BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0355500 Os06g0355500|AK065914
(378 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583 195 3e-50
AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062 75 5e-14
AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387 69 3e-12
AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591 69 6e-12
AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387 66 2e-11
AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621 66 3e-11
AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690 66 4e-11
AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679 65 6e-11
AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495 64 2e-10
AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462 63 2e-10
AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488 60 2e-09
AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767 59 5e-09
AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814 57 2e-08
AT3G54610.1 | chr3:20213593-20217375 FORWARD LENGTH=569 57 2e-08
AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653 54 1e-07
AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917 53 2e-07
AT1G76380.2 | chr1:28651416-28654536 REVERSE LENGTH=581 53 2e-07
>AT1G58025.2 | chr1:21457755-21461757 REVERSE LENGTH=583
Length = 582
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 137/208 (65%), Gaps = 26/208 (12%)
Query: 166 VARKVASIKIKSV----GLSSVEDKNQDRKADSVSEPLPSKQETVLENVESETALELRSS 221
V RK I+IKS G SSV +K+ D+V Q+ V+ +++T+ E +
Sbjct: 135 VYRKTKGIRIKSSKAVDGSSSVTEKSA---TDTVK-----VQDVVVGQKDTKTSEENSQA 186
Query: 222 QELEVKQATPERQRDDR-----------ELTAALEAIKKVMKMDAAEPFNTPVDPVALGI 270
+ E + AT Q++++ EL +L IKK+MKM+AA+PFN PV+P ALGI
Sbjct: 187 SKKEAEIATISLQKEEKKTDQNLRYNKQELEDSLIVIKKIMKMEAADPFNVPVNPEALGI 246
Query: 271 PDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRV 330
PDYFDII TPMDFGTIC N E+G+KYMNSEDVYKDV +IW+NC+KYN KGDYI++LMKRV
Sbjct: 247 PDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRV 306
Query: 331 KKGFMKNWLAAGLYSDVQENGGNDNTGD 358
KK FMK W +AGLY+ E +NT D
Sbjct: 307 KKNFMKYWTSAGLYT---EQSAAENTED 331
>AT5G63320.1 | chr5:25374413-25378783 REVERSE LENGTH=1062
Length = 1061
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 258 PFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDVQFIWDNCTKYN 317
PF TPVDPV L IPDYF++I PMD GTI L +G+ Y + D DV+ + N YN
Sbjct: 180 PFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE-YSSPLDFAADVRLTFSNSIAYN 238
Query: 318 SKGDYIIELMKRVKKGFMKNW 338
G+ + + + K F W
Sbjct: 239 PPGNQFHTMAQGISKYFESGW 259
>AT2G34900.1 | chr2:14723333-14725562 REVERSE LENGTH=387
Length = 386
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
+++ + A PF PVD LG+ DY+ +I+ PMD GTI + +E + Y N ++Y DV
Sbjct: 118 FRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE-YSNVREIYADV 176
Query: 307 QFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 339
+ ++ N +YN + + + + + + + F + WL
Sbjct: 177 RLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWL 209
>AT5G65630.1 | chr5:26226311-26228257 REVERSE LENGTH=591
Length = 590
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 240 LTAALEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNS 299
L + + K+MK A FNTPVD V LG+ DY ++ PMD GT+ NL++G Y++
Sbjct: 170 LNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKG-FYVSP 228
Query: 300 EDVYKDVQFIWDNCTKYNSKG 320
D DV+ +DN YN KG
Sbjct: 229 IDFATDVRLTFDNAMTYNPKG 249
>AT3G52280.2 | chr3:19389103-19391289 REVERSE LENGTH=387
Length = 386
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLER--GDKYMNSEDVYK 304
+++ + A PF PV+ LG+ DYF++ID PMDF TI +E G Y + +Y
Sbjct: 119 FRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYA 178
Query: 305 DVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNW 338
D++ +++N YN + + + K++ + F + W
Sbjct: 179 DMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKW 212
>AT3G01770.1 | chr3:275582-278386 REVERSE LENGTH=621
Length = 620
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
+K++M FNTPVD V L IPDYF II PMD GT+ L G Y + + DV
Sbjct: 137 LKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSG-TYSSPSEFSADV 195
Query: 307 QFIWDNCTKYNSKGDYIIELMKRVKKGFMKNW 338
+ + N YN + + + K F W
Sbjct: 196 RLTFRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
>AT5G14270.2 | chr5:4605173-4608517 FORWARD LENGTH=690
Length = 689
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
+K++M FNTPVD V L I DYF++I+ PMD GT+ L G Y + DV
Sbjct: 145 LKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSG-TYSCPSEFAADV 203
Query: 307 QFIWDNCTKYNSKGDYIIELMKRVKKGFMKNW 338
+ + N YN G+ + + ++K F W
Sbjct: 204 RLTFSNAMTYNPPGNDVYVMADTLRKFFEVRW 235
>AT5G10550.1 | chr5:3332855-3335232 REVERSE LENGTH=679
Length = 678
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 240 LTAALEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNS 299
+T + + K+MK + F PVD V LG+ DY I+D PMD GT+ NLE+G Y +
Sbjct: 250 MTTCGQILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKG-LYRSP 308
Query: 300 EDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGF 334
D DV+ + N YN KG + + +++ F
Sbjct: 309 IDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQF 343
>AT5G46550.1 | chr5:18884439-18886503 REVERSE LENGTH=495
Length = 494
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 232 ERQRDDRELTA-ALEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNL 290
++QR D + ++ L ++ +M+ F PVDPV + IPDYF++I PMD GT+ L
Sbjct: 61 KKQRLDCDWSSQCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKL 120
Query: 291 ERGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNW 338
+ + Y N+++ DV+ + N YN + + + K + + F W
Sbjct: 121 LK-NVYSNADEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRW 167
>AT1G73150.1 | chr1:27504327-27505996 REVERSE LENGTH=462
Length = 461
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
+ K+MK + FNTPVD V LG+ DY +II PMD GT+ L + Y + + +DV
Sbjct: 127 LTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSKS-LYKSPLEFAEDV 185
Query: 307 QFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 339
+ ++N YN G + + + + F + W+
Sbjct: 186 RLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWV 218
>AT1G17790.1 | chr1:6125532-6127276 REVERSE LENGTH=488
Length = 487
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
+ K+MK +A FN PVD LG+ DY +I+ PMD GT+ L + Y + D +DV
Sbjct: 140 LTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKS-LYKSPLDFAEDV 198
Query: 307 QFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWLAAGLYSD 346
+ ++N YN G + + + F W++ + D
Sbjct: 199 RLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSIEMQYD 238
>AT1G06230.1 | chr1:1907626-1910183 FORWARD LENGTH=767
Length = 766
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
++++MK FN PVD LG+ DY+ II+ PMD GTI L + + Y + + +DV
Sbjct: 429 LERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK-NLYKSPREFAEDV 487
Query: 307 QFIWDNCTKYNSKGDYIIELMKRVKKGFMKNW 338
+ + N YN +G + + + + F + W
Sbjct: 488 RLTFHNAMTYNPEGQDVHLMAVTLLQIFEERW 519
>AT3G27260.1 | chr3:10068411-10072403 FORWARD LENGTH=814
Length = 813
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 259 FNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDVQFIWDNCTKYNS 318
F PVD V L IPDY I PMD GT+ +NL G Y + + DV+ + N YN
Sbjct: 196 FQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASG-VYSSPHEFAADVRLTFTNAMTYNP 254
Query: 319 KGDYIIELMKRVKKGFMKNW 338
G + + + K F W
Sbjct: 255 PGHDVHIMGDILSKLFEARW 274
>AT3G54610.1 | chr3:20213593-20217375 FORWARD LENGTH=569
Length = 568
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 236 DDRELTAALEAIKKVMKMDA-AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGD 294
+ ++L A + A+ K M+ A A PF PVD + +PDY+DII P+D I + +E
Sbjct: 456 NQKQLNALMRALLKTMQDHADAWPFKEPVD--SRDVPDYYDIIKDPIDLKVIAKRVESEQ 513
Query: 295 KYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWLAAGLYS 345
Y+ + D + +++NC YNS + R++ F + AGL S
Sbjct: 514 YYVTLDMFVADARRMFNNCRTYNSPDTIYYKCATRLETHFHSK-VQAGLQS 563
>AT1G20670.1 | chr1:7164537-7167933 REVERSE LENGTH=653
Length = 652
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 244 LEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVY 303
L + ++ K D ++ PVDP L PDYF+II PMDF T+ L+ G Y E
Sbjct: 181 LFILDRLQKKDTYGVYSDPVDPEEL--PDYFEIIKNPMDFSTLRNKLDSG-AYSTLEQFE 237
Query: 304 KDVQFIWDNCTKYNS 318
+DV I N +YNS
Sbjct: 238 RDVFLICTNAMEYNS 252
>AT5G55040.1 | chr5:22327727-22331703 REVERSE LENGTH=917
Length = 916
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 243 ALEAI-KKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSED 301
+LE I K+ K D + PVDP L PDY D+I+ PMDF T+ + L G Y E+
Sbjct: 190 SLELILDKLQKKDIYGVYAEPVDPEEL--PDYHDMIEHPMDFSTVRKKLANGS-YSTLEE 246
Query: 302 VYKDVQFIWDNCTKYNS 318
+ DV I N +YNS
Sbjct: 247 LESDVLLICSNAMQYNS 263
>AT1G76380.2 | chr1:28651416-28654536 REVERSE LENGTH=581
Length = 580
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 247 IKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLERGDKYMNSEDVYKDV 306
+ +V K D ++ P DP L PDY++II PMDF T+ + LE G Y E +DV
Sbjct: 154 LDRVQKKDTYGVYSDPADPEEL--PDYYEIIKNPMDFTTLRKKLESG-AYTTLEQFEQDV 210
Query: 307 QFIWDNCTKYNS 318
I N +YNS
Sbjct: 211 FLICTNAMEYNS 222
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.306 0.125 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,827,039
Number of extensions: 280583
Number of successful extensions: 962
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 957
Number of HSP's successfully gapped: 17
Length of query: 378
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 278
Effective length of database: 8,364,969
Effective search space: 2325461382
Effective search space used: 2325461382
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 112 (47.8 bits)