BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0614300 Os06g0614300|AK070178
         (581 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G57890.2  | chr3:21438271-21441695 FORWARD LENGTH=610          619   e-177
AT2G42230.2  | chr2:17593705-17596563 REVERSE LENGTH=569          613   e-176

>AT3G57890.2 | chr3:21438271-21441695 FORWARD LENGTH=610
          Length = 609

 Score =  619 bits (1595), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/603 (53%), Positives = 395/603 (65%), Gaps = 78/603 (12%)

Query: 33  LRPRRVAFEHGLLPIPKLVFPEGTLTQTLAQTKERLIXXXXXXXXXXXXPRVGAAALAEA 92
           + PRRV+FEHGLLPI KLVF +    QTLA  K++L              RVG+AA+A+ 
Sbjct: 31  IHPRRVSFEHGLLPIQKLVFTDPI--QTLAPVKQKLADAASNN-------RVGSAAIADV 81

Query: 93  LQIPREXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXFLYIQSYKRLVPRA 141
           LQI  +                                        FLYIQSYK+L+PR 
Sbjct: 82  LQISGDHARLVLETLGSVLHSESDPLVRAKPEEVDSVGADLRDLILFLYIQSYKKLLPRT 141

Query: 142 HKDSPAVTDVWPSTSAFDGYLSALSPIQ-------------------------------- 169
           HKDS AV DVWPSTSAFDGYLSALSPIQ                                
Sbjct: 142 HKDSAAVADVWPSTSAFDGYLSALSPIQSCNILFPVWYGCSIESFRKQSYNLKLFSVFYS 201

Query: 170 ----LVRSNSRRFMPSQADEEAHQLSYLQKHMVNILSLLADSVDGEGDESMVLTAETFEH 225
               LVRSNSRRFMPSQAD+EAHQLSYLQKH+ NI+SLLA+ V+GEGDES+V + E FEH
Sbjct: 202 HCSLLVRSNSRRFMPSQADDEAHQLSYLQKHLANIISLLAEPVEGEGDESLVFSMEAFEH 261

Query: 226 LGFLFQF----SEGTPLSQVATFFANSXXXXXXXXXXXXQVHDWILQNIAASLENTAEKL 281
           L FL QF    S+ +PLSQ   FFANS            QVHDW+LQNIA++LE+  E++
Sbjct: 262 LRFLVQFGDKGSDVSPLSQATPFFANSDPDMPAVPVPASQVHDWLLQNIASALESITERI 321

Query: 282 TAKENSQQSASDPDVTMAEAVTNSRIHSSSPTGTAVPNNQG-HYRNTTFLEGFSKTSVVK 340
           + KEN    ++D D  M++               A PN      R    +EG SKTS+VK
Sbjct: 322 SGKENG--PSNDQDDAMSDVC-------------AAPNKVAPSTRGPCLIEGVSKTSLVK 366

Query: 341 QASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDTTIVLGAVGKVVKVEHCERVQIIA 400
           QASD++G S+KV+NCHDSVIY+LAP++YATV+GCSDTTIVLGAVGK +KVEHCERV +I 
Sbjct: 367 QASDLRGRSVKVVNCHDSVIYLLAPLRYATVHGCSDTTIVLGAVGKAIKVEHCERVHVIV 426

Query: 401 ASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLVQVGVDSNINKW 460
           A+KR+CIANCREC+F+LGVN +PLIVGDNHKLQVAP+NT+Y  L EH+ +VG++  INKW
Sbjct: 427 AAKRVCIANCRECVFFLGVNQRPLIVGDNHKLQVAPYNTFYSHLEEHMREVGLEPTINKW 486

Query: 461 DQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLFTNFLIPSWFEAQ--GPTKYNPFT 518
           D+P  LG VDPHDSLSHPAGV+D QAESA  +DPD F NFLIP+WF     G TK NPF 
Sbjct: 487 DKPLALGAVDPHDSLSHPAGVADAQAESAASVDPDQFVNFLIPNWFSGAELGSTKDNPFP 546

Query: 519 LPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELASALHAQFKDWLYASGNIRQLYCL 578
           LP+ Y A+Q++   + E+ +++++E  L++ RK+EL+SALH  FKDWLYASGNIRQLYCL
Sbjct: 547 LPDAYMAAQQRNLKNFEETRRSLKEAPLEENRKRELSSALHVYFKDWLYASGNIRQLYCL 606

Query: 579 QGE 581
           QG+
Sbjct: 607 QGD 609



>AT2G42230.2 | chr2:17593705-17596563 REVERSE LENGTH=569
          Length = 568

 Score =  613 bits (1581), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 309/566 (54%), Positives = 386/566 (68%), Gaps = 38/566 (6%)

Query: 33  LRPRRVAFEHGLLPIPKLVFPEGTLTQTLAQTKERLIXXXXXXXXXXXXPRVGAAALAEA 92
           + PRRV FEHGLLPI KLVF +    QTLA  K++L              RVG+AA+++A
Sbjct: 24  IHPRRVPFEHGLLPIQKLVFTDPI--QTLAPIKQKLASLATNH-------RVGSAAISDA 74

Query: 93  LQIPREXXXXXXXXXXX-----------XXXXXXXXXXXXXXXXXXFLYIQSYKRLVPRA 141
           L I  +                                        FLYIQSYK+L+PR 
Sbjct: 75  LSISDDHARLVLETLSSVLHCETDPLVLAKPEEVDSVGADLRDLILFLYIQSYKKLLPRT 134

Query: 142 HKDSPAVTDVWPSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEEAHQLSYLQKHMVNIL 201
           HKDS +V DVWPSTSAFDGYLSALSPIQLVRSNSRRFMPS  DEEAHQLSYLQKH+ NI+
Sbjct: 135 HKDSASVADVWPSTSAFDGYLSALSPIQLVRSNSRRFMPSPTDEEAHQLSYLQKHIANII 194

Query: 202 SLLADSVDGEGDESMVLTAETFEHLGFLFQFSEGT----PLSQVATFFANSXXXXXXXXX 257
           SLLA+ V+G+GD+S+VL+ E+ EH+GFL  + +       LSQ   FFANS         
Sbjct: 195 SLLAEPVEGQGDDSLVLSMESLEHIGFLVHYGDKGFDVPSLSQATPFFANSDPDMPAVPV 254

Query: 258 XXXQVHDWILQNIAASLENTAEKLTAKENSQQSASDPDVTMAEAVTNSRIHSSSPTGTAV 317
              QV+DW+L++IA++LE+ + +++ KEN   +ASD +  MA+         SS     V
Sbjct: 255 PASQVNDWLLKDIASALESISNRISGKENGASNASDQNAAMAD---------SSVALNKV 305

Query: 318 PNNQGHYRNTTFLEGFSKTSVVKQASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDT 377
            +N    R    +EG SKTS+ KQASD+KG S+KV NCHDSVIY+LAP++YATVYGCSD+
Sbjct: 306 SSND---RGPCIIEGVSKTSLFKQASDLKGRSVKVANCHDSVIYLLAPLRYATVYGCSDS 362

Query: 378 TIVLGAVGKVVKVEHCERVQIIAASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPF 437
           TIVLGA GK VKVEHCERV +I A+KRICIANCREC+F+LGVN +PLIVGDNHKLQVAP+
Sbjct: 363 TIVLGAAGKAVKVEHCERVHVIVATKRICIANCRECVFFLGVNQRPLIVGDNHKLQVAPY 422

Query: 438 NTYYPQLGEHLVQVGVDSNINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLF 497
           NT+Y  L EH+ +VG+   INKW++   LG +DPHDSLSHP G SD QAE A+C+DPD F
Sbjct: 423 NTFYSHLEEHITEVGIQPTINKWNESLALGAIDPHDSLSHPTGASDKQAEPASCVDPDQF 482

Query: 498 TNFLIPSWF--EAQGPTKYNPFTLPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELA 555
           T FLIP+WF  EA G TK NPF LP+ Y A Q+    +LE+ ++++RE  L++ RK+EL 
Sbjct: 483 TTFLIPNWFAGEAIGSTKDNPFPLPDAYKAVQQTNLKNLEETRQSLRETPLEENRKRELT 542

Query: 556 SALHAQFKDWLYASGNIRQLYCLQGE 581
           +A H  FKDWLYA+GNIRQLYCLQG+
Sbjct: 543 TAFHMYFKDWLYATGNIRQLYCLQGD 568



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.132    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,425,215
Number of extensions: 404100
Number of successful extensions: 1039
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1033
Number of HSP's successfully gapped: 5
Length of query: 581
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 477
Effective length of database: 8,255,305
Effective search space: 3937780485
Effective search space used: 3937780485
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)