BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0303800 Os06g0303800|AK100772
         (137 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28280.2  | chr4:14010785-14011487 FORWARD LENGTH=161          102   8e-23
AT2G20700.1  | chr2:8925003-8925714 REVERSE LENGTH=164             98   1e-21
AT5G56170.1  | chr5:22736072-22737108 FORWARD LENGTH=169           96   7e-21
AT4G26466.1  | chr4:13367645-13368629 REVERSE LENGTH=166           92   7e-20

>AT4G28280.2 | chr4:14010785-14011487 FORWARD LENGTH=161
          Length = 160

 Score =  102 bits (253), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 71/125 (56%), Gaps = 5/125 (4%)

Query: 8   RSLLQAKGGCPVSFENQNYTTITSKCKSP-WPADLCCPALNEFACNFSQYINDESTNCAE 66
           R+LLQAK  C   F  +NYT ITSKCK P +PA +CC A  +FAC F++ +NDE T+CA 
Sbjct: 39  RALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCSAFKDFACPFAEVLNDEKTDCAS 98

Query: 67  SMWVYLNAHGSYPAGLFSNECAVLDCNGNNSTISTNQTANGSGTRGAKGISEMYSLVTTL 126
           +M+ Y+N +G YP G+F+N C      G      T+ T   S       +S    L+T  
Sbjct: 99  TMFSYINLYGRYPPGIFANMCK----EGKEGLDCTDVTPTSSSHASIPLVSTHVLLITVS 154

Query: 127 IVSGL 131
           I+  L
Sbjct: 155 ILFHL 159



>AT2G20700.1 | chr2:8925003-8925714 REVERSE LENGTH=164
          Length = 163

 Score = 98.2 bits (243), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 79/134 (58%), Gaps = 6/134 (4%)

Query: 2   GTSMNRRSLLQAKGGCPVSFENQNYTTITSKCKSP-WPADLCCPALNEFACNFSQYINDE 60
           G +   R+LLQ +  C   F N+NYT ITS+CK P +PA++CC A  +FAC F++ +NDE
Sbjct: 29  GHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPANVCCSAFKDFACPFAEVLNDE 88

Query: 61  STNCAESMWVYLNAHGSYPAGLFSNECAV----LDC-NGNNSTISTNQTANGSGTRGAKG 115
             +CA +M+ Y+N +G YP G+F+N C      LDC +   S  +T+ +   + T  +  
Sbjct: 89  KNDCASTMFSYINLYGRYPPGIFANMCKEGKEGLDCTDVTQSASATSDSIPRASTTASLA 148

Query: 116 ISEMYSLVTTLIVS 129
           +   + ++  L +S
Sbjct: 149 VLSTFLVLCLLFLS 162



>AT5G56170.1 | chr5:22736072-22737108 FORWARD LENGTH=169
          Length = 168

 Score = 95.9 bits (237), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)

Query: 8   RSLLQAKGGCPVSFENQNYTTITSKCKSP-WPADLCCPALNEFACNFSQYINDESTNCAE 66
           R+LLQ K  CPV+FE  NYT ITSKCK P +P   CC A  +FAC ++  +ND S++CA 
Sbjct: 40  RNLLQTKKTCPVNFEFMNYTIITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCAT 99

Query: 67  SMWVYLNAHGSYPAGLFSNEC 87
           +M+ Y+N +G YP GLF+N+C
Sbjct: 100 TMFSYINLYGKYPPGLFANQC 120



>AT4G26466.1 | chr4:13367645-13368629 REVERSE LENGTH=166
          Length = 165

 Score = 92.4 bits (228), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 1/86 (1%)

Query: 3   TSMNRRSLLQAKGGCPVSFENQNYTTITSKCKSP-WPADLCCPALNEFACNFSQYINDES 61
           TS++ R+L  AK  C V+FE  +Y  +T +CK P +PA  CC A  EFAC +   IND +
Sbjct: 32  TSVSGRNLRHAKKKCEVNFEYMDYKVLTKRCKGPAFPAKECCSAFKEFACPYVSQINDMN 91

Query: 62  TNCAESMWVYLNAHGSYPAGLFSNEC 87
           ++CA++M+ Y+N +G+YP GLF+NEC
Sbjct: 92  SDCAQTMFSYMNIYGNYPTGLFANEC 117



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.130    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,060,558
Number of extensions: 122624
Number of successful extensions: 303
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 4
Length of query: 137
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 49
Effective length of database: 8,693,961
Effective search space: 426004089
Effective search space used: 426004089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 106 (45.4 bits)