BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0303400 Os06g0303400|Os06g0303400
(766 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G05710.1 | chr2:2141591-2146350 FORWARD LENGTH=991 1061 0.0
AT4G35830.1 | chr4:16973007-16977949 REVERSE LENGTH=899 1035 0.0
AT4G26970.1 | chr4:13543077-13548427 FORWARD LENGTH=996 1018 0.0
AT4G13430.1 | chr4:7804194-7807789 REVERSE LENGTH=510 72 1e-12
>AT2G05710.1 | chr2:2141591-2146350 FORWARD LENGTH=991
Length = 990
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/729 (70%), Positives = 589/729 (80%), Gaps = 24/729 (3%)
Query: 33 QDNTGVPAIVDLAAMRDVMAKLGCDPYQINPLIPXXXXXXXXXXXXXXRSHDALDKNMEL 92
QD TGVPA+VDLA MRD M KLG D +INPL+P RS +A+ NMEL
Sbjct: 182 QDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEL 241
Query: 93 EFDRNKERFGFLKWASTAFHKMQVFPPGSGIVHQVNLEYLARVVFNADGIMYPDSVVGTD 152
EF RNKERF FLKW STAF M V PPGSGIVHQVNLEYL RVVFN G++YPDSVVGTD
Sbjct: 242 EFQRNKERFAFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTKGLLYPDSVVGTD 301
Query: 153 SHTTMINSLGVAGWGVGGIEAIVAMLGQPMDMVLPGVVGFKLSGMLRDGVTATDLVLTIT 212
SHTTMI+ LGVAGWGVGGIEA MLGQPM MVLPGVVGFKL+G +R+GVTATDLVLT+T
Sbjct: 302 SHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGVVGFKLAGKMRNGVTATDLVLTVT 361
Query: 213 QMLRKHGVVGKFVEFYGVGVGELSLPARATIANMSPEYGASMGFFPVDHVTLDYLKLTGR 272
QMLRKHGVVGKFVEFYG G+ LSL RATIANMSPEYGA+MGFFPVDHVTL YLKLTGR
Sbjct: 362 QMLRKHGVVGKFVEFYGNGMSGLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGR 421
Query: 273 SNETVSMIEAYLRANNMFVEHHEPHTERVYSSYLELNLIDVEPCISGPKRPHDRVPLKEM 332
S+ETV+MIEAYLRANNMFV+++EP +RVYSSYLELNL DVEPCISGPKRPHDRV LKEM
Sbjct: 422 SDETVAMIEAYLRANNMFVDYNEPQQDRVYSSYLELNLDDVEPCISGPKRPHDRVTLKEM 481
Query: 333 KSDWHACLDSRVGFKGFAVPRECQDKVVKFDFQGQPAEIKHGSVVLAAICSSTNTSNPSV 392
K+DWH+CLDS+VGFKGFA+P+E Q+KVV F F GQPAE+KHGSVV+AAI S TNTSNPSV
Sbjct: 482 KADWHSCLDSKVGFKGFAIPKEAQEKVVNFSFDGQPAELKHGSVVIAAITSCTNTSNPSV 541
Query: 393 IVGAGLVAKKACELGLEGLPFRFRSKNRSSPVYRKQVKPWVKTSFTHGSAVTREYLKHSH 452
++GAGLVAKKAC+LGL QVKPW+KTS GS V +YL S
Sbjct: 542 MLGAGLVAKKACDLGL-------------------QVKPWIKTSLAPGSGVVTKYLLKSG 582
Query: 453 LQDYLNQQGFHLAAFGCATCVGNSGDLDESVSAAITENDIVSVAVLSANRNFEGRVHPLT 512
LQ+YLN+QGF++ +GC TC+GNSG+++ESV AAITENDIV+ AVLS NRNFEGRVHPLT
Sbjct: 583 LQEYLNEQGFNIVGYGCTTCIGNSGEINESVGAAITENDIVAAAVLSGNRNFEGRVHPLT 642
Query: 513 RANYLASPPLVVAYALAGTVDIDFEKEPIGHGKDGNEVYLRDIWPTNEEIEQVVKSSVLP 572
RANYLASPPLVVAYALAGTV+IDFE EPIG GK+G +V+LRDIWPT EEI +VV+SSVLP
Sbjct: 643 RANYLASPPLVVAYALAGTVNIDFETEPIGKGKNGKDVFLRDIWPTTEEIAEVVQSSVLP 702
Query: 573 HMFTQTYESIKRCNRRWNELRVPGEAAALYPWDPSSTYIRKPPYLEGMAMSPPSRPRSVR 632
MF TYESI + N WN+L VP LY WDP+STYI +PPY + M M PP P +V+
Sbjct: 703 DMFRATYESITKGNPMWNKLSVP--ENTLYSWDPNSTYIHEPPYFKDMTMDPPG-PHNVK 759
Query: 633 DAYCLLNLGDSVTTDHISYSGSITPGSAAAEYLRAAGVADRERLGSYGGRRGNDEVVVRG 692
DAYCLLN GDS+TTDHIS +G+I S AA++L GV DR+ SYG RRGNDE++ RG
Sbjct: 760 DAYCLLNFGDSITTDHISPAGNIQKDSPAAKFLMERGV-DRKDFNSYGSRRGNDEIMARG 818
Query: 693 AFANARIVNKLMNGKVGPKTVHVPTGEELCVFDAAIKYKSEGHNMVIVIAGAEYGSGSSR 752
FAN RIVNKLMNG+VGPKTVH+P+GE+L VFDAA++YKS G + I++AGAEYGSGSSR
Sbjct: 819 TFANIRIVNKLMNGEVGPKTVHIPSGEKLSVFDAAMRYKSSGED-TIILAGAEYGSGSSR 877
Query: 753 DSAAKGPML 761
D AAKGPML
Sbjct: 878 DWAAKGPML 886
>AT4G35830.1 | chr4:16973007-16977949 REVERSE LENGTH=899
Length = 898
Score = 1035 bits (2675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/730 (68%), Positives = 580/730 (79%), Gaps = 24/730 (3%)
Query: 33 QDNTGVPAIVDLAAMRDVMAKLGCDPYQINPLIPXXXXXXXXXXXXXXRSHDALDKNMEL 92
QD TGVPA+VDLA MRD M LG D +INPL+P RS +A+ NMEL
Sbjct: 90 QDFTGVPAVVDLACMRDAMNNLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMEL 149
Query: 93 EFDRNKERFGFLKWASTAFHKMQVFPPGSGIVHQVNLEYLARVVFNADGIMYPDSVVGTD 152
EF RNKERF FLKW S AFH M V PPGSGIVHQVNLEYLARVVFN +G++YPDSVVGTD
Sbjct: 150 EFQRNKERFAFLKWGSNAFHNMLVVPPGSGIVHQVNLEYLARVVFNTNGLLYPDSVVGTD 209
Query: 153 SHTTMINSLGVAGWGVGGIEAIVAMLGQPMDMVLPGVVGFKLSGMLRDGVTATDLVLTIT 212
SHTTMI+ LGVAGWGVGGIEA MLGQPM MVLPGVVGFKL+G LRDG+TATDLVLT+T
Sbjct: 210 SHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGVVGFKLTGKLRDGMTATDLVLTVT 269
Query: 213 QMLRKHGVVGKFVEFYGVGVGELSLPARATIANMSPEYGASMGFFPVDHVTLDYLKLTGR 272
QMLRKHGVVGKFVEF+G G+ ELSL RATIANMSPEYGA+MGFFPVDHVTL YL+LTGR
Sbjct: 270 QMLRKHGVVGKFVEFHGEGMRELSLADRATIANMSPEYGATMGFFPVDHVTLQYLRLTGR 329
Query: 273 SNETVSMIEAYLRANNMFVEHHEPHTERVYSSYLELNLIDVEPCISGPKRPHDRVPLKEM 332
S++TVSMIEAYLRAN MFV++ EP ++ VYSS LELNL DVEPC+SGPKRPHDRVPLKEM
Sbjct: 330 SDDTVSMIEAYLRANKMFVDYSEPESKTVYSSCLELNLEDVEPCVSGPKRPHDRVPLKEM 389
Query: 333 KSDWHACLDSRVGFKGFAVPRECQDKVVKFDFQGQPAEIKHGSVVLAAICSSTNTSNPSV 392
K+DWH+CLD+RVGFKGFAVP+E Q K V+F+F G A+++HG VV+AAI S TNTSNPSV
Sbjct: 390 KADWHSCLDNRVGFKGFAVPKEAQSKAVEFNFNGTTAQLRHGDVVIAAITSCTNTSNPSV 449
Query: 393 IVGAGLVAKKACELGLEGLPFRFRSKNRSSPVYRKQVKPWVKTSFTHGSAVTREYLKHSH 452
++GA LVAKKAC+LGLE VKPW+KTS GS V +YL S
Sbjct: 450 MLGAALVAKKACDLGLE-------------------VKPWIKTSLAPGSGVVTKYLAKSG 490
Query: 453 LQDYLNQQGFHLAAFGCATCVGNSGDLDESVSAAITENDIVSVAVLSANRNFEGRVHPLT 512
LQ YLNQ GF + +GC TC+GNSGD+ E+V++AI +ND+V+ AVLS NRNFEGRVHPLT
Sbjct: 491 LQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGNRNFEGRVHPLT 550
Query: 513 RANYLASPPLVVAYALAGTVDIDFEKEPIGHGKDGNEVYLRDIWPTNEEIEQVVKSSVLP 572
RANYLASPPLVVAYALAGTVDIDFE +PIG GKDG +++ RDIWP+N+E+ +VV+SSVLP
Sbjct: 551 RANYLASPPLVVAYALAGTVDIDFETQPIGTGKDGKQIFFRDIWPSNKEVAEVVQSSVLP 610
Query: 573 HMFTQTYESIKRCNRRWNELRVPGEAAALYPWDPSSTYIRKPPYLEGMAMSPPSRPRSVR 632
MF TYE+I + N WN+L V + LY WDP STYI +PPY +GM MSPP P V+
Sbjct: 611 DMFKATYEAITKGNSMWNQLSV--ASGTLYEWDPKSTYIHEPPYFKGMTMSPPG-PHGVK 667
Query: 633 DAYCLLNLGDSVTTDHISYSGSITPGSAAAEYLRAAGVADRERLGSYGGRRGNDEVVVRG 692
DAYCLLN GDS+TTDHIS +GSI S AA+YL GV DR SYG RRGNDE++ RG
Sbjct: 668 DAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGV-DRRDFNSYGSRRGNDEIMARG 726
Query: 693 AFANARIVNKLMNGKVGPKTVHVPTGEELCVFDAAIKYKSEGHNMVIVIAGAEYGSGSSR 752
FAN RIVNK + G+VGPKTVH+PTGE+L VFDAA+KY++EG + I++AGAEYGSGSSR
Sbjct: 727 TFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRD-TIILAGAEYGSGSSR 785
Query: 753 DSAAKGPMLL 762
D AAKGPMLL
Sbjct: 786 DWAAKGPMLL 795
>AT4G26970.1 | chr4:13543077-13548427 FORWARD LENGTH=996
Length = 995
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/730 (68%), Positives = 572/730 (78%), Gaps = 24/730 (3%)
Query: 33 QDNTGVPAIVDLAAMRDVMAKLGCDPYQINPLIPXXXXXXXXXXXXXXRSHDALDKNMEL 92
QD TGVP +VDLA+MRD + LG DP +INPL+P RS DA KN+EL
Sbjct: 187 QDFTGVPVLVDLASMRDAVKNLGSDPSKINPLVPVDLVVDHSIQVDFARSEDAAQKNLEL 246
Query: 93 EFDRNKERFGFLKWASTAFHKMQVFPPGSGIVHQVNLEYLARVVFNADGIMYPDSVVGTD 152
EF RNKERF FLKW STAF M V PPGSGIVHQVNLEYL RVVFN+ G +YPDSVVGTD
Sbjct: 247 EFKRNKERFTFLKWGSTAFQNMLVVPPGSGIVHQVNLEYLGRVVFNSKGFLYPDSVVGTD 306
Query: 153 SHTTMINSLGVAGWGVGGIEAIVAMLGQPMDMVLPGVVGFKLSGMLRDGVTATDLVLTIT 212
SHTTMI+ LGVAGWGVGGIEA AMLGQPM MVLPGVVGFKL G L++GVTATDLVLT+T
Sbjct: 307 SHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLDGKLKEGVTATDLVLTVT 366
Query: 213 QMLRKHGVVGKFVEFYGVGVGELSLPARATIANMSPEYGASMGFFPVDHVTLDYLKLTGR 272
Q+LRKHGVVGKFVEFYG G+ ELSL RATIANMSPEYGA+MGFFPVDHVTL+YLKLTGR
Sbjct: 367 QILRKHGVVGKFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLEYLKLTGR 426
Query: 273 SNETVSMIEAYLRANNMFVEHHEPHTERVYSSYLELNLIDVEPCISGPKRPHDRVPLKEM 332
S+ETVSMIE+YLRANNMFV+++EP ER Y+SYL+L+L VEPCISGPKRPHDRVPLK+M
Sbjct: 427 SDETVSMIESYLRANNMFVDYNEPQQERAYTSYLQLDLGHVEPCISGPKRPHDRVPLKDM 486
Query: 333 KSDWHACLDSRVGFKGFAVPRECQDKVVKFDFQGQPAEIKHGSVVLAAICSSTNTSNPSV 392
K+DWHACLD+ VGFKGFAVP+E Q++VVKF + GQPAEIKHGSVV+AAI S TNTSNPSV
Sbjct: 487 KADWHACLDNPVGFKGFAVPKEKQEEVVKFSYNGQPAEIKHGSVVIAAITSCTNTSNPSV 546
Query: 393 IVGAGLVAKKACELGLEGLPFRFRSKNRSSPVYRKQVKPWVKTSFTHGSAVTREYLKHSH 452
++GA LVAKKA +LGL +VKPWVKTS GS V +YL S
Sbjct: 547 MIGAALVAKKASDLGL-------------------KVKPWVKTSLAPGSRVVEKYLDRSG 587
Query: 453 LQDYLNQQGFHLAAFGCATCVGNSGDLDESVSAAITENDIVSVAVLSANRNFEGRVHPLT 512
L++ L +QGF + +GC TC+GNSG+LD V++AI DI+ AVLS NRNFEGRVHP T
Sbjct: 588 LRESLTKQGFEIVGYGCTTCIGNSGNLDPEVASAIEGTDIIPAAVLSGNRNFEGRVHPQT 647
Query: 513 RANYLASPPLVVAYALAGTVDIDFEKEPIGHGKDGNEVYLRDIWPTNEEIEQVVKSSVLP 572
RANYLASPPLVVAYALAGTVDIDFEKEPIG DG VYLRD+WP+NEE+ QVV+ SVLP
Sbjct: 648 RANYLASPPLVVAYALAGTVDIDFEKEPIGTRSDGKSVYLRDVWPSNEEVAQVVQYSVLP 707
Query: 573 HMFTQTYESIKRCNRRWNELRVPGEAAALYPWDPSSTYIRKPPYLEGMAMSPPSRPRSVR 632
MF +YE+I N WNEL P ++ LY WDP+STYI +PPY + M +PP PR V+
Sbjct: 708 SMFKSSYETITEGNPLWNELSAP--SSTLYSWDPNSTYIHEPPYFKNMTANPPG-PREVK 764
Query: 633 DAYCLLNLGDSVTTDHISYSGSITPGSAAAEYLRAAGVADRERLGSYGGRRGNDEVVVRG 692
DAYCLLN GDSVTTDHIS +G+I S AA++L GV E SYG RRGNDEV+ RG
Sbjct: 765 DAYCLLNFGDSVTTDHISPAGNIQKTSPAAKFLMDRGVIS-EDFNSYGSRRGNDEVMARG 823
Query: 693 AFANARIVNKLMNGKVGPKTVHVPTGEELCVFDAAIKYKSEGHNMVIVIAGAEYGSGSSR 752
FAN RIVNKL+ G+VGP TVH+PTGE+L VFDAA KYK+ + I++AGAEYGSGSSR
Sbjct: 824 TFANIRIVNKLLKGEVGPNTVHIPTGEKLSVFDAASKYKTAEQD-TIILAGAEYGSGSSR 882
Query: 753 DSAAKGPMLL 762
D AAKGP+LL
Sbjct: 883 DWAAKGPLLL 892
>AT4G13430.1 | chr4:7804194-7807789 REVERSE LENGTH=510
Length = 509
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 126 QVNLEY--LARVVFNADGIMYPDSVV-GTDSHTTMINSLGVAGWGVGGIEAIVAMLGQPM 182
+ N +Y + V +G P V+ GTDSHT + G G+G +A + +
Sbjct: 170 KANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKI 229
Query: 183 DMVLPGVVGFKLSGMLRDGVTATDLVLTITQMLRKHGVVGKFVEFYGVGVGELSLPARAT 242
+ +P + F L G + + A DL+L I + G K +EF G + LS+ R T
Sbjct: 230 LLKVPPTMRFILDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMT 289
Query: 243 IANMSPEYGASMGFFPVDHVTLDYLKLTGRSNETVSMIEAYLRANNMFVEHHEPHTERVY 302
+ NM E G G P D TL+Y++ + +V Y N FV +
Sbjct: 290 LCNMVVEAGGKNGVIPPDATTLNYVE----NRTSVPFEPVYSDGNASFVADY-------- 337
Query: 303 SSYLELNLIDVEPCISGPKRPHDRVPLKEMK 333
++ +EP ++ P P +R +E K
Sbjct: 338 ----RFDVSKLEPVVAKPHSPDNRALARECK 364
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,067,795
Number of extensions: 738824
Number of successful extensions: 1514
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1496
Number of HSP's successfully gapped: 4
Length of query: 766
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 660
Effective length of database: 8,200,473
Effective search space: 5412312180
Effective search space used: 5412312180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)