BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0313900 Os06g0313900|AK064443
(501 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26570.1 | chr2:11299565-11302076 FORWARD LENGTH=808 270 9e-73
AT4G33390.1 | chr4:16075282-16077706 FORWARD LENGTH=780 227 1e-59
AT5G42880.1 | chr5:17191758-17194091 FORWARD LENGTH=752 148 6e-36
AT1G45545.1 | chr1:17180615-17182957 REVERSE LENGTH=753 138 8e-33
>AT2G26570.1 | chr2:11299565-11302076 FORWARD LENGTH=808
Length = 807
Score = 270 bits (691), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 190/516 (36%), Positives = 304/516 (58%), Gaps = 36/516 (6%)
Query: 3 VKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHST 62
VK+E + + Y+ L+ ++D+++ K + A+ S+ + VEELT+EL K LE AH++
Sbjct: 304 VKEELETLHKEYDALVQDKDVAVKKVEEAMLASKEVEKTVEELTIELIATKESLESAHAS 363
Query: 63 CHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLKL 122
+AE+ ++A D+D+ +W+ +L+QAEEEL +L ++I S ++LKS LDT++ LLL L
Sbjct: 364 HLEAEEQRIGAAMARDQDTHRWEKELKQAEEELQRLNQQIHSSKDLKSKLDTASALLLDL 423
Query: 123 KNELAGYVEAKPIDKEA----------QGNITQRSLHNEVILSTRELEECLMSVDKVRDE 172
K EL Y+E+K + +EA N++ LH V + +ELEE ++++K E
Sbjct: 424 KAELVAYMESK-LKQEACDSTTNTDPSTENMSHPDLHAAVASAKKELEEVNVNIEKAAAE 482
Query: 173 VCALNVAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKES 232
V L +A++SL+ EL KEK+ LA++KQ E +SIA AS+ EI E+ +VQ+KEK++
Sbjct: 483 VSCLKLASSSLQLELEKEKSTLASIKQREGMASIAVASIEAEIDRTRSEIASVQSKEKDA 542
Query: 233 RNGMLGLQKIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEM 292
R M+ L K ++ A+EADE+KS+A A+E+LRKAKE+ + AK+ TME R+ A KE+
Sbjct: 543 REKMVELPKQLQQAAEEADEAKSLAEVAREELRKAKEEAEQAKAGASTMESRLFAAQKEI 602
Query: 293 EATKESMRLAIDALRPF-DSELPVDIEEQGS-QIVTVDLDEYQSLIAKSSKAEELVHERT 350
EA K S RLA+ A++ +SE + + S + VT+ L+EY L ++ +AEEL + R
Sbjct: 603 EAAKASERLALAAIKALEESESTLKANDTDSPRSVTLSLEEYYELSKRAHEAEELANARV 662
Query: 351 ASAIAQAKIAKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWR 410
A+A+++ + AK ++ ++ RK+AL ATE+A++A EGKL +EQELRKWR
Sbjct: 663 AAAVSRIEEAKETEMRSLEKLEEVNRDMDARKKALKEATEKAEKAKEGKLGVEQELRKWR 722
Query: 411 EENEQRRKAGEALKSQLN---------PSSTPVIIVERXXXXXXXXXXXXYASVHPLLDM 461
E+EQ+RKAG+ + ++ N +P +V YAS
Sbjct: 723 AEHEQKRKAGDGVNTEKNLKESFEGGKMEQSPEAVV--------------YASSPSESYG 768
Query: 462 SARSTPNDXXXXXXXXXXXXXXFFPRITMFFTRKKS 497
+ ++ + FPR MF ++KKS
Sbjct: 769 TEENSETNLSPQTKSRKKKKKLSFPRFFMFLSKKKS 804
>AT4G33390.1 | chr4:16075282-16077706 FORWARD LENGTH=780
Length = 779
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 277/511 (54%), Gaps = 44/511 (8%)
Query: 3 VKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHST 62
VK+E +Q Y+ L+ E+D+++ +A+ AV S+ RKVEELT+EL K LE AHS+
Sbjct: 295 VKEELQTLQNEYDALVKEKDLAVKEAEEAVIASKEVERKVEELTIELIATKESLECAHSS 354
Query: 63 CHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLKL 122
+AE+H ++ D+++ +W+ +L+QAEEEL +L + + S +EL+ L+ ++ LLL L
Sbjct: 355 HLEAEEHRIGAAMLRDQETHRWEKELKQAEEELQRLKQHLVSTKELQVKLEFASALLLDL 414
Query: 123 KNELAGYVEAKPIDKEAQGNITQR----------SLHNEVILSTRELEECLMSVDKVRDE 172
K ELA + E+ + +E + + V + +ELEE +V+K E
Sbjct: 415 KKELADHKESSKVKEETSETVVTNIEISLQEKTTDIQKAVASAKKELEEVNANVEKATSE 474
Query: 173 VCALNVAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKES 232
V L VA++SL+ E+ KEK+AL ++KQ E +S+ ASL EI + E+ V++KEKE+
Sbjct: 475 VNCLKVASSSLRLEIDKEKSALDSLKQREGMASVTVASLEAEIDITRCEIALVKSKEKET 534
Query: 233 RNGMLGLQKIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEM 292
R M+ L K ++ ++EADE+KS A A+E+LRK++E+ + AK+ TME R+ A KE+
Sbjct: 535 REEMVELPKQLQQASQEADEAKSFAELAREELRKSQEEAEQAKAGASTMESRLFAAQKEI 594
Query: 293 EATKESMRLAIDALRPF------DSELPVDIEEQGSQIVTVDLDEYQSLIAKSSKAEELV 346
EA K S RLA+ A++ E VD + VT+ ++EY L ++ +AEE
Sbjct: 595 EAIKASERLALAAIKALQESESSSKENAVD----SPRTVTLTIEEYYELSKRAHEAEEAA 650
Query: 347 HERTASAIAQAKIAKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQEL 406
+ R A+A+++ AK +K + +RK L A E+A++A EGKL +EQEL
Sbjct: 651 NARVAAAVSEVGEAKETEKRSLEKLEEVNKEMVERKATLAGAMEKAEKAKEGKLGVEQEL 710
Query: 407 RKWREENEQRRKAGEALKSQLNPSSTPVIIVERXXXXXXXXXXXXYASVHPLLDMSARST 466
RKWRE +E++RK G + + S E V+P+
Sbjct: 711 RKWREVSEKKRKNGSSHGKSIQGSKEK----EAETSVSNETETNPIPQVNPV-------- 758
Query: 467 PNDXXXXXXXXXXXXXXFFPRITMFFTRKKS 497
FPR MF +KKS
Sbjct: 759 ------------KKKKKLFPRFFMFLMKKKS 777
>AT5G42880.1 | chr5:17191758-17194091 FORWARD LENGTH=752
Length = 751
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 227/420 (54%), Gaps = 30/420 (7%)
Query: 3 VKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHST 62
V++E V Y+ +L E++++ +A +AV ++ R ++ L++EL K LE H+
Sbjct: 273 VREEIEMVSNEYKDMLREKELAAERADIAVLEAKEIERTMDGLSIELIATKELLESVHTA 332
Query: 63 CHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLKL 122
+AE+ ++A D+D W+ +L+ E ++ +L +++ + +++K+ L+T++ L L
Sbjct: 333 HLEAEEKRFSVAMARDQDVYNWEKELKMVENDIERLNQEVRAADDVKAKLETASALQHDL 392
Query: 123 KNELAGYVEAKPIDKEAQGNI--TQRSLHNEVILSTRELEECLMSVDKVRDEVCALNVAA 180
K ELA + + + GN+ + +H V + RELEE +++K EV L + A
Sbjct: 393 KTELAAFTDI------SSGNLLLEKNDIHAAVESARRELEEVKANIEKAASEVKKLKIIA 446
Query: 181 ASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGMLGLQ 240
SL++EL +E+ L KQ E+T LA + +K++ ++
Sbjct: 447 GSLQSELGRERQDLEETKQKESTG------------LA-------RTNDKDAGEELVETA 487
Query: 241 KIMEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATKESMR 300
K +E KEA+++K++A ++++LR AKE + AK + T+E R+ KEMEA + S +
Sbjct: 488 KKLEQATKEAEDAKALATASRDELRMAKELSEQAKRGMSTIESRLVEAKKEMEAARASEK 547
Query: 301 LAIDALRPF-DSELPVDIEE--QGSQIVTVDLDEYQSLIAKSSKAEELVHERTASAIAQA 357
LA+ A++ ++E EE + + + ++EY L ++ ++EE + R + ++Q
Sbjct: 548 LALAAIKALQETESSQRFEEINNSPRSIIISVEEYYELSKQALESEEEANTRLSEIVSQI 607
Query: 358 KIAKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREENEQRR 417
++AK ++ + RK L A +A++A +GKL MEQELRKWR EN +RR
Sbjct: 608 EVAKEEESRILEKLEEVNREMSVRKAELKEANGKAEKARDGKLGMEQELRKWRSENGKRR 667
>AT1G45545.1 | chr1:17180615-17182957 REVERSE LENGTH=753
Length = 752
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 242/498 (48%), Gaps = 45/498 (9%)
Query: 3 VKDESGKVQENYETLLIERDISIGKAQLAVSMSEGAVRKVEELTVELNRLKVELELAHST 62
+++E V YE+LL E+D++ KA+ +V ++ +++E LT+E+ K LELAH+T
Sbjct: 294 IREEIEMVSNEYESLLTEKDLAAKKAEDSVLKAKDVEKQMEGLTMEVIATKQLLELAHAT 353
Query: 63 CHDAEKHSKDTSLACDEDSLKWKSDLRQAEEELNQLAKKISSIEELKSTLDTSTGLLLKL 122
+A++ D ++A D+D + +L+ E+E+ + + I + +++K+ L T++ L L
Sbjct: 354 HLEAQEKKLDAAMARDQDVYNQEKELKMVEDEIKRFRQDIDAADDVKTKLKTASALQQDL 413
Query: 123 KNELAGYVEAKPIDKEAQGNITQRSLHNEVILSTRELEECLMSVDKVRDEVCALNVAAAS 182
+ E+A Y ++ G + V + +ELEE + +++K EV L + S
Sbjct: 414 RAEIAAYKDSN------MGKRNNSDIQAAVDSARKELEEVISNIEKANSEVKTLKIIVGS 467
Query: 183 LKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRNGMLGLQKI 242
L++EL +EK L+ +Q + +E + K
Sbjct: 468 LQSELAREKHDLSETRQ--------------------------RNREDTREEKCTEIAKK 501
Query: 243 MEDTAKEADESKSIAREAQEKLRKAKEDMDHAKSCLDTMEFRIQAVLKEMEATKESMRLA 302
+++ ++EA+E+KS+A A+E+LRKAKE+ D AK+ L +E ++ KEMEA++ S +LA
Sbjct: 502 LQEASREAEEAKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEMEASRASEKLA 561
Query: 303 IDALRPF-DSELPVDIEE--QGSQIVTVDLDEYQSLIAKSSKAEELVHERTASAIAQAKI 359
+ A++ ++E IE+ + + + ++EY L ++ + EE + + A +++ ++
Sbjct: 562 LAAIKALQETEYANKIEDISSSPKSIIISVEEYYELSKQAHEVEEAANRKLAEIVSKIEV 621
Query: 360 AKXXXXXXXXXXXXXHKVLEQRKQALVAATERADRATEGKLAMEQELRKWREENEQRRKA 419
AK + RK L A + ++A +GK+ M+ ELRKWR +N R
Sbjct: 622 AKEEESRILENLEEVSRETAIRKVELKEAMTKVEKARDGKVGMDHELRKWRSDNGNRSPE 681
Query: 420 GEALKSQLNPSSTPVIIVERXXXXXXXXXXXXYASVHPLLDMSARSTPNDXXXXXXXXXX 479
G K L+ S + + ++V P S+ N
Sbjct: 682 G-GNKENLSKSKSAL----HQPTTFTFGEQASSSNVTP-----QASSSNVTPETETKKKK 731
Query: 480 XXXXFFPRITMFFTRKKS 497
P++ MF +RKKS
Sbjct: 732 KRFSLLPKVFMFLSRKKS 749
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.310 0.124 0.319
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,129,006
Number of extensions: 294943
Number of successful extensions: 2124
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 2076
Number of HSP's successfully gapped: 43
Length of query: 501
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 398
Effective length of database: 8,282,721
Effective search space: 3296522958
Effective search space used: 3296522958
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 114 (48.5 bits)