BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0332400 Os06g0332400|AK101738
(683 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32760.2 | chr4:15799376-15803832 FORWARD LENGTH=677 439 e-123
AT3G08790.1 | chr3:2667881-2671001 FORWARD LENGTH=608 376 e-104
AT1G21380.1 | chr1:7485806-7488032 REVERSE LENGTH=507 303 3e-82
AT1G76970.1 | chr1:28922841-28924854 REVERSE LENGTH=447 291 6e-79
AT2G38410.1 | chr2:16086912-16090047 REVERSE LENGTH=672 273 3e-73
AT5G01760.1 | chr5:291753-294127 FORWARD LENGTH=543 246 4e-65
AT5G63640.1 | chr5:25478935-25481221 FORWARD LENGTH=448 200 2e-51
AT5G16880.1 | chr5:5549658-5551274 FORWARD LENGTH=408 117 2e-26
AT1G06210.1 | chr1:1897567-1898986 FORWARD LENGTH=384 84 3e-16
>AT4G32760.2 | chr4:15799376-15803832 FORWARD LENGTH=677
Length = 676
Score = 439 bits (1130), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/501 (49%), Positives = 308/501 (61%), Gaps = 48/501 (9%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
+ +V+RATSE LIGPDW++NLEICD+LN DP+QAKDVVK IKKRIG +N K Q
Sbjct: 3 NAMVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLL 62
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQ 123
+KNCGD VHMHVAE+ ++HEMV+I KKKPD+HVKEKIL+LIDTWQEAFGG RARYPQ
Sbjct: 63 ETIVKNCGDMVHMHVAEKGVIHEMVRIVKKKPDFHVKEKILVLIDTWQEAFGGPRARYPQ 122
Query: 124 YYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTPEVP 183
YY YQELLRAGAVFPQR + S P++TPPQTQPL + PP LRN + PE S+ PE P
Sbjct: 123 YYAGYQELLRAGAVFPQRSERSAPVFTPPQTQPLTSYPPNLRNAGPGNDVPEPSAEPEFP 182
Query: 184 TLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTD 243
TLSL+EIQNA+G+MDVL+EML+A++PGN+E L+QEV+VDLV+QCR+YKQRVV LVNST+D
Sbjct: 183 TLSLSEIQNAKGIMDVLAEMLSALEPGNKEDLKQEVMVDLVEQCRTYKQRVVHLVNSTSD 242
Query: 244 EELLSQGLSLNDDLQRVLAKHDAIAAGI---AVRVEKPKSVQARG--DKSPSIKPEGAKQ 298
E LL QGL+LNDDLQRVL ++AIA+G+ + ++EKPKS + D + G
Sbjct: 243 ESLLCQGLALNDDLQRVLTNYEAIASGLPGTSSQIEKPKSETGKSLVDVDGPLIDTGDSS 302
Query: 299 PDQRSSEAASTVTPFEQLXXXXXXXXXXXXXXXXXXVGPSIDLLSGDDYFKPEPVNSQAL 358
+ ++S QL IDLLSGDD AL
Sbjct: 303 NQANGATSSSGNGVLNQLALPAPPVTNGSANS-------KIDLLSGDDL---------AL 346
Query: 359 VSVGNP----PAASANNTLDLVDMFAQSNVGNNPNPAVTSSMLNSNPSLS---EPQLYXX 411
V VG P P AS N L L+DMF S+ NNP+PA S NP+ + PQ +
Sbjct: 347 VPVGPPQPASPVASDQNALALIDMF--SDNTNNPSPATAPS---GNPAQNIPLNPQGHQQ 401
Query: 412 XXXXXXXXXXXXXNGLTSNT-MAPYDQPSDINATGS-WNSQFAHGMXXXXXXXXXXXXXX 469
NG + ++QPS S W+SQ A
Sbjct: 402 PNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQ------------QPVQ 449
Query: 470 XNYGQGQDQSGDLPPPPWETQ 490
+Y QD + PPPPWE Q
Sbjct: 450 PSYEGAQDSTA-FPPPPWEAQ 469
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 4/64 (6%)
Query: 624 LSQGMNGLAVQDNSLY---GTSASSSFQQPMRP-SRPEDSLFGDLVSIAKTKPSKTAANK 679
L Q M GL+++D + + +S+++S+ PM+P ++PED LFGDLV I+K KP+K + +
Sbjct: 613 LDQQMYGLSMRDQTSHQVASSSSTTSYLPPMKPKNKPEDKLFGDLVDISKFKPTKPTSGR 672
Query: 680 AGGL 683
AG +
Sbjct: 673 AGTM 676
>AT3G08790.1 | chr3:2667881-2671001 FORWARD LENGTH=608
Length = 607
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/385 (52%), Positives = 256/385 (66%), Gaps = 38/385 (9%)
Query: 6 LVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXXX 65
LVDRATS+ LIGPDW++NLEICD+LNH+P Q ++VV IKKR+ + SK+Q
Sbjct: 5 LVDRATSDMLIGPDWAMNLEICDMLNHEPGQTREVVSGIKKRLTSRTSKVQLLALTLLET 64
Query: 66 XIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQYY 125
I NCG+ +HM VAE+DILH+MVK+AK+KP+ VKEKILILIDTWQE+F G + R+PQYY
Sbjct: 65 IITNCGELIHMQVAEKDILHKMVKMAKRKPNIQVKEKILILIDTWQESFSGPQGRHPQYY 124
Query: 126 VAYQELLRAGAVFPQRPDSSVPIYTPP--QTQPLRNLPPALRNTERQQEAPESSSTPEVP 183
AYQELLRAG VFPQRP TP Q P P RN +QEA ++S+ E P
Sbjct: 125 AAYQELLRAGIVFPQRPQ-----ITPSSGQNGPSTRYPQNSRNA--RQEAIDTSTESEFP 177
Query: 184 TLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTD 243
TLSLTEIQNARG+MDVL+EM+NAID N+EGL+QEV+VDLV QCR+YKQRVV LVNST+D
Sbjct: 178 TLSLTEIQNARGIMDVLAEMMNAIDGNNKEGLKQEVVVDLVSQCRTYKQRVVHLVNSTSD 237
Query: 244 EELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSVQARGDKSPSIKPEGAKQPDQRS 303
E +L QGL+LNDDLQR+LAKH+AIA+G ++ ++ KS + + I G+ + S
Sbjct: 238 ESMLCQGLALNDDLQRLLAKHEAIASGNSMIKKEEKSKKEVPKDTTQIIDVGSSETKNGS 297
Query: 304 SEAASTVTPFEQLXXXXXXXXXXXXXXXXXXVGPSIDLLSGDDYFKPEPVNSQALVSVGN 363
A +T GP IDLLSGDD+ P NS ALV +G
Sbjct: 298 VVAYTT-------------------------NGPKIDLLSGDDFETPNADNSLALVPLGP 332
Query: 364 P----PAASANNTLDLVDMFAQSNV 384
P P A +N++ L+DM + +N
Sbjct: 333 PQPSSPVAKPDNSIVLIDMLSDNNC 357
>AT1G21380.1 | chr1:7485806-7488032 REVERSE LENGTH=507
Length = 506
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/280 (52%), Positives = 202/280 (72%), Gaps = 7/280 (2%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
+ +RAT++ LIGPDW++N+E+CDI+N +PSQAK+ VK +KKR+G KNSK+Q
Sbjct: 6 AACAERATNDMLIGPDWAINIELCDIINMEPSQAKEAVKVLKKRLGSKNSKVQILALYAL 65
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQ 123
KNCG+ V+ + +RDIL +MVKI KKKPD V+EKIL L+DTWQEAFGGS R+PQ
Sbjct: 66 ETLSKNCGESVYQLIVDRDILPDMVKIVKKKPDLTVREKILSLLDTWQEAFGGSGGRFPQ 125
Query: 124 YYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSS--TPE 181
YY AY EL AG FP R +SSVP +TPPQTQP+ + T ++A +S + +
Sbjct: 126 YYNAYNELRSAGIEFPPRTESSVPFFTPPQTQPI-----VAQATASDEDAAIQASLQSDD 180
Query: 182 VPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNST 241
LS+ EIQ+A+G +DVL++ML A+DP + EGL++E+IVDLV+QCR+Y++RV+ LVN+T
Sbjct: 181 ASALSMEEIQSAQGSVDVLTDMLGALDPSHPEGLKEELIVDLVEQCRTYQRRVMALVNTT 240
Query: 242 TDEELLSQGLSLNDDLQRVLAKHDAIAAGIAVRVEKPKSV 281
+DEEL+ QGL+LND+LQRVL HD A G +V P +
Sbjct: 241 SDEELMCQGLALNDNLQRVLQHHDDKAKGNSVPATAPTPI 280
>AT1G76970.1 | chr1:28922841-28924854 REVERSE LENGTH=447
Length = 446
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 142/265 (53%), Positives = 188/265 (70%), Gaps = 11/265 (4%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
+ +RAT++ LIGPDW++N+E+CD++N DPSQAK+ VK +KKR+G KNSK+Q
Sbjct: 6 AACAERATNDMLIGPDWAINIELCDLINMDPSQAKEAVKVLKKRLGSKNSKVQILALYAL 65
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQ 123
KNCG+ V+ + +R +L++MVKI KKKP+ +V+EKIL L+DTWQEAFGG RYPQ
Sbjct: 66 ETLSKNCGENVYQLIIDRGLLNDMVKIVKKKPELNVREKILTLLDTWQEAFGGRGGRYPQ 125
Query: 124 YYVAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTPEVP 183
YY AY +L AG FP R +SS+ +TPPQTQP + S +
Sbjct: 126 YYNAYNDLRSAGIEFPPRTESSLSFFTPPQTQP-----------DEDAAIQASLQGDDAS 174
Query: 184 TLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTD 243
+LSL EIQ+A G +DVL +ML A DPGN E L++EVIVDLV+QCR+Y++RV+ LVN+TTD
Sbjct: 175 SLSLEEIQSAEGSVDVLMDMLGAHDPGNPESLKEEVIVDLVEQCRTYQRRVMTLVNTTTD 234
Query: 244 EELLSQGLSLNDDLQRVLAKHDAIA 268
EELL QGL+LND+LQ VL +HD IA
Sbjct: 235 EELLCQGLALNDNLQHVLQRHDDIA 259
>AT2G38410.1 | chr2:16086912-16090047 REVERSE LENGTH=672
Length = 671
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 203/330 (61%), Gaps = 48/330 (14%)
Query: 8 DRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXXXXI 67
D+ATS+ L+GPDW+ N+EICD +N QAKDVVK++KKR+ HK+S++Q +
Sbjct: 13 DKATSDLLLGPDWTTNMEICDSVNSLHWQAKDVVKAVKKRLQHKSSRVQLLALTLLETLV 72
Query: 68 KNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQYYVA 127
KNCGD++H VAE++IL EMVKI KKK D V++KIL+++D+WQ+AFGG +YPQYY A
Sbjct: 73 KNCGDYLHHQVAEKNILGEMVKIVKKKADMQVRDKILVMVDSWQQAFGGPEGKYPQYYWA 132
Query: 128 YQELLRAGAVFPQRPDSSVPIYTPPQTQ-PLR------NLPPALRNTERQQEA------- 173
Y EL R+G FP+R + PI TPP + PLR +PPA +
Sbjct: 133 YDELRRSGVEFPRRSPDASPIITPPVSHPPLRQPQGGYGVPPAGYGVHQAGYGVPQAGYG 192
Query: 174 ----------------------PESSS-------TPEVPTLSLTEIQNARGVMDVLSEML 204
P SS EV LSL+ I++ R VMD+L +ML
Sbjct: 193 IPQAGYGVPQAGYGIPQVGYGMPSGSSRRLDEAMATEVEGLSLSSIESMRDVMDLLGDML 252
Query: 205 NAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTDEELLSQGLSLNDDLQRVLAKH 264
A+DP +RE ++ EVIVDLV++CRS +++++Q++ ST D+ELL +GL LND LQ +LAKH
Sbjct: 253 QAVDPSDREAVKDEVIVDLVERCRSNQKKLMQMLTSTGDDELLGRGLDLNDSLQILLAKH 312
Query: 265 DAIAAGIAVRVE---KPKSVQAR--GDKSP 289
DAIA+G + V+ P SVQA D SP
Sbjct: 313 DAIASGSPLPVQASGSPLSVQASKPADSSP 342
>AT5G01760.1 | chr5:291753-294127 FORWARD LENGTH=543
Length = 542
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 185/273 (67%), Gaps = 5/273 (1%)
Query: 4 SVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXX 63
+V VD+ATSE L PDW++ + ICD LN + Q KD +K++K+R+ HK+S++Q
Sbjct: 23 TVAVDKATSELLRTPDWTIIIAICDSLNSNRWQCKDAIKAVKRRLQHKSSRVQLLTLTLL 82
Query: 64 XXXIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQ 123
+KNCGDFVH H+AE+ +L +MVK+ +KK D+ V+ K+LIL+DTW EAF G ++P
Sbjct: 83 EAMLKNCGDFVHSHIAEKHLLEDMVKLVRKKGDFEVRNKLLILLDTWNEAFSGVACKHPH 142
Query: 124 YYVAYQELLRAGAVFPQRPDSSVPIYT---PPQTQPLRNLPPALRNTERQQEAPESSSTP 180
Y AYQEL R G FPQR + P+ PP TQ + L + + E+ +T
Sbjct: 143 YNWAYQELKRCGVKFPQRSKEA-PLMLEPPPPVTQSSSSSSMNLMSIGSFRRLDETMATE 201
Query: 181 EVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNS 240
SL+ +++ R VMD++++M+ A++P ++ L+ E+IVDLV+QCRS +++++Q++ +
Sbjct: 202 IESL-SLSSLESMRNVMDLVNDMVQAVNPSDKSALKDELIVDLVEQCRSNQKKLIQMLTT 260
Query: 241 TTDEELLSQGLSLNDDLQRVLAKHDAIAAGIAV 273
T DE++L++GL LND LQ VLA+HDAIA+G+++
Sbjct: 261 TADEDVLARGLELNDSLQVVLARHDAIASGVSL 293
>AT5G63640.1 | chr5:25478935-25481221 FORWARD LENGTH=448
Length = 447
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 160/266 (60%), Gaps = 4/266 (1%)
Query: 6 LVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXXXXX 65
LV ATSE L DW+ N+EIC++ D QAKDV+K+IKKR+G KN Q
Sbjct: 5 LVSSATSEKLADVDWAKNIEICELAARDERQAKDVIKAIKKRLGSKNPNTQLYAVQLLEM 64
Query: 66 XIKNCGDFVHMHVAERDILHEMVKIAKKKPDYHVKEKILILIDTWQEAFGGSRARYPQYY 125
+ N G+ +H V + +L +VKI KKK D V+E+I +L+D Q + GG+ ++PQYY
Sbjct: 65 LMNNIGENIHKQVIDTGVLPTLVKIVKKKSDLPVRERIFLLLDATQTSLGGASGKFPQYY 124
Query: 126 VAYQELLRAGAVFPQRPDSSVPIYTPPQTQPLRNLPPALRNTERQQEAPESSSTPEVPTL 185
AY EL+ AG F QRP+++ P+ Q P L L + + E P ++ E ++
Sbjct: 125 TAYYELVNAGVKFTQRPNAT-PVVVTAQAVPRNTLNEQLASA--RNEGPATTQQRESQSV 181
Query: 186 SLTEI-QNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYKQRVVQLVNSTTDE 244
S + I Q A +++L E+L+A+D N EG + E +DLV+QC K+RV+ LV ++ DE
Sbjct: 182 SPSSILQKASTALEILKEVLDAVDSQNPEGAKDEFTLDLVEQCSFQKERVMHLVMTSRDE 241
Query: 245 ELLSQGLSLNDDLQRVLAKHDAIAAG 270
+ +S+ + LN+ LQR+L +H+ + +G
Sbjct: 242 KAVSKAIELNEQLQRILNRHEDLLSG 267
>AT5G16880.1 | chr5:5549658-5551274 FORWARD LENGTH=408
Length = 407
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 21/277 (7%)
Query: 2 PQSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXX 61
P +V+ AT+E+L PDW +NLEICD++N + + ++++ IKKRI K +IQ
Sbjct: 47 PTDKIVEDATTENLEEPDWDMNLEICDMINQETINSVELIRGIKKRIMMKQPRIQYLALV 106
Query: 62 XXXXXIKNCGDFVHMHVAERDILHEMVK-IAKKKPDYHVKEKILILIDTWQEAFGGSRAR 120
+KNC AER +L EMVK I + + + K L+LI+ W E+ S R
Sbjct: 107 LLETCVKNCEKAFSEVAAER-VLDEMVKLIDDPQTVVNNRNKALMLIEAWGES--TSELR 163
Query: 121 Y-PQYYVAYQELLRAGAVFPQRPDSSV-PIYTPPQTQPLRNLPPALRNTERQQEAPESSS 178
Y P + Y+ L G FP R + S+ PI+TP ++ P P L N + Q E +
Sbjct: 164 YLPVFEETYKSLKARGIRFPGRDNESLAPIFTPARSTP----APEL-NADLPQHVHEPAH 218
Query: 179 TP-EVPTLSLTEIQN------ARGVMDVLSEMLNAIDPGNREGLRQEVIVDLVDQCRSYK 231
+VP S T Q AR +++LS +L++ + L+ ++ LV QCR +
Sbjct: 219 IQYDVPVRSFTAEQTKEAFDIARNSIELLSTVLSS--SPQHDALQDDLTTTLVQQCRQSQ 276
Query: 232 QRVVQLVNST-TDEELLSQGLSLNDDLQRVLAKHDAI 267
V +++ + +E LL + L++ND+L + L+K++ +
Sbjct: 277 TTVQRIIETAGENEALLFEALNVNDELVKTLSKYEEM 313
>AT1G06210.1 | chr1:1897567-1898986 FORWARD LENGTH=384
Length = 383
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 32/281 (11%)
Query: 3 QSVLVDRATSESLIGPDWSLNLEICDILNHDPSQAKDVVKSIKKRIGHKNSKIQXXXXXX 62
+S +VD AT E+L P+W +N+ IC +N+D ++V++IK++I K+ Q
Sbjct: 38 ESKMVDEATLETLEEPNWGMNMRICAQINNDEFNGTEIVRAIKRKISGKSPVSQRLSLEL 97
Query: 63 XXXXIKNCGDFVHMHVAERDILHEMVKIAKK-KPDYHVKEKILILIDTWQEAFGGSRARY 121
NC + V VA +L EMV + K + D +++ LI W ++
Sbjct: 98 LEACAMNC-EKVFSEVASEKVLDEMVWLIKNGEADSENRKRAFQLIRAWGQS--QDLTYL 154
Query: 122 PQYYVAYQELLRAGAVFPQRPDSSVPIYT-------------PPQTQPLRNLPPALRNTE 168
P ++ Y L + + ++S+P + PP + P+ N AL
Sbjct: 155 PVFHQTYMSLEGENGLHARGEENSMPGQSSLESLMQRPVPVPPPGSYPVPNQEQAL---- 210
Query: 169 RQQEAPESSSTPEVPTLSLTE----IQNARGVMDVLSEMLNAIDPGNREGLRQEVIVDLV 224
+ LS+ + I+ R +++LS MLN G ++ V L+
Sbjct: 211 ----GDDDGLDYNFGNLSIKDKKEQIEITRNSLELLSSMLNT--EGKPNHTEDDLTVSLM 264
Query: 225 DQCRSYKQRVVQLVNSTTDEE-LLSQGLSLNDDLQRVLAKH 264
++C+ + + ++ STTD+E +L + L LND+LQ+VL+ +
Sbjct: 265 EKCKQSQPLIQMIIESTTDDEGVLFEALHLNDELQQVLSSY 305
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,824,687
Number of extensions: 484404
Number of successful extensions: 1423
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 1410
Number of HSP's successfully gapped: 12
Length of query: 683
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 578
Effective length of database: 8,227,889
Effective search space: 4755719842
Effective search space used: 4755719842
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)