BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0352200 Os06g0352200|AK071746
(253 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214 192 2e-49
AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215 191 3e-49
AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220 144 5e-35
AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214 138 3e-33
AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208 129 1e-30
AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185 127 5e-30
AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245 116 1e-26
AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244 116 1e-26
AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192 114 6e-26
AT4G28485.1 | chr4:14075321-14076011 REVERSE LENGTH=166 89 3e-18
>AT4G18425.1 | chr4:10181421-10182062 REVERSE LENGTH=214
Length = 213
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 127/177 (71%)
Query: 74 TTRLERTITRAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAA 133
TT +++ I + F++TA LA LPTG VL F++LSP+F+NGG+C V+++MT+ LV +C
Sbjct: 34 TTWIQKAIGQTFQTTAHLANLLPTGTVLAFQLLSPIFSNGGQCDLVSKIMTSTLVAICGF 93
Query: 134 ACFFLCFTDSFHDGKGTVRYVVATRAGLWVIDGTAPPPPDVAATYRLRFIDFFHAVLSLI 193
+CF L FTDS+ D GT+ Y +AT G W+IDG+ P +++ Y+LRFIDF HA +SL
Sbjct: 94 SCFILSFTDSYKDKNGTICYGLATIHGFWIIDGSTTLPQELSKRYKLRFIDFVHAFMSLF 153
Query: 194 VFLSVAMFDHNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGIGFPV 250
VF +V +FD N CF+P S + +VLT +P+ G+ +MLFATFP+TR+GIGFP+
Sbjct: 154 VFGAVVLFDRNAVNCFFPSPSAEALEVLTALPVGVGVFSSMLFATFPTTRNGIGFPL 210
>AT5G46090.1 | chr5:18693485-18694129 FORWARD LENGTH=215
Length = 214
Score = 191 bits (485), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 130/200 (65%)
Query: 51 VQPETEPXXXXXXXXXXXXXXXETTRLERTITRAFRSTAELAKHLPTGAVLVFEVLSPVF 110
++ ET P T +++ I + F++TA LA LPTG VL F++LSP+
Sbjct: 12 IKEETVPLLDDQNRNRDLPDIERNTMMQKAIGKTFQTTANLANLLPTGTVLAFQILSPIC 71
Query: 111 TNGGKCQDVNRVMTAWLVGLCAAACFFLCFTDSFHDGKGTVRYVVATRAGLWVIDGTAPP 170
TN G+C +R MTA LV +C +CF L FTDS+ D G+V Y AT G W+IDG+A
Sbjct: 72 TNVGRCDLTSRFMTALLVSICGFSCFILSFTDSYKDLNGSVCYGFATIHGFWIIDGSATL 131
Query: 171 PPDVAATYRLRFIDFFHAVLSLIVFLSVAMFDHNVGACFYPVMSYDTRQVLTDVPLAGGL 230
P +++ +Y+LRFIDF HA++S +VF +V +FD NV CFYP S + ++LT +P+A G+
Sbjct: 132 PQELSKSYKLRFIDFVHAIMSFLVFGAVVLFDQNVVNCFYPEPSAEVVELLTTLPVAVGV 191
Query: 231 VGTMLFATFPSTRHGIGFPV 250
+M+FA FP+TRHGIGFP+
Sbjct: 192 FCSMVFAKFPTTRHGIGFPL 211
>AT3G02430.1 | chr3:499360-500019 FORWARD LENGTH=220
Length = 219
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 109/176 (61%), Gaps = 4/176 (2%)
Query: 78 ERTITRAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAAACFF 137
+R ++ S A L+ LPTG +L F++L+PVFT+ G C R +TA L+ L AA+CF
Sbjct: 38 QRAMSNTLTSAANLSNLLPTGTLLAFQLLTPVFTSNGVCDHATRFLTAVLLFLLAASCFV 97
Query: 138 LCFTDSFHDGKGTVRYVVATRAGLWVIDGTAPPP---PDVAATYRLRFIDFFHAVLSLIV 194
FTDS GT+ + T G+WV+D P PD+A YR+RF+D+ HA LS++V
Sbjct: 98 SSFTDSVKADDGTIYFGFVTFKGMWVVDYPDPSGLGLPDLAK-YRMRFVDWIHATLSVLV 156
Query: 195 FLSVAMFDHNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGIGFPV 250
F +VA+ D + CFYP +T+ VL VP+ G++ ++LF FP+ RHGIG+ V
Sbjct: 157 FGAVALRDKYITDCFYPSPEAETKHVLDIVPVGVGVMCSLLFMVFPARRHGIGYLV 212
>AT4G24310.1 | chr4:12600900-12601541 FORWARD LENGTH=214
Length = 213
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
Query: 81 ITRAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAAACFFLCF 140
+++ S A LA LPTG +L F +L PVFT+ G C +V+T L+ L + +CF F
Sbjct: 35 MSQTLTSAANLANLLPTGTLLAFTLLIPVFTSNGSCDYPTQVLTIVLLTLLSISCFLSSF 94
Query: 141 TDSFHDGKGTVRYVVATRAGLWVIDGTAPPPPD-----VAATYRLRFIDFFHAVLSLIVF 195
TDS G V Y ATR G+WV D P PD + YR+R ID+ HAVLS++VF
Sbjct: 95 TDSVKAEDGNVYYGFATRKGMWVFDY---PDPDGLGLPNLSKYRIRIIDWIHAVLSVLVF 151
Query: 196 LSVAMFDHNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGIGFPV 250
+VA+ D N +CFYP +T++VL VP+ G++ MLF FP+ RHGIG+PV
Sbjct: 152 GAVALRDKNAVSCFYPAPEQETKKVLDIVPMGVGVICGMLFLVFPARRHGIGYPV 206
>AT3G21520.1 | chr3:7582000-7582623 FORWARD LENGTH=208
Length = 207
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 83 RAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAAACFFLCFTD 142
++ L K LPTG + ++ +L+PV TN G+C N+VM++ LV LC+ +C F CFTD
Sbjct: 25 KSLTGLESLIKLLPTGTLFIYLLLNPVLTNDGECSTGNKVMSSILVALCSFSCVFSCFTD 84
Query: 143 SFHDGKGTVRYVVATRAGLWVIDGTAPPPPDVAATYRLRFIDFFHAVLSLIVFLSVAMFD 202
SF G+ ++ + T+ GLW A P + Y+LR DF HA L VF ++ + D
Sbjct: 85 SFKGVDGSRKFGIVTKKGLWTY---AEPGSVDLSKYKLRIADFVHAGFVLAVFGTLVLLD 141
Query: 203 HNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGIGF 248
N +CFYP + ++ +P A G+ +FA FPS R GIG+
Sbjct: 142 ANTASCFYPRFRETQKTLVMALPPAVGVASATIFALFPSKRSGIGY 187
>AT3G21550.1 | chr3:7591708-7592262 REVERSE LENGTH=185
Length = 184
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 92/168 (54%), Gaps = 7/168 (4%)
Query: 83 RAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAAACFFLCFTD 142
R + +L K LPTG V +F+ L+PV TN G C +N+ +T L+ +CA +C F CFTD
Sbjct: 11 RTYSGVGDLIKLLPTGTVFLFQFLNPVLTNNGHCLLINKYLTGVLIVICAFSCCFTCFTD 70
Query: 143 SFHDGKGTVRYVVATRAGLWVIDGTAPPPPDV-AATYRLRFIDFFHAVLSLIVFLSVAMF 201
S+ G V Y VAT GLW P V ++ RLR DF HA SLIVF +++
Sbjct: 71 SYRTRDGYVHYGVATVKGLW------PDSSSVDLSSKRLRVGDFVHAFFSLIVFSVISLL 124
Query: 202 DHNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGIGFP 249
D N CFYP + L +P G++ +F FPS RHGIG P
Sbjct: 125 DANTVNCFYPGFGSAGKIFLMVLPPVIGVISGAVFTVFPSRRHGIGNP 172
>AT5G39650.1 | chr5:15875265-15875999 FORWARD LENGTH=245
Length = 244
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 81 ITRAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAAACFFLCF 140
+ + T+ L LPTG +L+FE++ P G C +N +M L+ LCA +CFF F
Sbjct: 62 VQKTVSKTSMLVNFLPTGTLLMFEMVLPSIYRDGDCNGINTLMIHLLLLLCAMSCFFFHF 121
Query: 141 TDSFHDGKGTVRYVVATRAGLWVIDGTAPPPP-----DVAAT---------YRLRFIDFF 186
TDSF G + Y T GL V PPPP DV A Y+L DF
Sbjct: 122 TDSFKASDGKIYYGFVTPRGLAVF--MKPPPPEFGGGDVIAEAEIPVTDDRYKLTVNDFV 179
Query: 187 HAVLSLIVFLSVAMFDHNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGI 246
HAV+S++VF+++A D V C +P + QV+ P+ G+V + LF FP+TR+G+
Sbjct: 180 HAVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPIMVGIVCSALFLVFPTTRYGV 239
Query: 247 G 247
G
Sbjct: 240 G 240
>AT1G09157.1 | chr1:2951665-2952396 REVERSE LENGTH=244
Length = 243
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 16/183 (8%)
Query: 79 RTITRAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQDVNRVMTAWLVGLCAAACFFL 138
+ + + T+ L LPTG +L+FE++ P G C +N +M L+ LCA +CFF
Sbjct: 59 KGVQKTVSKTSMLVNFLPTGTLLMFEMVLPTIYRDGDCNGINTLMIHLLLLLCAMSCFFF 118
Query: 139 CFTDSFHDGKGTVRYVVATRAGLWVIDGTAPPPP-----DVAAT---------YRLRFID 184
FTDSF G + Y T GL V PP P DV A Y+LR D
Sbjct: 119 HFTDSFKASDGKIYYGFVTPRGLAVF--MKPPSPGFGGGDVIAEKEIPVTDERYKLRVND 176
Query: 185 FFHAVLSLIVFLSVAMFDHNVGACFYPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRH 244
F H+V+S++VF+++A D V C +P + QV+ PL G+V + LF FP++R+
Sbjct: 177 FVHSVMSVLVFMAIAFSDRRVTGCLFPGKEKEMDQVMESFPLMVGIVCSALFLVFPTSRY 236
Query: 245 GIG 247
G+G
Sbjct: 237 GVG 239
>AT5G27370.1 | chr5:9667311-9667886 FORWARD LENGTH=192
Length = 191
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 99/194 (51%), Gaps = 31/194 (15%)
Query: 77 LERTITRAFRSTAELAKHLPTGAVLVFEVLSPVFTNGGKCQD--VNRVMTAWLVGLCAAA 134
+E + R+ S A LPTG L+FE L P F+NGG+C + VN+++T L+ CAAA
Sbjct: 1 MEASFIRSLPSAGNFANLLPTGTALIFETLLPSFSNGGECNNKPVNKLLTITLISFCAAA 60
Query: 135 CFFLCFTDSFHDGKGTVRYVVATRAGLWVI-----DGTAPPP---PDVAATYRLRFIDFF 186
CFF FTDS+ G + Y +AT GL ++ +G P D Y+L F+DF
Sbjct: 61 CFFSSFTDSYVGQDGRIYYGIATSNGLHILNDYPDEGYDPESGLTADKRERYKLSFVDFV 120
Query: 187 HAVLSLIVFLSVAMFDHNVGACFYP-------------VMSYDTRQVLTDVPLAGGLVGT 233
HA +S+IVFL++A+ + C P ++ Y VLT + +
Sbjct: 121 HAFVSVIVFLALAVESSDFRRCLLPEDDENSWGGHFVLMIKYFAVMVLT--------MAS 172
Query: 234 MLFATFPSTRHGIG 247
FA FPS R GIG
Sbjct: 173 FFFAIFPSKRRGIG 186
>AT4G28485.1 | chr4:14075321-14076011 REVERSE LENGTH=166
Length = 165
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 67/101 (66%)
Query: 150 TVRYVVATRAGLWVIDGTAPPPPDVAATYRLRFIDFFHAVLSLIVFLSVAMFDHNVGACF 209
T RY +AT +GL V+DG+ + Y+L+ +DF HA++S++VF +V+MFD NV C
Sbjct: 62 TARYGLATWSGLLVMDGSITLTEEEKEKYKLKILDFIHAIMSMLVFFAVSMFDQNVTRCL 121
Query: 210 YPVMSYDTRQVLTDVPLAGGLVGTMLFATFPSTRHGIGFPV 250
+PV S +T+++LT +P G++ F FP+ RHGIG P+
Sbjct: 122 FPVPSEETKEILTSLPFVIGVICGAFFLAFPTRRHGIGSPL 162
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,566,559
Number of extensions: 169346
Number of successful extensions: 457
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 447
Number of HSP's successfully gapped: 10
Length of query: 253
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 157
Effective length of database: 8,474,633
Effective search space: 1330517381
Effective search space used: 1330517381
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 110 (47.0 bits)