BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0594100 Os06g0594100|AK072650
(434 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13360.1 | chr4:7775133-7777701 FORWARD LENGTH=422 533 e-152
AT3G24360.1 | chr3:8839832-8842799 REVERSE LENGTH=419 511 e-145
AT5G65940.1 | chr5:26376830-26379161 REVERSE LENGTH=379 196 2e-50
AT2G30660.1 | chr2:13058500-13061665 REVERSE LENGTH=379 181 5e-46
AT2G30650.1 | chr2:13053777-13056315 REVERSE LENGTH=379 179 2e-45
AT4G31810.1 | chr4:15387365-15390290 REVERSE LENGTH=410 160 1e-39
AT1G06550.1 | chr1:2003834-2006564 REVERSE LENGTH=388 156 2e-38
AT3G60510.3 | chr3:22357141-22360003 REVERSE LENGTH=427 141 7e-34
AT4G16800.1 | chr4:9454931-9457000 REVERSE LENGTH=302 57 2e-08
>AT4G13360.1 | chr4:7775133-7777701 FORWARD LENGTH=422
Length = 421
Score = 533 bits (1374), Expect = e-152, Method: Compositional matrix adjust.
Identities = 248/382 (64%), Positives = 308/382 (80%)
Query: 50 RRFXXXXXXXXEEFVKGRVTPNGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVK 109
R+F ++FVKG V PNGVA+ITLDR KALNAMNL+MD++YK+FLDEWE++P VK
Sbjct: 36 RKFSAMAGAGVDDFVKGNVFPNGVALITLDRTKALNAMNLDMDIKYKSFLDEWESDPRVK 95
Query: 110 CVLVESSSPRAFSAGMDIKGVAAEIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMD 169
CV+VE S+ RAF AGMDIKGVAAEIQKDK+TPLVQKVFTAEY+LIC I Y KPYI LMD
Sbjct: 96 CVIVEGSTSRAFCAGMDIKGVAAEIQKDKNTPLVQKVFTAEYTLICAIAAYKKPYISLMD 155
Query: 170 GVTMGFGIGLSGHGRYRIITERTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMT 229
G+TMGFG+GLSGHGRYR+ITERT+LAMPENGIGLFPDVGF+YI A +PGGG+VG+YLG+T
Sbjct: 156 GITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVGFSYIAAHSPGGGSVGAYLGLT 215
Query: 230 GKRISSPADALFFGLGTHYVPSANLGPLRESLLSANFTDDPHRDVESLLTKFKNEPESGP 289
GKRIS+P+DALF GLGTHYVPS L L+E++LSAN ++DP++D+++ L+K+ + PES
Sbjct: 216 GKRISAPSDALFVGLGTHYVPSEKLASLKEAILSANLSEDPNQDIQATLSKYSSNPESEA 275
Query: 290 QLDKFLPYIISSFGPDKSVAESVEELKKCSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQ 349
L LP+I S+F +KS+ E++EELKK QS + GL+KGAPFSL LTQ
Sbjct: 276 HLKSLLPHIESAFSSNKSIKETIEELKKYQQSTESSVVEWANEALKGLEKGAPFSLYLTQ 335
Query: 350 KHFSQVASAYRNNEHYLSKLAGVMKVEYRIALRSSVRNDFVEGVRAVLVDKDQNPKWKPA 409
K+FS VA A E+ L+ L GVMK EYRIALRS++R DF EGVRAVL+DKDQNPKW P
Sbjct: 336 KYFSNVACAKSKPENELATLNGVMKTEYRIALRSALRGDFAEGVRAVLIDKDQNPKWNPT 395
Query: 410 TLEDVDKGEVESVFEPLAAEAE 431
++E+VD+ EVE++F+PL+ E E
Sbjct: 396 SIEEVDENEVEALFKPLSPEVE 417
>AT3G24360.1 | chr3:8839832-8842799 REVERSE LENGTH=419
Length = 418
Score = 511 bits (1316), Expect = e-145, Method: Compositional matrix adjust.
Identities = 246/386 (63%), Positives = 300/386 (77%), Gaps = 1/386 (0%)
Query: 50 RRFXXXXXXXXEEFVKGRVTPNGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVK 109
RR +EFVKG V PNGVA+ITLDRPKALNAMNLEMDL+YK+ LDEWE +P VK
Sbjct: 33 RRKFSVMASGSDEFVKGNVYPNGVALITLDRPKALNAMNLEMDLKYKSLLDEWEYDPGVK 92
Query: 110 CVLVESSSPRAFSAGMDIKGVAAEIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMD 169
CV+VE S+ RAF AGMDIKGV AEI DK+T LVQKVFTAEYSLICKI Y KPYI LMD
Sbjct: 93 CVVVEGSTSRAFCAGMDIKGVVAEILMDKNTSLVQKVFTAEYSLICKIAGYRKPYISLMD 152
Query: 170 GVTMGFGIGLSGHGRYRIITERTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMT 229
G+TMGFG+GLSGHGRYR+ITERT+LAMPENGIGLFPDVGF+YI A +PG G+VG+YLGMT
Sbjct: 153 GITMGFGLGLSGHGRYRVITERTVLAMPENGIGLFPDVGFSYIAAHSPGEGSVGAYLGMT 212
Query: 230 GKRISSPADALFFGLGTHYVPSANLGPLRESLLSANFTDDPHRDVESLLTKFKNEPESGP 289
G+RIS+P+DALF GLGTHYVPS LG LRE++LSA+ + DP + +++ L+ + ++PE+
Sbjct: 213 GRRISTPSDALFVGLGTHYVPSGKLGSLREAILSADLSKDPQQHIQATLSNYSSDPETES 272
Query: 290 QLDKFLPYIISSFGPDKSVAESVEELKKCSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQ 349
L LP I S+F KSV E++EELKK QS + G++KGAPFSL LT
Sbjct: 273 HLQMLLPQIESAFSVSKSVKETIEELKKFQQSSEASVAEWANEAVQGIEKGAPFSLYLTH 332
Query: 350 KHFSQVASAYRNNEHYLSKLAGVMKVEYRIALRSSVRNDFVEGVRAVLVDKDQNPKWKPA 409
K+FS+VA A + ++ L GVM EYRIALRS++R+DF EGVRAVL DKDQNPKWKPA
Sbjct: 333 KYFSKVACAKGKTNNAMATLNGVMITEYRIALRSALRSDFTEGVRAVLTDKDQNPKWKPA 392
Query: 410 TLEDVDKGEVESVFEPLAAE-AELNV 434
+L++VD+ EV+++F PL+ E ELNV
Sbjct: 393 SLDEVDETEVDALFMPLSPEFEELNV 418
>AT5G65940.1 | chr5:26376830-26379161 REVERSE LENGTH=379
Length = 378
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 193/368 (52%), Gaps = 24/368 (6%)
Query: 71 NGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMDIKGV 130
+ V ++TL+RPK LNA++ M R +E +PSVK V+++ RAF AG D+ V
Sbjct: 17 SSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAV 75
Query: 131 AAEIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYRIITE 190
+I + + L F++EY L + Y+K + +++G+ MG G G+S HGR+RI TE
Sbjct: 76 VRDINQG-NWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATE 134
Query: 191 RTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGTHYVP 250
T+ AMPE +GLFPDVG +Y ++ P G G Y+G+TG R+ A+ L GL TH+VP
Sbjct: 135 NTVFAMPETALGLFPDVGASYFLSRLP--GFFGEYVGLTGARLDG-AEMLACGLATHFVP 191
Query: 251 SANLGPLRESLLSANFTDDPHRDVESLLTKFKNEPESGPQLDKFLPYIISSFGPDKSVAE 310
S L L L N ++DP ++L + P Q +I ++V E
Sbjct: 192 STRLTALEADLCRIN-SNDPTF-ASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVEE 249
Query: 311 SVEEL-KKCSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQKHFSQVASAYRNNEHYLSKL 369
+ L ++ +Q D LKKG+P SL ++ + E L +
Sbjct: 250 IISALEREATQEAD----GWISATIQALKKGSPASLKISLRSI---------REGRLQGV 296
Query: 370 AGVMKVEYRI---ALRSSVRNDFVEGVRAVLVDKDQNPKWKPATLEDVDKGEVESVFEPL 426
+ EYR+ ++ + DFVEG RA+LVDKD+NPKW+P LED+ VE FE +
Sbjct: 297 GQCLIREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERV 356
Query: 427 AAEAELNV 434
E +L +
Sbjct: 357 EREDDLKL 364
>AT2G30660.1 | chr2:13058500-13061665 REVERSE LENGTH=379
Length = 378
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 181/358 (50%), Gaps = 26/358 (7%)
Query: 71 NGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMDIKGV 130
+ V ++TL+RPK LNA+ M R +E +PSVK V+++ RAF AG D+ V
Sbjct: 13 SSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQG-RAFCAGGDVPPV 71
Query: 131 AAEIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYRIITE 190
+ + K L F +Y+L + Y+KP + +++G+ MG G G+S HGR+RI TE
Sbjct: 72 VQNMVQGKWR-LGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGRFRIATE 130
Query: 191 RTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGTHYVP 250
T+ AMPE +GLFPDVG +Y ++ P G G Y+G+TG R+ A+ L GL TH+VP
Sbjct: 131 NTVFAMPETSLGLFPDVGASYFLSRLP--GFFGEYVGLTGARLDG-AELLACGLATHFVP 187
Query: 251 SANLGPLRESLLSANFTDDPHRDVESLLTKFKNEPESGPQLDKFLPYIISSFGPDKSVAE 310
S L L L +D V ++L + P + +I +++ E
Sbjct: 188 STRLTALETDLCKVGSSDPSF--VSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTMEE 245
Query: 311 SVEELKK--CSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQKHFSQVASAYRNNEHYLSK 368
+ L++ + DD LKK +P SL ++ + E L
Sbjct: 246 IISALERETTQELDD-----WSLTTIRALKKSSPSSLKISLRSI---------REGRLQG 291
Query: 369 LAGVMKVEYRI---ALRSSVRNDFVEGVRAVLVDKDQNPKWKPATLEDVDKGEVESVF 423
+ + EYR+ ++ + D VEG RA+L+DKD+NPKW+P LED+ V+ F
Sbjct: 292 VGHCLTREYRMVCHVMKGDLSKDLVEGCRAILIDKDRNPKWEPRRLEDMKDSMVDQFF 349
>AT2G30650.1 | chr2:13053777-13056315 REVERSE LENGTH=379
Length = 378
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 185/366 (50%), Gaps = 30/366 (8%)
Query: 71 NGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMDIKGV 130
+ V ++T +RPK LNA++ M R +E +PSVK V+++ RAFSAG DI +
Sbjct: 13 SSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQG-RAFSAGGDIPPI 71
Query: 131 AAEIQKDKSTPLVQ--KVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYRII 188
+I + K L++ F Y+L + Y KP + +++G+ MG G GLS +GR+RI
Sbjct: 72 VRDILQGK---LIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIA 128
Query: 189 TERTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGTHY 248
TE T+ AMPE +GLFPDVG +Y ++ P G G Y+G+TG R+ A+ L GL TH+
Sbjct: 129 TENTVFAMPETALGLFPDVGASYFLSRLP--GFFGEYVGLTGARLDG-AEMLACGLATHF 185
Query: 249 VPSANLGPLRESLLSANFTDDPHRDVESLLTKFKNEPESGPQLDKFLPYIISSFGPDKSV 308
VPS +L L L ++ + ++L + P +I ++V
Sbjct: 186 VPSISLTALEAELYKVGSSNQTF--ISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTV 243
Query: 309 AESVEELKK--CSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQKHFSQVASAYRNNEHYL 366
E L++ + +D L+K +P L ++ + E L
Sbjct: 244 EEIFSALEREVTQKPND-----WLLATIQALEKASPSCLKISLRSI---------REGRL 289
Query: 367 SKLAGVMKVEYRI---ALRSSVRNDFVEGVRAVLVDKDQNPKWKPATLEDVDKGEVESVF 423
+ + EYR+ ++ + DFVEG RAVL+DKD+NPKW+P LEDV V+ F
Sbjct: 290 QGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYF 349
Query: 424 EPLAAE 429
E + E
Sbjct: 350 ERVEDE 355
>AT4G31810.1 | chr4:15387365-15390290 REVERSE LENGTH=410
Length = 409
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 178/353 (50%), Gaps = 26/353 (7%)
Query: 78 LDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMDIKGVAAEIQKD 137
L+ P +LNA++ M R K + WE NP++ VL++ S + F +G D+ + I +
Sbjct: 56 LNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMKGSG-KTFCSGADVLSLYHSIN-E 113
Query: 138 KSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYRIITERTLLAMP 197
+T + F Y + Y KP I +MDGVTMG G G+S G +R+ T++T+LA P
Sbjct: 114 GNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHP 173
Query: 198 ENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGTHYVPSANLGPL 257
E IG PD G +Y ++ P G +G YL +TG++++ + + GL THY +A L PL
Sbjct: 174 EVQIGFHPDAGASYYLSRLP--GYLGEYLALTGQKLNG-VEMIACGLATHYCLNARL-PL 229
Query: 258 RESLLSANFTDDPHRDVESLLTKFKN--EPESGPQLDKFLPYIISSFGPDKSVAESVEEL 315
E + TDDP +E L ++ + P+S L K + I FG D +V E +E +
Sbjct: 230 IEERIGKLLTDDPAV-IEDSLAQYGDLVYPDSSSVLHK-IELIDKYFGLD-TVEEIIEAM 286
Query: 316 KKCSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQKHFSQVASAYRNNEHYLSKLAGVMKV 375
+ + + +K+ +P SL +T + E L +
Sbjct: 287 ENEAAN---SCNEWCKKTLKQIKEASPLSLKITLQSI---------REGRFQTLDQCLTH 334
Query: 376 EYRIAL---RSSVRNDFVEGVRAVLVDKDQNPKWKPATLEDVDKGEVESVFEP 425
EYRI++ V DF EG+RA LVDKD PKW P LEDV K V+ F P
Sbjct: 335 EYRISICGVSKVVSGDFCEGIRARLVDKDFAPKWDPPRLEDVSKDMVDCYFTP 387
>AT1G06550.1 | chr1:2003834-2006564 REVERSE LENGTH=388
Length = 387
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 187/357 (52%), Gaps = 28/357 (7%)
Query: 73 VAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMDIKGVAA 132
V + TL+RP+ LN ++ E+ + +L+ WE + K +L++ + RAFSAG D+K V
Sbjct: 21 VRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTG-RAFSAGGDLK-VFY 78
Query: 133 EIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYRIITERT 192
Q+ K + L +V Y L IH Y K + L++G++MG G L ++ ++TE+T
Sbjct: 79 HGQESKDSCL--EVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFSVVTEKT 136
Query: 193 LLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGTHYVPSA 252
+ A PE G D GF+YI ++ P G +G +L +TG R++ + + G+ TH+VPS
Sbjct: 137 VFATPEASFGFHTDCGFSYIHSRLP--GHLGEFLALTGARLNGK-ELVAIGMATHFVPSG 193
Query: 253 NLGPLRESLLSANFTDDPHRDVESLLTKF--KNEPESGPQLDKFLPYIISSFGPDKSVAE 310
L L L+S + D V+S + +F K + L+K +I+ +SV +
Sbjct: 194 KLMDLEARLVSLDSGDADV--VQSTIEEFSEKVNLDKDSILNK--QSVINECFSKESVKQ 249
Query: 311 SVEELKKCSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQKHFSQVASAYRNNEHYLSKLA 370
++ + + D GLK+ +P L + V + R E L+
Sbjct: 250 IIQAFEAEASKD---GNEWITPVIKGLKRSSPTGLKI-------VLQSIR--EGRKQTLS 297
Query: 371 GVMKVEYRIA---LRSSVRNDFVEGVRAVLVDKDQNPKWKPATLEDVDKGEVESVFE 424
+K E+R+ LR ++ D EG+RA+ +DKD +PKW PATL++VD ++ SVF+
Sbjct: 298 DCLKKEFRLTLNILRKTISPDMYEGIRALTIDKDNSPKWNPATLDEVDDEKINSVFK 354
>AT3G60510.3 | chr3:22357141-22360003 REVERSE LENGTH=427
Length = 426
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 186/383 (48%), Gaps = 42/383 (10%)
Query: 78 LDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGMDIKGVAAEIQKD 137
L+RP ALNA+ M R + WE +P++ V+++ S RAF AG DI + ++
Sbjct: 52 LNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG-RAFCAGGDIVSL-YHLRTR 109
Query: 138 KSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIGLSGHGRYRIITERTLLAMP 197
S +++ F++ YS I + Y KP++ +++GVTMG G G+S G +R+ T+RT+ A P
Sbjct: 110 GSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATP 169
Query: 198 ENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISSPADALFFGLGTHYVPSANLGPL 257
E IG PD G ++ + P G +G YLG+TG ++S A+ L GL THY+ S + P+
Sbjct: 170 ETIIGFHPDAGASFNLSHLP--GRLGEYLGLTGLKLSG-AEMLACGLATHYIRSEEV-PV 225
Query: 258 RESLLSANFTDDPHRDVESLLTKFKN--EPE---------------SGPQLDKFLPYIIS 300
E L TDDP VES L K PE S +++ + ++S
Sbjct: 226 MEEQLKKLLTDDPSV-VESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTVEEIIDSLVS 284
Query: 301 SFGPDK-----SVAESVEELKKCSQSDDXXXXXXXXXXXXGLKKGAPFSLCLTQKHFSQV 355
F D SV S L LK+ +P SL + +
Sbjct: 285 FFTNDSASMTISVTRSNSVLGHQEIEASRRKDTWCITTLRRLKESSPLSLKVALRSI--- 341
Query: 356 ASAYRNNEHYLSKLAGVMKVEYRIALRSSV---RNDFVEGVRAVLVDKDQNPKWKPATLE 412
E L L + EYR++L+ + +F EGVRA L+DKD+ PKW P +LE
Sbjct: 342 ------REGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLE 395
Query: 413 DVDKGEVESVFEPLA-AEAELNV 434
V + V+ F L E +L++
Sbjct: 396 KVSEDMVDDYFCALTPTEPDLDL 418
>AT4G16800.1 | chr4:9454931-9457000 REVERSE LENGTH=302
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 9/177 (5%)
Query: 62 EFVK-GRVT--PNGVAVITLDRPKALNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSP 118
EFVK R++ +G+ + LDRP NA+N EM + + + S + V++ S P
Sbjct: 41 EFVKLNRLSGSDSGIIEVNLDRPVTKNAINKEMLKSLQNAFESIHQDNSARVVMIRSLVP 100
Query: 119 RAFSAGMDIKGVAAEIQKDKSTPLVQKVFTAEYSLICKIHEYTKPYICLMDGVTMGFGIG 178
F AG D+K ++ S V + + I + P I ++G +G G+
Sbjct: 101 GVFCAGADLKE-----RRTMSPSEVHTYVNSLRYMFSFIEALSIPTIAAIEGAALGGGLE 155
Query: 179 LSGHGRYRIITERTLLAMPENGIGLFPDVGFAYIGAKAPGGGAVGSYLGMTGKRISS 235
++ RI E + +PE G+ + P G ++ G +V L TG++I +
Sbjct: 156 MALACDLRICGENAVFGLPETGLAIIPGAGGTQRLSRLV-GRSVSKELIFTGRKIDA 211
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,835,356
Number of extensions: 356354
Number of successful extensions: 772
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 755
Number of HSP's successfully gapped: 14
Length of query: 434
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 333
Effective length of database: 8,337,553
Effective search space: 2776405149
Effective search space used: 2776405149
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)