFEISLLDGEEDRFGGTVVNLMEVESMTIGDFDSKLDVSLKAWKDQGKKGIWIKLPSE 81
Query: 75 LANLIQYAVEEGFWYHHAEETYLMLAYWLPATTHTLPVNATHRVGVGAFVMNDKREVLAV 134
L++L+ A+++GF YHHAE Y+ML +WLP TLP NA+HR+G+GAFV+N E+L V
Sbjct: 82 LSSLVDTAIKKGFTYHHAENEYVMLTFWLPEPPSTLPCNASHRIGIGAFVLNKNGEMLVV 141
Query: 135 QEKSGVLRGLGVWKFPTGVVEPGEDINLGAVREVKEETGIDTEFVEVLAFRQSHKAFFD- 193
QE SG + VWK PTG ++ GE I GAVREVKEET ID EFVEVL+F +SH+A +
Sbjct: 142 QENSGYFKDKNVWKVPTGTIKEGESIWAGAVREVKEETDIDAEFVEVLSFMESHQAVWQR 201
Query: 194 KSDLFFVCILRPLSFDITKQDSEIEAAQWMPVEEFAAQPFVQK--HELVKYILEVGLAKV 251
K+D+FFVC L +F+I KQDSEI AA+WMPVEE+ QP+ K +E+ K I + L +
Sbjct: 202 KTDIFFVCELEARTFEIQKQDSEIHAAKWMPVEEYVNQPYHNKEGNEMFKLIANICLKRS 261
Query: 252 DKDYAGF 258
+ Y GF
Sbjct: 262 REKYTGF 268
>AT2G04440.1 | chr2:1541523-1542729 FORWARD LENGTH=216
Length = 215
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Query: 22 VELLPFVNDKHGGVIVEM--TAPMDPQLFXXXXXXXXXXWREQGIRGVWIKLPISLANLI 79
+ LL D++G V V + PM+ + F W++QG +G+WIKLP L++L+
Sbjct: 8 ISLLIGKEDRYGRVEVNLMEVEPMNAEDFNAKLDVSFKAWKDQGKKGIWIKLPCELSSLV 67
Query: 80 QYAVEEGFWYHHAEETYLMLAYWLPATTHTLPVNATHRVGVGAFVMNDKREVLAVQEKSG 139
A+++GF YHHAE Y +L+ W+ +T+P NA+HR+G+GA V+N REVLAVQE G
Sbjct: 68 DIAMKKGFTYHHAENEYAVLSSWISDLPNTIPANASHRIGIGALVLNKNREVLAVQEIDG 127
Query: 140 VLRGLGVWKFPTGVVEPGED 159
V + G+WK PTGV++ +
Sbjct: 128 VFKDTGLWKLPTGVIQENRE 147
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,815,892
Number of extensions: 228243
Number of successful extensions: 482
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 475
Number of HSP's successfully gapped: 8
Length of query: 303
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 205
Effective length of database: 8,419,801
Effective search space: 1726059205
Effective search space used: 1726059205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)