BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0548000 Os06g0548000|AK101008
(463 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30970.1 | chr2:13179012-13181686 FORWARD LENGTH=431 736 0.0
AT5G19550.1 | chr5:6598201-6601597 FORWARD LENGTH=406 415 e-116
AT5G11520.1 | chr5:3685257-3687721 REVERSE LENGTH=450 413 e-115
AT1G62800.2 | chr1:23253934-23257416 REVERSE LENGTH=406 395 e-110
AT4G31990.3 | chr4:15470876-15473521 REVERSE LENGTH=463 389 e-108
>AT2G30970.1 | chr2:13179012-13181686 FORWARD LENGTH=431
Length = 430
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/403 (83%), Positives = 372/403 (92%)
Query: 60 RSMASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAERR 119
RSM+SW+ VEPA KDPILGVTEAFLADPSP+KVNVGVGAYRDD+GKPVVLECVREAE+R
Sbjct: 27 RSMSSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAEKR 86
Query: 120 IAGSMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADFQKR 179
+AGS MEYLPMGGS KM++ +LKLAYG+N EFIKDKRIAAVQ LSGTGACRLFADFQKR
Sbjct: 87 LAGSTFMEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADFQKR 146
Query: 180 FLPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFFL 239
F P SQIYIP PTW+NHHNIW+DAQVPQKT+ YYHPE++GLDF+ LMDD+KNAP+GSFFL
Sbjct: 147 FSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPETKGLDFSALMDDVKNAPEGSFFL 206
Query: 240 LHACAHNPTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASGDPERDAKAIRIFLEDG 299
LHACAHNPTGVDP+EEQWREIS FK KKHF FFDMAYQGFASGDP RDAK+IRIFLEDG
Sbjct: 207 LHACAHNPTGVDPTEEQWREISQLFKAKKHFAFFDMAYQGFASGDPARDAKSIRIFLEDG 266
Query: 300 HQIGCAQSYAKNMGLYGQRAGCLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHGALIVS 359
H IG +QSYAKNMGLYGQR GCLS+LC+D QAVAVKSQLQQ+ARP+YSNPP+HGA +VS
Sbjct: 267 HHIGISQSYAKNMGLYGQRVGCLSVLCEDPKQAVAVKSQLQQLARPMYSNPPLHGAQLVS 326
Query: 360 TILGDPELKSLWLKEVKGMADRIIGMRTALKENLEKLGSPMSWEHITNQIGMFCYSGMTP 419
TIL DPELKSLWLKEVK MADRIIGMRT L+E+LEKLGSP+SWEH+T QIGMFCYSG+TP
Sbjct: 327 TILEDPELKSLWLKEVKVMADRIIGMRTTLRESLEKLGSPLSWEHVTKQIGMFCYSGLTP 386
Query: 420 EQVDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAIHEVTKT 462
EQVDRLT E+HIYMTRNGRISMAGVTTGNV YLANAIHEVTK+
Sbjct: 387 EQVDRLTSEYHIYMTRNGRISMAGVTTGNVGYLANAIHEVTKS 429
>AT5G19550.1 | chr5:6598201-6601597 FORWARD LENGTH=406
Length = 405
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/398 (50%), Positives = 270/398 (67%), Gaps = 2/398 (0%)
Query: 62 MASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAERRIA 121
M S F +V A +DPILGVT A+ DPSP K+N+GVGAYR + GKP+VL+ VR+AE+++
Sbjct: 1 MDSVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLV 60
Query: 122 G--SMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADFQKR 179
S EY+P+ G + S KL G + I + R+ VQ LSGTG+ R+ A+F K
Sbjct: 61 NDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKT 120
Query: 180 FLPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFFL 239
S IYIP PTW NH ++ A + + F YY P +RGLDF GL++D+ AP G+ L
Sbjct: 121 HYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVL 180
Query: 240 LHACAHNPTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASGDPERDAKAIRIFLEDG 299
LHACAHNPTGVDP+ EQW +I + K PFFD AYQGFASG + DA+++R F+ DG
Sbjct: 181 LHACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADG 240
Query: 300 HQIGCAQSYAKNMGLYGQRAGCLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHGALIVS 359
+ AQSYAKNMGLYG+R G LSI+C A V+SQ++ + RP+YS+PP+HGA IV+
Sbjct: 241 GECLIAQSYAKNMGLYGERVGALSIVCKSADVASKVESQVKLVVRPMYSSPPIHGASIVA 300
Query: 360 TILGDPELKSLWLKEVKGMADRIIGMRTALKENLEKLGSPMSWEHITNQIGMFCYSGMTP 419
TIL ++ + W E+K MADRI MR L E ++ G+P W HI QIGMF ++G+
Sbjct: 301 TILKSSDMYNNWTIELKEMADRIKSMRQQLFEAIQARGTPGDWSHIIKQIGMFTFTGLNK 360
Query: 420 EQVDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAIH 457
EQV+ +TKEFHIYMT +GRISMAG+++ V +LA+A+H
Sbjct: 361 EQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMH 398
>AT5G11520.1 | chr5:3685257-3687721 REVERSE LENGTH=450
Length = 449
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 266/400 (66%), Gaps = 2/400 (0%)
Query: 63 ASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAERRIAG 122
S F H+ A +DPILGVT A+ DPSP K+N+GVGAYR + GKP+VL VR+AE+++
Sbjct: 46 GSVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLIN 105
Query: 123 SMN--MEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADFQKRF 180
EYLP+ G ++ + S KL G + I++ RI V+ LSGTG+ R+ +F +
Sbjct: 106 DRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKH 165
Query: 181 LPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFFLL 240
IYI PTW NH I+ A + KT+ YY P +RGL+F GL++D+ A GS LL
Sbjct: 166 YHQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLL 225
Query: 241 HACAHNPTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASGDPERDAKAIRIFLEDGH 300
HACAHNPTGVDP+ +QW +I + K PFFD AYQGFASG + DAK IR+F+ DG
Sbjct: 226 HACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGG 285
Query: 301 QIGCAQSYAKNMGLYGQRAGCLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHGALIVST 360
+ AQSYAKNMGLYG+R G LSI+C A V+SQL+ + RP+YS+PP+HGA IV+
Sbjct: 286 ECLVAQSYAKNMGLYGERVGALSIVCKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAV 345
Query: 361 ILGDPELKSLWLKEVKGMADRIIGMRTALKENLEKLGSPMSWEHITNQIGMFCYSGMTPE 420
IL D L + W E+K MADRII MR L E L G+P W HI QIGMF ++G+ P
Sbjct: 346 ILRDKNLFNEWTLELKAMADRIISMRKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPA 405
Query: 421 QVDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAIHEVT 460
QV +TKE+HIYMT +GRISMAG+++ V +LA+AIH V
Sbjct: 406 QVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAVV 445
>AT1G62800.2 | chr1:23253934-23257416 REVERSE LENGTH=406
Length = 405
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 264/401 (65%), Gaps = 2/401 (0%)
Query: 62 MASWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAERRIA 121
M S V PA +DP+L V A DPSP K+N+ G YR + GKP+VL+ VR AE+++A
Sbjct: 1 MNSILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLA 60
Query: 122 G--SMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADFQKR 179
S + EYLP+ G + + S KL G++ +K+ R+ Q LSGTG+ R+ A+F
Sbjct: 61 NDLSRDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLAT 120
Query: 180 FLPDSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFFL 239
+S I++P PTW NH I+ A + + F YY P+SRGLDF G+++D+ AP G+ +
Sbjct: 121 HNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVV 180
Query: 240 LHACAHNPTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASGDPERDAKAIRIFLEDG 299
L ACAHNPTGVDP+ EQW +I + K PFFD AYQGFASG + DA+A+R+F+ DG
Sbjct: 181 LQACAHNPTGVDPTFEQWEKIRRLVRSKSLLPFFDSAYQGFASGSLDADAQAVRMFVADG 240
Query: 300 HQIGCAQSYAKNMGLYGQRAGCLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHGALIVS 359
+ AQSYAKNMGLYG+R G L+I+C E A V++Q+ + RP+Y PP+HGA IV+
Sbjct: 241 GECLIAQSYAKNMGLYGERIGSLTIVCTSEDVAKKVENQVLLVVRPMYLTPPIHGASIVA 300
Query: 360 TILGDPELKSLWLKEVKGMADRIIGMRTALKENLEKLGSPMSWEHITNQIGMFCYSGMTP 419
TIL + ++ + W E+KGMADRII MR L LE G+P W HI IGMF ++G++
Sbjct: 301 TILKNSDMYNDWTIELKGMADRIISMRQQLYAALEARGTPGDWSHIIKHIGMFTFTGLSE 360
Query: 420 EQVDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAIHEVT 460
EQV + KE+HIYMT +GRISMA +++ V LA+AIH V
Sbjct: 361 EQVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVV 401
>AT4G31990.3 | chr4:15470876-15473521 REVERSE LENGTH=463
Length = 462
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/395 (47%), Positives = 265/395 (67%), Gaps = 2/395 (0%)
Query: 64 SWFGHVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDSGKPVVLECVREAER-RIAG 122
S F + A DPILGV+EAF AD + K+N+GVGAYR + +P VL V++AE +
Sbjct: 51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLER 110
Query: 123 SMNMEYLPMGGSIKMIEESLKLAYGENCEFIKDKRIAAVQALSGTGACRLFADFQKRFLP 182
N EYLP+ G + + +L +G IK++R+A +Q LSGTG+ RL A +R+ P
Sbjct: 111 GDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFP 170
Query: 183 DSQIYIPTPTWANHHNIWRDAQVPQKTFTYYHPESRGLDFAGLMDDIKNAPDGSFFLLHA 242
+++ I +PTW NH NI+ DA+VP + YY P++ GLDF G++ DIK AP+GSF LLH
Sbjct: 171 GAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHG 230
Query: 243 CAHNPTGVDPSEEQWREISHQFKVKKHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQI 302
CAHNPTG+DP+ EQW +I+ + K H PFFD+AYQGFASG + DA ++R+F E G +
Sbjct: 231 CAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEF 290
Query: 303 GCAQSYAKNMGLYGQRAGCLSILCDDEMQAVAVKSQLQQIARPLYSNPPVHGALIVSTIL 362
AQSY+KN+GLY +R G ++++C A VKSQL++IARP+YSNPPVHGA IV+ ++
Sbjct: 291 FVAQSYSKNLGLYAERIGAINVVCSSADAATRVKSQLKRIARPMYSNPPVHGARIVANVV 350
Query: 363 GDPELKSLWLKEVKGMADRIIGMRTALKENL-EKLGSPMSWEHITNQIGMFCYSGMTPEQ 421
GD + S W E++ MA RI +R L ++L K S W I QIGMF ++G+ Q
Sbjct: 351 GDVTMFSEWKAEMEMMAGRIKTVRQELYDSLVSKDKSGKDWSFILKQIGMFSFTGLNKAQ 410
Query: 422 VDRLTKEFHIYMTRNGRISMAGVTTGNVAYLANAI 456
D +T ++H+YMT++GRIS+AG++ YLA+AI
Sbjct: 411 SDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAI 445
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,623,550
Number of extensions: 412899
Number of successful extensions: 853
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 848
Number of HSP's successfully gapped: 5
Length of query: 463
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 361
Effective length of database: 8,310,137
Effective search space: 2999959457
Effective search space used: 2999959457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)