BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0526100 Os06g0526100|Os06g0526100
(396 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53210.1 | chr5:21586606-21588941 REVERSE LENGTH=365 129 3e-30
AT3G06120.1 | chr3:1846531-1848016 FORWARD LENGTH=203 107 8e-24
AT3G24140.1 | chr3:8715525-8717772 REVERSE LENGTH=415 100 2e-21
AT1G22490.1 | chr1:7938448-7940489 REVERSE LENGTH=305 97 2e-20
AT4G01460.1 | chr4:621334-622697 FORWARD LENGTH=316 96 3e-20
AT1G72210.1 | chr1:27180066-27182268 FORWARD LENGTH=321 94 2e-19
AT5G46690.1 | chr5:18945639-18947434 FORWARD LENGTH=328 91 8e-19
AT2G46810.1 | chr2:19239694-19242373 FORWARD LENGTH=372 87 2e-17
AT3G61950.1 | chr3:22939661-22941332 FORWARD LENGTH=359 86 3e-17
AT5G65320.1 | chr5:26107368-26108640 REVERSE LENGTH=297 77 1e-14
AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567 54 1e-07
AT5G57150.4 | chr5:23152361-23154801 FORWARD LENGTH=265 54 2e-07
AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591 54 2e-07
AT4G29930.3 | chr4:14644108-14645505 FORWARD LENGTH=264 53 2e-07
AT4G09820.1 | chr4:6182067-6186261 FORWARD LENGTH=519 52 4e-07
AT1G12860.1 | chr1:4384758-4386392 FORWARD LENGTH=451 52 5e-07
AT3G26744.1 | chr3:9832953-9834790 REVERSE LENGTH=495 51 8e-07
AT4G00870.1 | chr4:362230-363639 REVERSE LENGTH=424 51 1e-06
AT2G16910.1 | chr2:7331721-7334077 FORWARD LENGTH=572 49 5e-06
>AT5G53210.1 | chr5:21586606-21588941 REVERSE LENGTH=365
Length = 364
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 75/129 (58%), Gaps = 24/129 (18%)
Query: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
K +H+ VERNRRKQMNE+L VLRSLMPCFYVKRGDQASIIGGVV+YI ELQQVL SLEAK
Sbjct: 101 KMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAK 160
Query: 196 KQRKVYTDQVLSPRPPATVAASCCXXXXXXXXXXXXXXXXKSTPPLSPRLAV-------- 247
KQRK Y A PPLSPR+
Sbjct: 161 KQRKTY--------------AEVLSPRVVPSPRPSPPVLSPRKPPLSPRINHHQIHHHLL 206
Query: 248 --PISPRTP 254
PISPRTP
Sbjct: 207 LPPISPRTP 215
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/79 (68%), Positives = 67/79 (84%)
Query: 317 LPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKI 376
L DV+V+F+GAN++LKTVS + PGQ +KIIAALE +LEIL I+TVD+T +NSFT+KI
Sbjct: 285 LADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKI 344
Query: 377 GIECELSAEELVQVIQQTF 395
GIEC+LSAEEL Q IQQTF
Sbjct: 345 GIECQLSAEELAQQIQQTF 363
>AT3G06120.1 | chr3:1846531-1848016 FORWARD LENGTH=203
Length = 202
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 7/78 (8%)
Query: 138 AHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQ 197
+HIAVERNRR+QMNE+L LRSL PCFY+KRGDQASIIGGV+++IKELQQ++ LE+KK+
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKR 61
Query: 198 RKV-------YTDQVLSP 208
RK Y Q + P
Sbjct: 62 RKTLNRPSFPYDHQTIEP 79
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%)
Query: 319 DVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVNSFTVKIGI 378
+V+ + +G+N+VL+ VS+R GQ VKII+ LE S ++LH IS++++T + F VKIG+
Sbjct: 116 NVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGL 175
Query: 379 ECELSAEELVQVIQQTF 395
EC LS EEL +Q++F
Sbjct: 176 ECHLSLEELTLEVQKSF 192
>AT3G24140.1 | chr3:8715525-8717772 REVERSE LENGTH=415
Length = 414
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Query: 115 KRRKCCSPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASI 174
KR++ + ++S + + HIAVERNRRKQMNE+L VLRSLMP YV+RGDQASI
Sbjct: 179 KRKRARTSKTS----EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASI 234
Query: 175 IGGVVDYIKELQQVLHSLEAKKQRKV 200
IGG +++++EL+Q+L LE++K+R++
Sbjct: 235 IGGAIEFVRELEQLLQCLESQKRRRI 260
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Query: 312 GGGLL---------LPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKIS 362
GGGL L DV+V+ G + ++K +S+R PGQ +K IAALE L ILH I+
Sbjct: 301 GGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNIT 360
Query: 363 TVDDTAVNSFTVKIGIECELSAEELVQVIQQTFT 396
T++ T + SF VKI E +AE++ IQQ F+
Sbjct: 361 TMEQTVLYSFNVKITSETRFTAEDIASSIQQIFS 394
>AT1G22490.1 | chr1:7938448-7940489 REVERSE LENGTH=305
Length = 304
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
+ HIAVERNRRKQMNE LAVLRSLMP Y +RGDQASI+GG ++Y+KEL+ +L S+E K
Sbjct: 114 RMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPK 173
Query: 196 KQR 198
+ R
Sbjct: 174 RTR 176
>AT4G01460.1 | chr4:621334-622697 FORWARD LENGTH=316
Length = 315
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Query: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
+ HIAVERNRR+QMNE+L LRSLMP +++RGDQASI+GG +D+IKEL+Q+L SLEA+
Sbjct: 114 RMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAE 173
Query: 196 KQRKVYTDQ 204
K RK TD+
Sbjct: 174 K-RKDGTDE 181
>AT1G72210.1 | chr1:27180066-27182268 FORWARD LENGTH=321
Length = 320
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLE 193
+ HIAVERNRRKQMNE LAVLRSLMP +Y +RGDQASI+GG ++Y+KEL+ L S+E
Sbjct: 124 RMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSME 181
>AT5G46690.1 | chr5:18945639-18947434 FORWARD LENGTH=328
Length = 327
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 132 ATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHS 191
A + HIAVERNRR+QMN++L+VLRSLMP + +GDQASI+GG +D+IKEL+ L S
Sbjct: 83 AENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLS 142
Query: 192 LEAKKQRKVYTDQ 204
LEA+K +Q
Sbjct: 143 LEAQKHHNAKLNQ 155
>AT2G46810.1 | chr2:19239694-19242373 FORWARD LENGTH=372
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 56/76 (73%)
Query: 128 DVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQ 187
++ + + HIAVERNRR+QMN +L LRS++P Y++RGDQASI+GG +D++K L+Q
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243
Query: 188 VLHSLEAKKQRKVYTD 203
L SLEA+K+ + D
Sbjct: 244 QLQSLEAQKRSQQSDD 259
>AT3G61950.1 | chr3:22939661-22941332 FORWARD LENGTH=359
Length = 358
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 53/62 (85%)
Query: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
+ HIAVERNRR+QMNE++ LR+L+P Y++RGDQASI+GG ++Y+K L+Q++ SLE++
Sbjct: 177 RINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQ 236
Query: 196 KQ 197
K+
Sbjct: 237 KR 238
>AT5G65320.1 | chr5:26107368-26108640 REVERSE LENGTH=297
Length = 296
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 112 SPQKRRKCC-------SPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCF 164
SP + R C S + + HIAVERNRRKQMN L++L+S+MP
Sbjct: 70 SPLRERYGCGDFLSRKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLS 129
Query: 165 YVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
Y + DQASII G + Y+K+L+Q L SLEA+
Sbjct: 130 YSQPNDQASIIEGTISYLKKLEQRLQSLEAQ 160
>AT2G46510.1 | chr2:19091187-19092887 REVERSE LENGTH=567
Length = 566
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
H+ ER RR+++N+ LRS++P + + D+AS++G + YIKELQ+ + +E
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAISYIKELQEKVKIME---DE 450
Query: 199 KVYTDQVLSPRPPATVAAS 217
+V TD+ LS TV S
Sbjct: 451 RVGTDKSLSESNTITVEES 469
>AT5G57150.4 | chr5:23152361-23154801 FORWARD LENGTH=265
Length = 264
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 121 SPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVD 180
S +SS+ D AA++P + +I ERNRR+++N+ L LRS++P + + D+ASII +
Sbjct: 39 SYDSSSPD-GAASSPASKNIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAIS 95
Query: 181 YIKELQQVLHSLEAK 195
YI+ LQ LEA+
Sbjct: 96 YIEGLQYEEKKLEAE 110
>AT1G01260.1 | chr1:109595-111367 FORWARD LENGTH=591
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
H+ ER RR+++N+ LRS++P + + D+AS++G V YI EL L +EA+++R
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAERER 491
Query: 199 KVYTDQVLSPRPPATV 214
Y S PP ++
Sbjct: 492 LGY-----SSNPPISL 502
>AT4G29930.3 | chr4:14644108-14645505 FORWARD LENGTH=264
Length = 263
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 121 SPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVD 180
S ESS+ D AA + + ++ ERNRR+++N+ L LRS++P + + D+AS+I +D
Sbjct: 37 SGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSID 94
Query: 181 YIKELQQVLHSLEAK 195
Y++EL +LEA+
Sbjct: 95 YMQELIDQEKTLEAE 109
>AT4G09820.1 | chr4:6182067-6186261 FORWARD LENGTH=519
Length = 518
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 138 AHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLE 193
+H+ ER RR+++NE LRS++P +V + D+ SI+G + Y+ L++ +H LE
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>AT1G12860.1 | chr1:4384758-4386392 FORWARD LENGTH=451
Length = 450
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+KEL Q ++ L + +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 199 KVYTDQVLSPRPP 211
+ L P P
Sbjct: 326 TPPSSSSLHPLTP 338
>AT3G26744.1 | chr3:9832953-9834790 REVERSE LENGTH=495
Length = 494
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSL 192
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+KEL Q ++ L
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDL 359
>AT4G00870.1 | chr4:362230-363639 REVERSE LENGTH=424
Length = 423
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 13/101 (12%)
Query: 112 SPQKRRKCCSPESSTTDVAAATTPK-----TAHIAVERNRRKQMNENLAVLRSLMPCFYV 166
S +KRR+ TT VAAAT K +H+ E+ RR+++N LR+++P V
Sbjct: 222 SERKRRRKLE----TTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPK--V 275
Query: 167 KRGDQASIIGGVVDYIKELQQVLHSLEA--KKQRKVYTDQV 205
R D+AS++ V YI+ L+ + LE KK + TD++
Sbjct: 276 SRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKL 316
>AT2G16910.1 | chr2:7331721-7334077 FORWARD LENGTH=572
Length = 571
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 136 KTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAK 195
+ ++ ER RRK++N+ L LRSL+P + + D+ASI+G ++Y+KELQ L+ +
Sbjct: 312 QAKNLMAERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQDE 369
Query: 196 KQRKVYTDQVLSPRPPATVA 215
+ T+ S RP ++
Sbjct: 370 LEENSETEDG-SNRPQGGMS 388
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.129 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,950,209
Number of extensions: 232983
Number of successful extensions: 853
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 885
Number of HSP's successfully gapped: 24
Length of query: 396
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 295
Effective length of database: 8,337,553
Effective search space: 2459578135
Effective search space used: 2459578135
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 113 (48.1 bits)