BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0633900 Os06g0633900|Os06g0633900
(389 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14390.1 | chr5:4637551-4639575 REVERSE LENGTH=370 392 e-109
AT3G30380.1 | chr3:11974424-11976571 FORWARD LENGTH=400 389 e-108
AT3G01690.1 | chr3:256753-258379 FORWARD LENGTH=362 382 e-106
AT4G24760.1 | chr4:12761482-12763564 REVERSE LENGTH=366 377 e-105
AT5G38220.1 | chr5:15269012-15271140 FORWARD LENGTH=337 344 4e-95
AT1G13610.1 | chr1:4664008-4665975 REVERSE LENGTH=359 337 6e-93
AT1G66900.1 | chr1:24959552-24961255 FORWARD LENGTH=273 310 8e-85
AT4G31020.2 | chr4:15108832-15110079 REVERSE LENGTH=295 309 1e-84
AT2G24320.1 | chr2:10345659-10346829 REVERSE LENGTH=287 303 1e-82
AT1G32190.1 | chr1:11593059-11595731 REVERSE LENGTH=423 275 3e-74
>AT5G14390.1 | chr5:4637551-4639575 REVERSE LENGTH=370
Length = 369
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/332 (61%), Positives = 235/332 (70%), Gaps = 38/332 (11%)
Query: 44 LSGVPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSH 103
++ P R VE +LPT RGTE+VAMYVR P A TLLYSHGNAADLGQMYELF+ELS H
Sbjct: 35 MNPFPHRENVEILKLPTRRGTEIVAMYVRHPMATSTLLYSHGNAADLGQMYELFIELSIH 94
Query: 104 LNVNLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTL 163
L VNLM KPSE +TY+DIEAAY+CL ETYGA +E+IILYGQSVGSGPTL
Sbjct: 95 LKVNLMGYDYSGYGQSTGKPSEHHTYADIEAAYKCLEETYGAKQEDIILYGQSVGSGPTL 154
Query: 164 DLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEV 223
DLA+RLP LRA VLHSPILSGLRVMYPVK TYWFDI+KNIDK+PLV CPVLVIHGT DEV
Sbjct: 155 DLAARLPQLRAAVLHSPILSGLRVMYPVKKTYWFDIFKNIDKIPLVNCPVLVIHGTCDEV 214
Query: 224 VDCSHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKLPPTKXXXXXX 283
VDCSHG+ LWELSK KYEPLW++GGNHC+LE YPEYIKHLKKF+ +E+
Sbjct: 215 VDCSHGKQLWELSKEKYEPLWLEGGNHCDLEHYPEYIKHLKKFITTVER----------- 263
Query: 284 XXXXXXXXIGSESMQSSRKSTDVKDKSRSSIDH-RHSVDRREKPRGSIDRRDK------- 335
SSR ST +K S ++ R SVDRREKPR S+D+R+K
Sbjct: 264 -------------DLSSRASTAQLEKQSSDLEMPRQSVDRREKPRQSVDKREKEKPPKGP 310
Query: 336 SRKSI------DHPDKPRASVDQPDRPRRSID 361
S+KS H D+ R SVD ++ R+S+D
Sbjct: 311 SKKSKLRITFEQHLDRTRRSVDFHEKARKSVD 342
>AT3G30380.1 | chr3:11974424-11976571 FORWARD LENGTH=400
Length = 399
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/372 (54%), Positives = 247/372 (66%), Gaps = 53/372 (14%)
Query: 50 RAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSHLNVNLM 109
+ VE +L T RG +VVA Y++ P A LTLLYSHGNAADLGQM+ELF ELS HL VNL+
Sbjct: 40 KENVEVLKLKTKRGNQVVAAYIKNPTASLTLLYSHGNAADLGQMFELFSELSLHLRVNLI 99
Query: 110 XXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTLDLASRL 169
KPSEQNTYSDIEA YRCL E YG E+++ILYGQSVGSGPTL+LASRL
Sbjct: 100 GYDYSGYGRSSGKPSEQNTYSDIEAVYRCLEEKYGVKEQDVILYGQSVGSGPTLELASRL 159
Query: 170 PHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEVVDCSHG 229
P+LRAVVLHS I SGLRVMYPVK TYWFDIYKN++K+ VKCPVLVIHGT+D+VV+ SHG
Sbjct: 160 PNLRAVVLHSAIASGLRVMYPVKRTYWFDIYKNVEKISFVKCPVLVIHGTSDDVVNWSHG 219
Query: 230 RALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKLPPTKXXXXXXXXXXXX 289
+ L+EL K KYEPLW+KGGNHC+LELYP+YIKHL+KFV AIEK P +
Sbjct: 220 KQLFELCKEKYEPLWIKGGNHCDLELYPQYIKHLRKFVSAIEKSPILRNGPVPLT----- 274
Query: 290 XXIGSESMQSSRKSTDVKDKSRSSIDHRH----SVDRREKP-------RGSIDRRDKSRK 338
+ +R STD+++ +R S D R S D+RE P R S+D+R+++R+
Sbjct: 275 --------EKARSSTDIREPARPSTDQRDKSRTSTDQREMPKLSTDIARASVDKRERTRR 326
Query: 339 SIDHPDKPRASVD----QPDRPRRSID----------------------RFGGMMRSVTS 372
S+D +KP S + QP++ R SID RFG M+RSV
Sbjct: 327 SVDGTEKPSNSAEQQLVQPEKGRNSIDRYISQSFYDVLMIMLLMIMYDNRFGEMIRSVG- 385
Query: 373 VKLCNIDCFKVT 384
CNIDCFK T
Sbjct: 386 --FCNIDCFKPT 395
>AT3G01690.1 | chr3:256753-258379 FORWARD LENGTH=362
Length = 361
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 231/346 (66%), Gaps = 51/346 (14%)
Query: 44 LSGVPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSH 103
LS P R VE +L T RGTE+V MYVR P A TLLYSHGNAADLGQMYELF+ELS H
Sbjct: 35 LSPFPHRENVEIVKLRTRRGTEIVGMYVRHPMATSTLLYSHGNAADLGQMYELFIELSIH 94
Query: 104 LNVNLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTL 163
L VNLM KPSE NTY+DIEA Y+CL ET+G+ +E +ILYGQSVGSGPTL
Sbjct: 95 LKVNLMGYDYSGYGQSTGKPSEHNTYADIEAVYKCLEETFGSKQEGVILYGQSVGSGPTL 154
Query: 164 DLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEV 223
DLASRLP LRAVVLHSPILSGLRVMY VK TYWFDIYKNIDK+P V CPVL+IHGT+DEV
Sbjct: 155 DLASRLPQLRAVVLHSPILSGLRVMYSVKKTYWFDIYKNIDKIPYVDCPVLIIHGTSDEV 214
Query: 224 VDCSHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKLPPTKXXXXXX 283
VDCSHG+ LWEL K KYEPLWVKGGNHC+LE YPEYI+HLKKF+ +E+LP
Sbjct: 215 VDCSHGKQLWELCKDKYEPLWVKGGNHCDLEHYPEYIRHLKKFIATVERLP--------- 265
Query: 284 XXXXXXXXIGSESMQSSRKSTDVKDKSRSSIDHRHSVDRREKPRGSIDRR---------- 333
R S+D ++ R + R S+DRR KPR S +RR
Sbjct: 266 ---------------CPRMSSDQSERVRDA-PPRRSMDRRVKPRQSTERREKEKPPKSQS 309
Query: 334 ----------------DKSRKSIDHPDKPRASVDQPDRPRRSIDRF 363
D+SR+S+D +K R SVDQ +R R+S+DR
Sbjct: 310 KMSSSSSKLKISFDQLDRSRRSVDCHEKTRKSVDQIERGRKSVDRL 355
>AT4G24760.1 | chr4:12761482-12763564 REVERSE LENGTH=366
Length = 365
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/322 (60%), Positives = 229/322 (71%), Gaps = 21/322 (6%)
Query: 44 LSGVPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSH 103
+S P R V+ RLPT RGTE+VAMY+R P A TLLYSHGNAAD+GQMYELF+ELS H
Sbjct: 35 MSPFPHRENVDILRLPTRRGTEIVAMYIRYPMAVTTLLYSHGNAADIGQMYELFIELSIH 94
Query: 104 LNVNLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTL 163
L VNLM KP+EQNTY+DIEAAY+CL E YGA +ENIILYGQSVGSGPT+
Sbjct: 95 LRVNLMGYDYSGYGQSSGKPTEQNTYADIEAAYKCLEENYGAKQENIILYGQSVGSGPTV 154
Query: 164 DLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEV 223
DLA+RLP LRA +LHSPILSGLRVMYPVK TYWFDIYKNIDK+ LV+CPVLVIHGTAD+V
Sbjct: 155 DLAARLPRLRASILHSPILSGLRVMYPVKRTYWFDIYKNIDKITLVRCPVLVIHGTADDV 214
Query: 224 VDCSHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKLPPTKXXXXXX 283
VD SHG+ LWEL + KYEPLW+KGGNHC+LEL+PEYI HLKKFV A+EK +
Sbjct: 215 VDFSHGKQLWELCQEKYEPLWLKGGNHCDLELFPEYIGHLKKFVSAVEKSASKR------ 268
Query: 284 XXXXXXXXIGSESMQSSRKSTDVKDKSRSSIDH-RHSVDRREKPRGSIDR-RDKSRK--S 339
S S R + R S+D R S D REKPR SIDR R + K
Sbjct: 269 -----------NSSFSRRSMEGCEQPPRHSVDAPRKSKDGREKPRKSIDRLRFQGYKLSH 317
Query: 340 IDHPDKPRASVDQPDRPRRSID 361
I+ P+K + ++ +R RRS+D
Sbjct: 318 IEKPEKLKVPFEEMERSRRSVD 339
>AT5G38220.1 | chr5:15269012-15271140 FORWARD LENGTH=337
Length = 336
Score = 344 bits (883), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 173/317 (54%), Positives = 217/317 (68%), Gaps = 14/317 (4%)
Query: 44 LSGVPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSH 103
++ VPRR V+ +L T RG E+VA+Y++ P A TLLYSHGNAADLGQM+ELF+ELS+
Sbjct: 33 ITEVPRRDDVDVLKLKTRRGNEIVAIYIKHPKANGTLLYSHGNAADLGQMFELFIELSNR 92
Query: 104 LNVNLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTL 163
L +NLM K SE NTY+DI+AAY CL E YG ++ +ILYGQSVGSGPT+
Sbjct: 93 LRLNLMGYDYSGYGQSTGKASECNTYADIDAAYTCLKEHYGVKDDQLILYGQSVGSGPTI 152
Query: 164 DLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEV 223
DLASR P+LR VVLHSPILSG+RV+YPVK TYWFDIYKNIDK+ V CPVLVIHGTADEV
Sbjct: 153 DLASRTPNLRGVVLHSPILSGMRVLYPVKRTYWFDIYKNIDKIGAVTCPVLVIHGTADEV 212
Query: 224 VDCSHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKLPPTKXXXXXX 283
VDCSHG+ LWELSK KYEPLWV GG HCNLELYPE+IKHLKK+V++I K P T
Sbjct: 213 VDCSHGKQLWELSKEKYEPLWVSGGGHCNLELYPEFIKHLKKYVISISKGPRTGSNK--- 269
Query: 284 XXXXXXXXIGSESMQSSRKSTDVKDKSRSSIDHRHSVDRREKPRGSIDRRDKSRKSIDHP 343
+ + +++K + + R+ + E R S+D + + K P
Sbjct: 270 ----------TATTDAAKKQSKPAENGRADT-FQLGCCLPEVSRNSVDSQLEKSKKTSKP 318
Query: 344 DKPRASVDQPDRPRRSI 360
+K R S+D+ R + S+
Sbjct: 319 EKSRMSIDRFRRKKGSV 335
>AT1G13610.1 | chr1:4664008-4665975 REVERSE LENGTH=359
Length = 358
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 184/340 (54%), Positives = 227/340 (66%), Gaps = 29/340 (8%)
Query: 49 RRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSHLNVNL 108
R +E ++ T RG E+VAMYV+ P A+LT+L+SHGNA+DL Q++ + EL LNVNL
Sbjct: 44 RDENIEVVKIRTKRGNEIVAMYVKNPTAKLTVLFSHGNASDLAQIFYILAELI-QLNVNL 102
Query: 109 MXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTLDLASR 168
M KPSEQ+TY+DIEAAY L +TYG +E IILYGQSVGSGP+L+LASR
Sbjct: 103 MGYDYSGYGQSSGKPSEQDTYADIEAAYNWLRQTYGTKDERIILYGQSVGSGPSLELASR 162
Query: 169 LPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEVVDCSH 228
LP LRA+VLHSP LSGLRVMYPVKH++ FDIYKNIDK+ LV+CPVLVIHGT D+VV+ SH
Sbjct: 163 LPRLRALVLHSPFLSGLRVMYPVKHSFPFDIYKNIDKIHLVECPVLVIHGTDDDVVNISH 222
Query: 229 GRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKLPPTKXXXXXXXXXXX 288
G+ LW L K KYEPLW+KG H ++E+ PEY+ HL+KF+ AIEKLP K
Sbjct: 223 GKHLWGLCKEKYEPLWLKGRGHSDIEMSPEYLPHLRKFISAIEKLPVPK----------- 271
Query: 289 XXXIGSESMQSSRKSTDVKDKSRSSIDHRHSVDRREKPRGSIDRRDKSRK-SIDHP-DKP 346
+S+ + K+ K S I RHS++ + RDKSRK SIDH KP
Sbjct: 272 ---FRRQSLANDHKND--KSTKSSWIGSRHSIE-------CVPPRDKSRKISIDHRFGKP 319
Query: 347 RASVDQPDRPRRSIDRFGGMMRSVTSVKLCNIDCFKVTYA 386
R SV DR R S DR G M+R SV+LCN+DC K A
Sbjct: 320 RNSVGSSDRARNSFDRLGEMVR---SVRLCNVDCVKNAVA 356
>AT1G66900.1 | chr1:24959552-24961255 FORWARD LENGTH=273
Length = 272
Score = 310 bits (794), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 147/224 (65%), Positives = 177/224 (79%)
Query: 47 VPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSHLNV 106
+PRR V+ +L T G E+VA+YV+ A TLLYSHGNAADLGQM+ELFVELS+ L V
Sbjct: 39 IPRRDDVDILKLRTRCGNEIVAVYVKHSKANGTLLYSHGNAADLGQMFELFVELSNRLRV 98
Query: 107 NLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTLDLA 166
NLM + SE NTY+DIEA+Y+CL E YG ++ +I+YGQSVGSGPT+DLA
Sbjct: 99 NLMGYDYSGYGQSTGQASECNTYADIEASYKCLKEKYGVKDDQLIVYGQSVGSGPTVDLA 158
Query: 167 SRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEVVDC 226
SR P+LR VVL PILSG+RV+YPVK TYWFDIYKNIDK+ V CPVLVIHGTADEVVD
Sbjct: 159 SRTPNLRGVVLQCPILSGMRVLYPVKCTYWFDIYKNIDKIGSVTCPVLVIHGTADEVVDW 218
Query: 227 SHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAI 270
SHG+ LWELSK KYEPLW+ GG HC+LELYP++I+HLKKFV+++
Sbjct: 219 SHGKRLWELSKEKYEPLWISGGGHCDLELYPDFIRHLKKFVVSL 262
>AT4G31020.2 | chr4:15108832-15110079 REVERSE LENGTH=295
Length = 294
Score = 309 bits (792), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/238 (64%), Positives = 172/238 (72%), Gaps = 4/238 (1%)
Query: 44 LSGVPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSH 103
+GV VE +L T G +VVA + R P AR TLLYSHGNAADLGQM ELF+EL +H
Sbjct: 35 FAGVSADKNVEVHQLTTKSGNKVVATFWRHPFARFTLLYSHGNAADLGQMVELFIELRAH 94
Query: 104 LNVNLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTL 163
L VN+M KPSE NTY DIEA Y CL YG +E IILYGQSVGSGPTL
Sbjct: 95 LRVNIMSYDYSGYGASTGKPSEFNTYYDIEAVYSCLRSDYGIKQEEIILYGQSVGSGPTL 154
Query: 164 DLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEV 223
+ASRL LR VVLHS ILSG+RV+YPVK T WFDI+KNIDK+ V VLVIHGT DE+
Sbjct: 155 HMASRLKRLRGVVLHSAILSGIRVLYPVKMTLWFDIFKNIDKIRHVNSQVLVIHGTNDEI 214
Query: 224 VDCSHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKL----PPTK 277
VD SHG+ LWEL+K KY+PLWVKGG HCNLE YPEYIKHLKKFV A+EKL PP K
Sbjct: 215 VDLSHGKRLWELAKEKYDPLWVKGGGHCNLETYPEYIKHLKKFVNAMEKLSLTNPPPK 272
>AT2G24320.1 | chr2:10345659-10346829 REVERSE LENGTH=287
Length = 286
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 175/238 (73%), Gaps = 4/238 (1%)
Query: 44 LSGVPRRAGVEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSH 103
+G+ ++ +L T G +V+A + + P +R TLLYSHGNAADLGQM +LF+EL +H
Sbjct: 27 FTGITPEKSMDVHQLTTKSGNKVIATFWKHPFSRFTLLYSHGNAADLGQMVDLFIELRAH 86
Query: 104 LNVNLMXXXXXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTL 163
L VN+M KP+E NTY DIEA Y CL YG +E +ILYGQSVGSGPTL
Sbjct: 87 LRVNIMSYDYSGYGASTGKPTELNTYYDIEAVYNCLRTEYGIMQEEMILYGQSVGSGPTL 146
Query: 164 DLASRLPHLRAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEV 223
LASR+ LR +VLHS ILSGLRV+YPVK T+WFD+YKNIDK+ V CPVLVIHGT D++
Sbjct: 147 HLASRVKRLRGIVLHSAILSGLRVLYPVKMTFWFDMYKNIDKIRHVTCPVLVIHGTKDDI 206
Query: 224 VDCSHGRALWELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIEKL----PPTK 277
V+ SHG+ LWEL+K KY+PLWVKGG HCNLE YPEYIKH++KF+ A+EKL PP K
Sbjct: 207 VNMSHGKRLWELAKDKYDPLWVKGGGHCNLETYPEYIKHMRKFMNAMEKLALNNPPNK 264
>AT1G32190.1 | chr1:11593059-11595731 REVERSE LENGTH=423
Length = 422
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 164/219 (74%)
Query: 53 VEARRLPTGRGTEVVAMYVRQPGARLTLLYSHGNAADLGQMYELFVELSSHLNVNLMXXX 112
++ + + T RG +V A Y+R P ARLTLLYSHGNAADLGQ+++LFV+L +L VNLM
Sbjct: 53 LDVKVVKTRRGNKVTAFYLRNPNARLTLLYSHGNAADLGQLFDLFVQLKVNLRVNLMGYD 112
Query: 113 XXXXXXXXXKPSEQNTYSDIEAAYRCLVETYGATEENIILYGQSVGSGPTLDLASRLPHL 172
KPSE +TY+DIEAAY CL YG +E++ILYGQSVGSGPTL LAS+LP L
Sbjct: 113 YSGYGASTGKPSEYDTYADIEAAYECLQTDYGVGQEDLILYGQSVGSGPTLHLASKLPRL 172
Query: 173 RAVVLHSPILSGLRVMYPVKHTYWFDIYKNIDKVPLVKCPVLVIHGTADEVVDCSHGRAL 232
R VVLHS ILSGLRV+ VK + DIY N++K+ VKCPVLVIHGT D+VV+ HG L
Sbjct: 173 RGVVLHSGILSGLRVLCHVKFKFCCDIYSNVNKIKKVKCPVLVIHGTEDDVVNWLHGNRL 232
Query: 233 WELSKIKYEPLWVKGGNHCNLELYPEYIKHLKKFVMAIE 271
W+++K YEPLW+KGG HCNLE+YP+YI+HL +F+ +E
Sbjct: 233 WKMAKEPYEPLWIKGGGHCNLEIYPDYIRHLYRFIQDME 271
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,068,629
Number of extensions: 273575
Number of successful extensions: 898
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 870
Number of HSP's successfully gapped: 10
Length of query: 389
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 289
Effective length of database: 8,364,969
Effective search space: 2417476041
Effective search space used: 2417476041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)