BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0611900 Os06g0611900|AY495085
         (892 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33010.1  | chr4:15926852-15931150 REVERSE LENGTH=1038        1195   0.0  
AT2G26080.1  | chr2:11109330-11113786 REVERSE LENGTH=1045        1195   0.0  

>AT4G33010.1 | chr4:15926852-15931150 REVERSE LENGTH=1038
          Length = 1037

 Score = 1195 bits (3092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/697 (81%), Positives = 621/697 (89%), Gaps = 4/697 (0%)

Query: 50  HQYTTGRRPVSASALQPSDTFPRRHNSATPAEQAAMASECGFGTVDALIDATVPAAIRAP 109
           HQ T   R +S  A++PSDTFPRRHNSATP EQ  MA  CGF  +D+LIDATVP +IR  
Sbjct: 62  HQQT---RSISVDAVKPSDTFPRRHNSATPDEQTHMAKFCGFDHIDSLIDATVPKSIRLD 118

Query: 110 EMRFSGRFDAGFTESEMIEHMQRLAAMNRAYKSFIGMGYYNTHVPAVILRNLMENPAWYT 169
            M+FS +FDAG TES+MI+HM  LA+ N+ +KSFIGMGYYNTHVP VILRN+MENPAWYT
Sbjct: 119 SMKFS-KFDAGLTESQMIQHMVDLASKNKVFKSFIGMGYYNTHVPTVILRNIMENPAWYT 177

Query: 170 QYTPYQAEIAQGRLESLLNYQTMVADLTGLPMSNASLLDXXXXXXXXXXXCNGILKSKKK 229
           QYTPYQAEI+QGRLESLLN+QT++ DLTGLPMSNASLLD           CN ILK KKK
Sbjct: 178 QYTPYQAEISQGRLESLLNFQTVITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKK 237

Query: 230 TFLIASNCHPQTIDVCQTRAAGFDLNVVVADAKDFDYGSGDVCGVLVQYPGTEGEVLDYA 289
           TF+IASNCHPQTIDVC+TRA GFDL VV +D KD DY SGDVCGVLVQYPGTEGEVLDYA
Sbjct: 238 TFVIASNCHPQTIDVCKTRADGFDLKVVTSDLKDIDYSSGDVCGVLVQYPGTEGEVLDYA 297

Query: 290 EFVRDAHAHGVKVVMATDLLALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATS 349
           EFV++AHA+GVKVVMATDLLALT L+PPGE GADI VGSAQRFGVPMGYGGPHAAFLATS
Sbjct: 298 EFVKNAHANGVKVVMATDLLALTVLKPPGEFGADIVVGSAQRFGVPMGYGGPHAAFLATS 357

Query: 350 QEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 409
           QEYKR+MPGRIIG+SVDSSGK ALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAV
Sbjct: 358 QEYKRMMPGRIIGISVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 417

Query: 410 YHGPEGLKAIADRVHGLAGTFAQGLKKLGTVTVQELPFFDTVKVKVADANAIAQEACKNE 469
           YHGP GLK+IA RVHGLAG F+ GL KLG   VQELPFFDTVK+K +DA+AIA  A K+E
Sbjct: 418 YHGPAGLKSIAQRVHGLAGIFSLGLNKLGVAEVQELPFFDTVKIKCSDAHAIADAASKSE 477

Query: 470 MNLRVVDATTITVAFDETTTLEDVDKLFKVFNGGKPVNFTAESLAPEVSSSIPSSLVRKS 529
           +NLRVVD+TTIT +FDETTTL+DVDKLFKVF  GKPV FTAESLAPEV +SIPSSL R+S
Sbjct: 478 INLRVVDSTTITASFDETTTLDDVDKLFKVFASGKPVPFTAESLAPEVQNSIPSSLTRES 537

Query: 530 PYLTHPIFNMYHTEHELLRYLYKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTYPNFA 589
           PYLTHPIFNMYHTEHELLRY++KLQSKDLSLCHSMIPLGSCTMKLNAT EMMPVT+P+F 
Sbjct: 538 PYLTHPIFNMYHTEHELLRYIHKLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFT 597

Query: 590 NMHPFAPTDQAAGYHEMFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAYHRARG 649
           ++HPFAP +QA GY EMF++LGDLLC ITGFDSFSLQPNAGA+GEYAGLMVIRAYH +RG
Sbjct: 598 DIHPFAPVEQAQGYQEMFENLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMSRG 657

Query: 650 DYHRDVCIIPVSAHGTNPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNLAALMV 709
           D+HR+VCIIPVSAHGTNPASAAMCGMKI+ VGTD+KGNINIEE+RKAAEANKDNLAALMV
Sbjct: 658 DHHRNVCIIPVSAHGTNPASAAMCGMKIITVGTDAKGNINIEEVRKAAEANKDNLAALMV 717

Query: 710 TYPSTHGVYEEGIDEICMIIHENGGQVYMDGANMNAQ 746
           TYPSTHGVYEEGIDEIC IIHENGGQVYMDGANMNAQ
Sbjct: 718 TYPSTHGVYEEGIDEICNIIHENGGQVYMDGANMNAQ 754




 Score =  196 bits (499), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 103/157 (65%), Positives = 105/157 (66%), Gaps = 25/157 (15%)

Query: 746  QKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLM 805
            +KHYPVLFRGVNGTVAHEFIIDLRGFK TAGIEPEDVAKRLMDYGFH PTMSWPVPGTLM
Sbjct: 868  EKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 927

Query: 806  IEPTESESKAELDRFCDALXXXXXXXXXXXXGKADVNNNVLK--------------VKYY 851
            IEPTESESKAELDRFCDAL            G ADV NNVLK               K Y
Sbjct: 928  IEPTESESKAELDRFCDALISIREEIAQIEKGNADVQNNVLKGAPHPPSLLMADTWKKPY 987

Query: 852  ---YTAIC--------FHILDCRVDNVYGDRNLICTL 877
               Y A          F     RVDNVYGDR L+CTL
Sbjct: 988  SREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKLVCTL 1024



>AT2G26080.1 | chr2:11109330-11113786 REVERSE LENGTH=1045
          Length = 1044

 Score = 1195 bits (3092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/699 (81%), Positives = 616/699 (88%), Gaps = 5/699 (0%)

Query: 53  TTGR-----RPVSASALQPSDTFPRRHNSATPAEQAAMASECGFGTVDALIDATVPAAIR 107
           T+GR     R +S  AL+PSDTFPRRHNSATP EQA MA+ CGF  ++ LID+TVP +IR
Sbjct: 62  TSGRNQHQTRSISVDALKPSDTFPRRHNSATPDEQAQMANYCGFDNLNTLIDSTVPKSIR 121

Query: 108 APEMRFSGRFDAGFTESEMIEHMQRLAAMNRAYKSFIGMGYYNTHVPAVILRNLMENPAW 167
              M+FSG FD G TES+MIEHM  LA+ N+ +KSFIGMGYYNTHVP VILRN+MENPAW
Sbjct: 122 LDSMKFSGIFDEGLTESQMIEHMSDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAW 181

Query: 168 YTQYTPYQAEIAQGRLESLLNYQTMVADLTGLPMSNASLLDXXXXXXXXXXXCNGILKSK 227
           YTQYTPYQAEI+QGRLESLLNYQT++ DLTGLPMSNASLLD           CN ILK K
Sbjct: 182 YTQYTPYQAEISQGRLESLLNYQTVITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGK 241

Query: 228 KKTFLIASNCHPQTIDVCQTRAAGFDLNVVVADAKDFDYGSGDVCGVLVQYPGTEGEVLD 287
           KKTF+IASNCHPQTIDVC+TRA GFDL VV  D KD DY SGDVCGVLVQYPGTEGEVLD
Sbjct: 242 KKTFVIASNCHPQTIDVCKTRADGFDLKVVTVDIKDVDYSSGDVCGVLVQYPGTEGEVLD 301

Query: 288 YAEFVRDAHAHGVKVVMATDLLALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLA 347
           Y EFV++AHA+GVKVVMATDLLALT L+PPGE GADI VGS QRFGVPMGYGGPHAAFLA
Sbjct: 302 YGEFVKNAHANGVKVVMATDLLALTMLKPPGEFGADIVVGSGQRFGVPMGYGGPHAAFLA 361

Query: 348 TSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMY 407
           TSQEYKR+MPGRIIGVSVDSSGK ALRMAMQTREQHIRRDKATSNICTAQALLANM AMY
Sbjct: 362 TSQEYKRMMPGRIIGVSVDSSGKQALRMAMQTREQHIRRDKATSNICTAQALLANMTAMY 421

Query: 408 AVYHGPEGLKAIADRVHGLAGTFAQGLKKLGTVTVQELPFFDTVKVKVADANAIAQEACK 467
           AVYHGPEGLK+IA RVHGLAG FA GLKKLGT  VQ+LPFFDTVKV  +DA AI   A K
Sbjct: 422 AVYHGPEGLKSIAQRVHGLAGVFALGLKKLGTAQVQDLPFFDTVKVTCSDATAIFDVAAK 481

Query: 468 NEMNLRVVDATTITVAFDETTTLEDVDKLFKVFNGGKPVNFTAESLAPEVSSSIPSSLVR 527
            E+NLR+VD+ TITVAFDETTTL+DVDKLF+VF  GKPV FTAESLAPE +++IPSSL R
Sbjct: 482 KEINLRLVDSNTITVAFDETTTLDDVDKLFEVFASGKPVQFTAESLAPEFNNAIPSSLTR 541

Query: 528 KSPYLTHPIFNMYHTEHELLRYLYKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTYPN 587
           +SPYLTHPIFNMYHTEHELLRY++KLQ+KDLSLCHSMIPLGSCTMKLNAT EMMPVT+P+
Sbjct: 542 ESPYLTHPIFNMYHTEHELLRYIHKLQNKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPS 601

Query: 588 FANMHPFAPTDQAAGYHEMFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAYHRA 647
           F NMHPFAP +QA GY EMF +LG+LLC ITGFDSFSLQPNAGA+GEYAGLMVIRAYH +
Sbjct: 602 FTNMHPFAPVEQAQGYQEMFTNLGELLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHMS 661

Query: 648 RGDYHRDVCIIPVSAHGTNPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNLAAL 707
           RGD+HR+VCIIPVSAHGTNPASAAMCGMKIVAVGTD+KGNINIEELR AAEANKDNLAAL
Sbjct: 662 RGDHHRNVCIIPVSAHGTNPASAAMCGMKIVAVGTDAKGNINIEELRNAAEANKDNLAAL 721

Query: 708 MVTYPSTHGVYEEGIDEICMIIHENGGQVYMDGANMNAQ 746
           MVTYPSTHGVYEEGIDEIC IIHENGGQVYMDGANMNAQ
Sbjct: 722 MVTYPSTHGVYEEGIDEICNIIHENGGQVYMDGANMNAQ 760




 Score =  199 bits (507), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 104/162 (64%), Positives = 108/162 (66%), Gaps = 25/162 (15%)

Query: 746  QKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLM 805
            + HYPVLFRGVNGTVAHEFIIDLRGFK TAGIEPEDVAKRLMDYGFH PTMSWPVPGTLM
Sbjct: 874  ESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 933

Query: 806  IEPTESESKAELDRFCDALXXXXXXXXXXXXGKADVNNNVLK--------------VKYY 851
            IEPTESESKAELDRFCDAL            G AD NNNVLK               K Y
Sbjct: 934  IEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNVLKGAPHPPSLLMADTWKKPY 993

Query: 852  ---YTAIC--------FHILDCRVDNVYGDRNLICTLQQGSQ 882
               Y A          F     RVDNVYGDRNL+CTLQ  ++
Sbjct: 994  SREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQPANE 1035



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,284,607
Number of extensions: 707807
Number of successful extensions: 1555
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1554
Number of HSP's successfully gapped: 4
Length of query: 892
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 785
Effective length of database: 8,173,057
Effective search space: 6415849745
Effective search space used: 6415849745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)