BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0319600 Os06g0319600|AY785763
(769 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17980.1 | chr1:6187742-6191418 REVERSE LENGTH=714 725 0.0
AT2G25850.2 | chr2:11026123-11030440 REVERSE LENGTH=801 651 0.0
AT4G32850.8 | chr4:15850134-15854443 FORWARD LENGTH=766 650 0.0
AT3G06560.1 | chr3:2044443-2047034 FORWARD LENGTH=508 274 1e-73
>AT1G17980.1 | chr1:6187742-6191418 REVERSE LENGTH=714
Length = 713
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/494 (70%), Positives = 393/494 (79%), Gaps = 1/494 (0%)
Query: 22 MAKSNNGNGYLGVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLD 81
MA GV+EPIS+ GPTE DV++T+E+EK L D GLYES+EEAV REEVLG LD
Sbjct: 1 MASVQQNGQRFGVSEPISMGGPTEFDVIKTRELEKHLQDVGLYESKEEAVRREEVLGILD 60
Query: 82 QIVKAWIKKATRASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEY 141
QIVK WIK +RA G DQ + EANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATR
Sbjct: 61 QIVKTWIKTISRAKGLNDQLLHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREGD 120
Query: 142 FFQALYDMLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDS 201
FF L ML +MPEVTELHPVPDAHVP++ FKLNGVSIDLLYA L VIPEDLDLS DS
Sbjct: 121 FFGELQRMLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDS 180
Query: 202 ILHNVDEQTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGIN 261
IL N DEQTVRSLNGCRVTD+ILRLVPNI FRTTLR MRFWAKRRGVYSNV GFLGGIN
Sbjct: 181 ILQNADEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGIN 240
Query: 262 WALLVARICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRD 321
WALLVARICQLYPNA P++L+SRFF+V+ +W WPN + LC +EGSLGL VWDPR N +D
Sbjct: 241 WALLVARICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKD 300
Query: 322 RGHHMPIITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFF 381
R H MPIITPAYP MNSSYNVS ST +M EF R ++IC+A++ KADWD LFEP+ FF
Sbjct: 301 RLHIMPIITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFF 360
Query: 382 ESYRNYLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRP 441
E+Y+NYL+I+I+A N DDLR WKGWVESRLR L LKIER + ML HP+P DF D+SRP
Sbjct: 361 EAYKNYLQIDISAANVDDLRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSRP 419
Query: 442 LHCFYFMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPS 501
LHC YFMGL +KQ A E EQ+DIR V EFK ++AY W GMEI V H+KR+ +P+
Sbjct: 420 LHCSYFMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPN 479
Query: 502 FVFPGGIRPSRPSR 515
FVFPGG+RPS S+
Sbjct: 480 FVFPGGVRPSHTSK 493
>AT2G25850.2 | chr2:11026123-11030440 REVERSE LENGTH=801
Length = 800
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/491 (60%), Positives = 376/491 (76%), Gaps = 1/491 (0%)
Query: 33 GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 92
G+TEP+S++GP+ DV R E+EK L D GLYES+EE + REEV+ ++DQIVK W+K+ T
Sbjct: 24 GITEPLSIAGPSAADVKRNLELEKFLVDEGLYESKEETMRREEVVVRIDQIVKHWVKQLT 83
Query: 93 RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 152
R G+ DQ V++ANA IFTFGSYRLGVHGP ADIDTLCVGP + R E FF D+L +
Sbjct: 84 RQRGYTDQMVEDANAVIFTFGSYRLGVHGPMADIDTLCVGPSYVNREEDFFIFFRDILAE 143
Query: 153 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 212
M EVTEL PV DAHVPV+KFK G+SIDLLYA+++ +VIP+DLD+S+ S+L +VDEQTVR
Sbjct: 144 MEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDEQTVR 203
Query: 213 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 272
SLNGCRV D+IL+LVPN FRTTLR +++WAK+RGVYSNV GFLGG+NWALLVAR+CQ
Sbjct: 204 SLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQF 263
Query: 273 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 332
YPNA PSML+SRFF+VY++W+WPNPVMLC IEE L VWDPR+N RDR H MPIITPA
Sbjct: 264 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPA 323
Query: 333 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 392
YP MNSSYNVS ST VM ++F + ICQ I+ K W +LF+ Y FFE+Y+NYL++++
Sbjct: 324 YPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDV 383
Query: 393 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLW 451
A + +DL WKGWVESR R L LKIER T ML+ HP P +++D+S+ HC +FMGL
Sbjct: 384 LAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQ 443
Query: 452 KKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 511
+ QE +Q+DIR V+EF+ ++ Y WR GM++ VSHV+R+ +PSFVFP G + S
Sbjct: 444 RADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRS 503
Query: 512 RPSRTVGKEAR 522
R SR ++ R
Sbjct: 504 RQSRHQSQQCR 514
>AT4G32850.8 | chr4:15850134-15854443 FORWARD LENGTH=766
Length = 765
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/484 (60%), Positives = 376/484 (77%), Gaps = 1/484 (0%)
Query: 33 GVTEPISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKAT 92
G+T+P+SL+GP+ D+ R E+EK L D GLYES+++ + REEVLG++DQIVK W+K+ T
Sbjct: 22 GITKPLSLAGPSSADIKRNVELEKYLVDEGLYESKDDTMRREEVLGRIDQIVKHWVKQLT 81
Query: 93 RASGFGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVD 152
+ G+ DQ V++ANA IFTFGSYRLGVHGPGADIDTLCVGP + R E FF L+D+L +
Sbjct: 82 QQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILAE 141
Query: 153 MPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVR 212
M EVTELHPVPDAHVPV+KFK G+ IDLLYA+++ +V+P+DLD+S S+L VDE TVR
Sbjct: 142 MEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDEPTVR 201
Query: 213 SLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQL 272
SLNGCRV D+IL+LVPN FRTTLR +++WAK+RGVYSNV GFLGG+NWALLVAR+CQL
Sbjct: 202 SLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQL 261
Query: 273 YPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPA 332
YPNA PSML+SRFF+VY++W+WPNPVMLC IEE LG VWD R+N RDR H MPIITPA
Sbjct: 262 YPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPA 321
Query: 333 YPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEI 392
YP MNSSYNVS ST VM ++F ++I Q I+ K W +LFE Y FFE+Y+NYL+++I
Sbjct: 322 YPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDI 381
Query: 393 TARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRP-LHCFYFMGLW 451
A + +DL WKGWVESR R L LKIER T ML+ HP P +++D++R LHC +FMGL
Sbjct: 382 VAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQ 441
Query: 452 KKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPS 511
+ + QE +Q+DIR V+EF+ ++ Y W+ GM++ VSHV+R+ +P FVFP G R
Sbjct: 442 RAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRP 501
Query: 512 RPSR 515
R SR
Sbjct: 502 RQSR 505
>AT3G06560.1 | chr3:2044443-2047034 FORWARD LENGTH=508
Length = 507
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 264/494 (53%), Gaps = 29/494 (5%)
Query: 54 VEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASGFGDQFVQEANAKIFTFG 113
+ + + + GL S E+ V R V+ +L +IV W+K + NA I +G
Sbjct: 21 LRQLMVNEGLIPSLEDEVKRRGVINQLRKIVVRWVKNVAWQHRLPQNQIDATNATILPYG 80
Query: 114 SYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEVTELHPVPDAHVPVLKFK 173
SY LGV+G +DID LC+GP A+ E FF +L DML EV+ELH V DA VP+++FK
Sbjct: 81 SYGLGVYGSESDIDALCIGPFFASIAEDFFISLRDMLKSRREVSELHCVKDAKVPLIRFK 140
Query: 174 LNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNGCRVTDKILRLVPNILTF 233
+G+ +DL YA L + IP ++D+ + L ++DE + + L+G R IL+LVP++ F
Sbjct: 141 FDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDETSWKILSGVRANKCILQLVPSLELF 200
Query: 234 RTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNASPSMLISRFFKVYSKWK 293
++ LR ++ WAKRRGVY N+ GFLGG++ A+L A +C PNA+ S L++ FF ++ W+
Sbjct: 201 QSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPNATLSSLLANFFYTFAHWQ 260
Query: 294 WPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSSYNVSISTRHVMVQE 353
WP PV+L S G MPI P + ++ ST + +V E
Sbjct: 261 WPTPVVLLEDTYPSTG-----------APPGLMPIQLPCGSHQYCNSTITRSTFYKIVAE 309
Query: 354 FTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDDLRNWKGWVESRLRT 413
F ++ + + W LFE YP+ +Y + KI ++A N++DL +W GWV+SR R
Sbjct: 310 FLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRC 369
Query: 414 LVLKIERFTREMLLSHPNPRDFIDS-SRPLHCFYFMGLWKKQISQAQEAEQYDIRAIVNE 472
L++KIE + PNP +++++ ++ + ++ GL + I+ + DI ++ +
Sbjct: 370 LLIKIEEVYG---ICDPNPTEYVETYTKQPNIVFYWGLQLRTINVS------DIESVKID 420
Query: 473 FKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVGKEARAVSRSNISAN 532
F N+++ I+++ VK +P G + S+ V K I +
Sbjct: 421 FLKNVNSGSFRGTVGRIQLTLVKASQLPK---NGECGSNNRSKKVTKTCW-----RIRED 472
Query: 533 VQERNVPSMAQPMP 546
Q NVP ++ +P
Sbjct: 473 KQCNNVPVYSKHLP 486
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,205,991
Number of extensions: 758918
Number of successful extensions: 1873
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1869
Number of HSP's successfully gapped: 4
Length of query: 769
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 663
Effective length of database: 8,200,473
Effective search space: 5436913599
Effective search space used: 5436913599
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)