BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0595900 Os06g0595900|AK066655
(629 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11430.1 | chr5:3648469-3652256 FORWARD LENGTH=874 389 e-108
AT5G25520.2 | chr5:8885550-8889484 FORWARD LENGTH=998 349 2e-96
AT2G25640.1 | chr2:10910836-10913908 FORWARD LENGTH=746 348 4e-96
AT3G29639.1 | chr3:11478732-11479733 REVERSE LENGTH=182 76 7e-14
AT2G38560.1 | chr2:16134802-16136319 FORWARD LENGTH=379 59 1e-08
AT2G42730.1 | chr2:17787454-17791218 REVERSE LENGTH=738 54 3e-07
AT4G18720.1 | chr4:10299945-10301228 FORWARD LENGTH=267 52 9e-07
>AT5G11430.1 | chr5:3648469-3652256 FORWARD LENGTH=874
Length = 873
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 254/586 (43%), Positives = 332/586 (56%), Gaps = 85/586 (14%)
Query: 63 DDGAAEEKKSVTQKAQILAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRV 122
D G EK Q ++LA +IE EL+ L GGVNKKY+E+GRSLLFNLKDK+NP LR RV
Sbjct: 249 DYGTGGEKS--FQDPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERV 306
Query: 123 LSGDITPKRLCSMTTEELASKELSDWRLAKAEELAKMVVLPSKEVDVRRLVRKTHKGEFQ 182
+S +I+ +RLCSMT EELASKELS WR AKAEE+AKMVVL ++DVR LVRKTHKGEFQ
Sbjct: 307 MSEEISAERLCSMTAEELASKELSQWRQAKAEEMAKMVVLQDTDIDVRSLVRKTHKGEFQ 366
Query: 183 VEVEETDGISVEVGIGGDLLSHVPSRPTEGQTKTDDKSVHTEEKESDNSEQDGVIVTGGN 242
VE+E D +V+V G ++S RP + SV T K+ +
Sbjct: 367 VEIEPVDRGTVDV--SGGIMSRSKRRP-----RAKSHSVKTALKDE---------AAKAD 410
Query: 243 NMPSNLEHTENEKTDLMQELMVDD-LKDTENLPPIMSLDEFMETLDSEPPFEDDSTQTVK 301
N S E+ D MQ L +DD LKD E LPPI+SLDEFME+LDSEPPFE
Sbjct: 411 NEKSRSTPPSTEEIDPMQGLGIDDELKDVEFLPPIVSLDEFMESLDSEPPFESPHG---- 466
Query: 302 DDPNSIEKTDISLKSEDSSKNVDSASASDSQLDPQTLSPQDKFESKLQ-----SPKKDAG 356
NS + S KS DS DS S S P+ LS + E+K + +P+ DA
Sbjct: 467 ---NSEMQVSPSEKS-DSEAGSDSKSPKGS---PKELSDKSLPEAKPEKIDEVTPEFDAN 519
Query: 357 SILFPVEQIKEDLLVKSSPEKANAENIDTGSQSIPESITDCKSAPDALLTHDSVWEGTIQ 416
++ +D+ S EKA A + D G ++ W+G +Q
Sbjct: 520 V------KVDDDI---SRVEKAAALSDDKGERA---------------------WDGILQ 549
Query: 417 LSLSSLTNVVAIFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSRSRAIMVTELR 476
LS+SS+ V IFKSGEK T+EW +++KGRVRLS F +F+++LPKSR+RA+MV L
Sbjct: 550 LSMSSVVPVAGIFKSGEKAETSEWPAMVEVKGRVRLSGFGKFIQELPKSRTRALMVMYLA 609
Query: 477 WKEGSLESGRQHLLRTIDSYIADERVGLVKPADGVELYLCPSQGKAAQILAEHLPKEQSS 536
+K+G ES R L+ IDSY+AD+RVG +PA GVELYLCP++G+ +L + + +EQ
Sbjct: 610 YKDGISESQRGSLIEVIDSYVADQRVGYAEPASGVELYLCPTRGETLDLLNKVISQEQLD 669
Query: 537 SLTVTGTSAIGVVVWRRPHVSPRIPARNDGSRNQSISRKQHAVIASAVPLSSK------- 589
+ +GVVVWRR V P GS+ Q S +P++ K
Sbjct: 670 EVKSLDIGLVGVVVWRRAVV----PKPGSGSKRQHSFSSSIGSKTSVLPVNKKQRVHVTE 725
Query: 590 -----PTNERQHHGQ----DVVTDDVPPGFGPGVVREDDDLPEYDF 626
+ HHG DDVPPGFGP R++DDLPE++F
Sbjct: 726 KPLVVASMRNHHHGYVKHDTAADDDVPPGFGPVASRDEDDLPEFNF 771
>AT5G25520.2 | chr5:8885550-8889484 FORWARD LENGTH=998
Length = 997
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 248/639 (38%), Positives = 350/639 (54%), Gaps = 105/639 (16%)
Query: 10 DELLQGHGLCWSSDVVGASETISQSDPDRVRKSDIDEGVDVSLIEHESKRIKTDDGAAEE 69
DELLQG+GL W + V +D G E
Sbjct: 330 DELLQGNGLSWVLEPV------------------------------------SDFGENET 353
Query: 70 KKSVTQKAQILAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITP 129
+KS + ++LA +IE ELF L GGVNKKYKEKGRSLLFNLKDK+NP LR V+SG I+P
Sbjct: 354 QKSF-EDPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISP 412
Query: 130 KRLCSMTTEELASKELSDWRLAKAEELAKMVVLPSKEVDVRRLVRKTHKGEFQVEVEETD 189
+RLC+MT EELASKELS WR AKAEE+A+MVVL ++DVR LVRKTHKGEFQVE++ D
Sbjct: 413 ERLCNMTAEELASKELSQWRQAKAEEMAEMVVLRDTDIDVRNLVRKTHKGEFQVEIDPVD 472
Query: 190 GISVEVGIGGDLLSHVPSRPTEGQTKTDDKSVHTEEKESDNSEQDGVIVTGGNNMPSNLE 249
+V+V ++ S+ S+P + + T +K N + + S +
Sbjct: 473 SGTVDV--SAEITSN--SKPRAKAKSSKSSTKATLKKNDSNDKN----IKSNQGTSSAVT 524
Query: 250 HTENEKTDLMQELMVDD-LKDTENLPPIMSLDEFMETLDSEPPFEDDSTQTV-KDDPNSI 307
E+ D MQ L +DD +KD LPPI+SLDEFME+L+SEPPF K+DP S
Sbjct: 525 LPPTEEIDPMQGLSMDDEMKDVGFLPPIVSLDEFMESLNSEPPFGSPHEHPPGKEDPAS- 583
Query: 308 EKTDISLKSEDSSKNVDSASASDSQLDPQTLSPQDKFESKLQSPKKDAGSILFPVEQIKE 367
EK+D S+D S + SP S QSPK+ + S+ E K
Sbjct: 584 EKSD----SKDGS---------------HSKSPS---RSPKQSPKEPSESVSSKTELEKT 621
Query: 368 DLLVKSSPEKANAENIDTGSQSIPESITDCKSAPDALLTHDSVWEGTIQLSLSSLTNVVA 427
+++ SP+ + +D G S PE+ + S + D +W+G +QLS +S+ +V
Sbjct: 622 NVI---SPKPDAGDQLD-GDVSKPENTSLVDS-----IKEDRIWDGILQLSSASVVSVTG 672
Query: 428 IFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSRSRAIMVTELRWKEGSLESGRQ 487
IFKSGEK T+EW +++KGRVRLSAF +F+++LP SRSR +MV + K G +S R
Sbjct: 673 IFKSGEKAKTSEWPTMVEVKGRVRLSAFGKFVKELPLSRSRVLMVMNVVCKNGISQSQRD 732
Query: 488 HLLRTIDSYIADERVGLVKPADGVELYLCPSQGKAAQILAEHLPKEQSSSLTVTGTSAIG 547
L+ SY+AD+RVG +P GVELYLCP+ G+ +L++ + K+ V + IG
Sbjct: 733 SLIEVAKSYVADQRVGYAEPTSGVELYLCPTLGETLDLLSKIISKDYLDE--VKCSEDIG 790
Query: 548 VVVWRRPHVSPRIPARNDGSRNQSISRKQHAVIASAVPLSSKPTNER------------- 594
++ V R + GSR++ ++QH+ + + + P N++
Sbjct: 791 LI---GVVVWRRAVVASPGSRHKPGFKRQHSSTGTKRSVLA-PENQKSRSVSVTNPSVVN 846
Query: 595 ----QHHGQDVVTD---DVPPGFGPGVVREDDDLPEYDF 626
++HG D D+PPGFGP ++DDDLPE++F
Sbjct: 847 VESMRNHGLVGCDDDDEDMPPGFGPVAAKDDDDLPEFNF 885
>AT2G25640.1 | chr2:10910836-10913908 FORWARD LENGTH=746
Length = 745
Score = 348 bits (894), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 228/554 (41%), Positives = 316/554 (57%), Gaps = 92/554 (16%)
Query: 9 QDELLQGHGLCWSSDVVGASETISQSDPDRVRKSDIDEGVDVSLIEHESKRIKTDDGAAE 68
+D+LLQG+ L W+ + SDI+ V+ ++E +DG+ E
Sbjct: 272 KDDLLQGNDLSWALE------------------SDIEFTVNC---QNEMIGAMANDGSLE 310
Query: 69 EKKSVTQKAQILAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDIT 128
+ + Q+LAFEIE ELF L GGVNKKYKEKGRSLLFNLKDKSNP LR +V+ G+I
Sbjct: 311 K---LLLDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIA 367
Query: 129 PKRLCSMTTEELASKELSDWRLAKAEELAKMVVLPSKEVDVRRLVRKTHKGEFQVEVEET 188
+RLCSM+ EELASKEL++WR AKAEE+A+MVVL EVD+R LVRKTHKGEFQVEVE
Sbjct: 368 AERLCSMSAEELASKELAEWRQAKAEEMAQMVVLQDTEVDIRSLVRKTHKGEFQVEVEPM 427
Query: 189 DGISVEVGIGGDLLSHVPSRPTEGQTKTDDKSVHTEEKESDNSEQDGVIVTGGNNMPSNL 248
D SVEV +G ++ ++ + +T + K++ + N
Sbjct: 428 DSGSVEVSVGMSSINWSRTKNFKKKTPSITKTLGVK----------------------NE 465
Query: 249 EHTENEKTDLMQELMVDD--LKDTENLPPIMSLDEFMETLDSEPPFEDDSTQTVK----D 302
++ NE T + + +DD T +LPPI+SLDEFM ++DSE P S+ T K
Sbjct: 466 LNSSNESTGPINGVTIDDEMQAATGSLPPIVSLDEFMSSIDSESPSGFLSSDTEKKPSVS 525
Query: 303 DPNSIEKTDISLKSEDSSKNVDSASASDSQLDPQTLSPQDKFESKLQSPKKDAGSILFPV 362
D N +E+ +S S S N+D + S + + LSP +K SP
Sbjct: 526 DNNDVEEVLVS--SPKESANIDLCT---SPVKAEALSP---LTAKASSP----------- 566
Query: 363 EQIKEDLLVKSSPEKANAENIDTGSQSIPESITDCKSAPDALLTHDS--VWEGTIQLSLS 420
NAE+ D S S P S D KS ++ D +WEG +QLS S
Sbjct: 567 ---------------VNAEDADIVS-SKPSS--DLKSKTTSVFIPDGERLWEGVLQLSPS 608
Query: 421 SLTNVVAIFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSRSRAIMVTELRWKEG 480
++++V+ I +SGEKT+T EW L+IKGRVRL AF++F+ +LP SRSRA+MV KE
Sbjct: 609 TVSSVIGILRSGEKTTTKEWPILLEIKGRVRLDAFEKFVRELPNSRSRAVMVMCFVCKEE 668
Query: 481 SLESGRQHLLRTIDSYIADERVGLVKPADGVELYLCPSQGKAAQILAEHLPKEQSSSL-T 539
++ ++++ +DSY D RVG +PA GVELYLCP++G+ +IL + +P+ Q L +
Sbjct: 669 CSKTEQENISEVVDSYAKDGRVGYAEPASGVELYLCPTRGRTVEILNKIVPRNQLDFLKS 728
Query: 540 VTGTSAIGVVVWRR 553
+ IGVVVWRR
Sbjct: 729 INDDGLIGVVVWRR 742
>AT3G29639.1 | chr3:11478732-11479733 REVERSE LENGTH=182
Length = 181
Score = 75.9 bits (185), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 415 IQLSLSSLTNVVAIFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSRSRAIMV 472
+QLS+SS+ V IFKSGEK T+EW +++K RVRLS F +F+++LPKSR+RA+MV
Sbjct: 5 LQLSMSSVVPVAGIFKSGEKAETSEWPAMVEVKRRVRLSGFGKFIQELPKSRTRALMV 62
>AT2G38560.1 | chr2:16134802-16136319 FORWARD LENGTH=379
Length = 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 44/63 (69%)
Query: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
+A +E +F LG K K RS++FNL+D +NP LR RVL+G+I+P++L +++ E+
Sbjct: 245 VAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAED 304
Query: 140 LAS 142
+AS
Sbjct: 305 MAS 307
>AT2G42730.1 | chr2:17787454-17791218 REVERSE LENGTH=738
Length = 737
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 79 ILAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTE 138
++A +E +F LG +K K RS+LFN+ D +NP LR +VL G+I +RL +M +
Sbjct: 641 VVAVSVESAMFEKLGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQ 700
Query: 139 ELASKEL 145
E+ S+++
Sbjct: 701 EMGSEKI 707
>AT4G18720.1 | chr4:10299945-10301228 FORWARD LENGTH=267
Length = 266
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 79 ILAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTE 138
++A +E +F LG K K RS+LFN+ D +NP LR +VL G+I+ +RL M E
Sbjct: 152 VVAVSVETAMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKE 211
Query: 139 ELASKELSDWR 149
E+ S ++ R
Sbjct: 212 EMGSSWYTNSR 222
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.309 0.129 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,325,833
Number of extensions: 645790
Number of successful extensions: 2282
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2282
Number of HSP's successfully gapped: 8
Length of query: 629
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 524
Effective length of database: 8,227,889
Effective search space: 4311413836
Effective search space used: 4311413836
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 115 (48.9 bits)