BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0298700 Os06g0298700|Os06g0298700
(345 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67730.1 | chr1:25391676-25393365 FORWARD LENGTH=319 187 1e-47
AT1G24470.1 | chr1:8674056-8676277 FORWARD LENGTH=313 158 3e-39
AT3G47360.1 | chr3:17451112-17452843 FORWARD LENGTH=310 68 6e-12
AT3G47350.2 | chr3:17446848-17449703 FORWARD LENGTH=322 66 2e-11
AT5G50690.1 | chr5:20621330-20622638 FORWARD LENGTH=300 62 3e-10
AT5G50590.1 | chr5:20587988-20589296 FORWARD LENGTH=300 62 3e-10
AT5G50700.1 | chr5:20623259-20624995 REVERSE LENGTH=350 60 2e-09
AT5G50600.1 | chr5:20589917-20591653 REVERSE LENGTH=350 60 2e-09
AT3G03330.1 | chr3:783572-786148 REVERSE LENGTH=329 59 4e-09
AT1G63380.1 | chr1:23505582-23506504 FORWARD LENGTH=283 56 2e-08
AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653 55 4e-08
AT4G10020.1 | chr4:6268363-6270179 FORWARD LENGTH=390 55 5e-08
AT5G10050.1 | chr5:3144254-3145643 FORWARD LENGTH=280 55 6e-08
AT1G62610.4 | chr1:23181531-23182454 REVERSE LENGTH=283 51 1e-06
AT5G65205.1 | chr5:26050926-26052017 REVERSE LENGTH=286 50 2e-06
AT5G06060.1 | chr5:1824066-1825833 REVERSE LENGTH=265 50 2e-06
AT2G17845.1 | chr2:7758846-7759881 FORWARD LENGTH=313 50 2e-06
AT1G24360.1 | chr1:8640820-8643283 FORWARD LENGTH=320 49 3e-06
AT1G10310.1 | chr1:3381733-3383874 REVERSE LENGTH=243 49 3e-06
AT3G26770.1 | chr3:9845494-9847079 FORWARD LENGTH=307 49 3e-06
AT5G04900.1 | chr5:1434826-1437194 FORWARD LENGTH=349 49 5e-06
AT5G04070.1 | chr5:1102238-1104192 FORWARD LENGTH=360 49 5e-06
>AT1G67730.1 | chr1:25391676-25393365 FORWARD LENGTH=319
Length = 318
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 153/258 (59%), Gaps = 22/258 (8%)
Query: 16 APPWWFLSLVFLGAAYVATVTLRLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRAM 75
+ P W L L LG+ + LL R K+LR RYG+WA+ITGPT G+G+A
Sbjct: 9 SQPTWLLILFVLGSISIFKFIFTLLRSFYIYFLRPSKNLR-RYGSWAIITGPTDGIGKAF 67
Query: 76 ALELARRGLNLVLVGRDPANLEEISNTVRSLHG-VETKTVVFDLSLVATPHGDEPLRQLR 134
A +LA++GLNL+LV R+P L+++S+++RS + + TVV D S DE +++++
Sbjct: 68 AFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFS----GDIDEGVKRIK 123
Query: 135 ETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGR 194
E++EGLDVG+L+NNAG+ P Y HE D E ++++N+ T+VT AVLP M++R +
Sbjct: 124 ESIEGLDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNMLKRKK 183
Query: 195 GAVVNIGSASSQAIPSFPLCTIYSATKRHVRGSFLP-----------EPSPRAPFFVATR 243
GA++N+GS ++ IPS+P ++Y+ K +V F + + P +VAT+
Sbjct: 184 GAIINMGSGAAALIPSYPFYSVYAGAKTYV-DQFTKCLHVEYKKSGIDVQCQVPLYVATK 242
Query: 244 MVENLAEARRLSPFTVTP 261
M + RR S +P
Sbjct: 243 M----TKIRRASFLVASP 256
>AT1G24470.1 | chr1:8674056-8676277 FORWARD LENGTH=313
Length = 312
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 144/258 (55%), Gaps = 19/258 (7%)
Query: 16 APPWWFLSLVFLGAAYVATVT-LRLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRA 74
+ PW+ + F+G ++ V + LL + PK L+ RYG+WA++TG T G+GRA
Sbjct: 9 SQPWYLHFVCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLK-RYGSWAMVTGATEGIGRA 67
Query: 75 MALELARRGLNLVLVGRDPANLEEISNTVRS-LHGVETKTVVFDLSLVATPHGDEPLRQL 133
A ELA+ GLNL+LV R+ + LE +S+ + ++ K + FD S + +
Sbjct: 68 FAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFS------SEGGYGAI 121
Query: 134 RETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERG 193
E ++GL+VG+L+NN G+ P + HE D W +++RVNL A T VT +++ M+ R
Sbjct: 122 EEGIKGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRR 181
Query: 194 RGAVVNIGSASSQAIPSFPLCTIYSATKRHVRG----------SFLPEPSPRAPFFVATR 243
RGA+VNI S ++ +PS PL IY+ATK +V F + + P +V+TR
Sbjct: 182 RGAIVNISSGAAVVVPSHPLYAIYAATKAYVDALSRSLHVEYKQFGIDVQCQVPLYVSTR 241
Query: 244 MVENLAEARRLSPFTVTP 261
MV +A + S F +P
Sbjct: 242 MVSEVAAIDKPSLFVPSP 259
>AT3G47360.1 | chr3:17451112-17452843 FORWARD LENGTH=310
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 17/202 (8%)
Query: 22 LSLVFLGAAYVATVTLRLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRAMALELAR 81
L+++FL Y + ++L+ L +LH + + +ITG +SG+G +A E A+
Sbjct: 15 LTIIFLFLFYPFYLLIKLVLCLRKNLHFENVARKV-----VLITGASSGIGEHVAYEYAK 69
Query: 82 RGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLV--ATPHGDEPLRQLRETVEG 139
+G L LV R LE ++ T R L + D+S V DE +R +
Sbjct: 70 KGAYLALVARRRDRLEIVAETSRQLGSGNVIIIPGDVSNVEDCKKFIDETIRHFGK---- 125
Query: 140 LDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGRGAVVN 199
+ L+NNAGV + + + ++ +M +N W T +T +P + + +G +V
Sbjct: 126 --LDHLINNAGVFQTVL-FEDFTQIQDANPIMDINFWGTTYITYFAIPHL-RKSKGKIVA 181
Query: 200 IGSASSQAIPSFPLCTIYSATK 221
I S S+ IP PL +IY+A+K
Sbjct: 182 ITSGSAN-IP-LPLASIYAASK 201
>AT3G47350.2 | chr3:17446848-17449703 FORWARD LENGTH=322
Length = 321
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 17 PPWWFLSLVFLGAAYVATVTLRLLAYLAFSLHRQPKDLRSRYGAWAVITGPTSGMGRAMA 76
PP LV Y+ T + L +L F + G +ITG +SG+G +A
Sbjct: 13 PPLTISFLVLFYPFYLFTKLMSCLKHLHF---------ENVTGKVVLITGASSGIGEHVA 63
Query: 77 LELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVATPHGDEPLRQLRET 136
E A++G L LV R LE ++ T R L + + D+S V ++ + + ET
Sbjct: 64 YEYAKKGAKLALVARRKDRLEIVAETSRQLGSGDVIIIPGDVSNV-----EDCKKFIDET 118
Query: 137 VEGL-DVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGRG 195
+ + L+NNAGV + + + ++ +M +N W T +T +P + + +G
Sbjct: 119 IHHFGKLDHLINNAGVPQTVI-FEDFTQIQDANSIMDINFWGSTYITYFAIPHL-RKSKG 176
Query: 196 AVVNIGSASSQAIPSFPLCTIYSATK 221
+V I SA+ AI ++YSA+K
Sbjct: 177 KIVVISSAT--AIIPLQAASVYSASK 200
>AT5G50690.1 | chr5:20621330-20622638 FORWARD LENGTH=300
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 32 VATVTLRLLAYLAFSLH-------RQPKDLRSRYGAWAVITGPTSGMGRAMALELARRGL 84
+ TV+ LL ++ FS+ R K+ G +ITG +SG+G +A E ARRG
Sbjct: 14 IVTVSF-LLVFMPFSIFFKLLQFIRGCKESEKVNGKVVIITGSSSGIGEHLAYEYARRGA 72
Query: 85 NLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVATPHGDEPLRQLRETVEGLD-VG 143
L LV R L+ +++ R L + V D+S++ + R ++ET+ +
Sbjct: 73 YLTLVARREDRLQVVADRCRKLGSPDVAVVRGDVSVI-----KDCKRFVQETISRFGRLD 127
Query: 144 VLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGRGAVVNIGSA 203
L+NNAG+ E A + +++ + ++ N W T +P + ++ +G ++ + S
Sbjct: 128 HLVNNAGIAE-AKFFEDYSEISDVLPIVNTNFWGPVYATHFAIPHL-KKTKGKIIAVASP 185
Query: 204 SSQAIPSFPLCTIYSATK 221
+ + P +IY+A+K
Sbjct: 186 AGWS--GVPRMSIYAASK 201
>AT5G50590.1 | chr5:20587988-20589296 FORWARD LENGTH=300
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 32 VATVTLRLLAYLAFSLH-------RQPKDLRSRYGAWAVITGPTSGMGRAMALELARRGL 84
+ TV+ LL ++ FS+ R K+ G +ITG +SG+G +A E ARRG
Sbjct: 14 IVTVSF-LLVFMPFSIFFKLLQFIRGCKESEKVNGKVVIITGSSSGIGEHLAYEYARRGA 72
Query: 85 NLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVATPHGDEPLRQLRETVEGLD-VG 143
L LV R L+ +++ R L + V D+S++ + R ++ET+ +
Sbjct: 73 YLTLVARREDRLQVVADRCRKLGSPDVAVVRGDVSVI-----KDCKRFVQETISRFGRLD 127
Query: 144 VLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEVTAAVLPGMVERGRGAVVNIGSA 203
L+NNAG+ E A + +++ + ++ N W T +P + ++ +G ++ + S
Sbjct: 128 HLVNNAGIAE-AKFFEDYSEISDVLPIVNTNFWGPVYATHFAIPHL-KKTKGKIIAVASP 185
Query: 204 SSQAIPSFPLCTIYSATK 221
+ + P +IY+A+K
Sbjct: 186 AGWS--GVPRMSIYAASK 201
>AT5G50700.1 | chr5:20623259-20624995 REVERSE LENGTH=350
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 58 YGAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFD 117
YG +ITG +SG+G +A E A RG L L R LEE++ R L TV D
Sbjct: 46 YGKVVLITGASSGIGEQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHAD 105
Query: 118 LSLVATPHGDEPLRQLRETVEGLD-VGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLW 176
+S D+ R + +T+ + L+NNAG+ + +M + + D+ ++ N W
Sbjct: 106 VS-----KPDDCRRIVDDTITHFGRLDHLVNNAGMTQISM-FENIEDITRTKAVLDTNFW 159
Query: 177 AVTEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATK 221
T A LP + + G +V + +SS A + P + Y+A+K
Sbjct: 160 GSVYTTRAALP-YLRQSNGKIVAM--SSSAAWLTAPRMSFYNASK 201
>AT5G50600.1 | chr5:20589917-20591653 REVERSE LENGTH=350
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 58 YGAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFD 117
YG +ITG +SG+G +A E A RG L L R LEE++ R L TV D
Sbjct: 46 YGKVVLITGASSGIGEQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHAD 105
Query: 118 LSLVATPHGDEPLRQLRETVEGLD-VGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLW 176
+S D+ R + +T+ + L+NNAG+ + +M + + D+ ++ N W
Sbjct: 106 VS-----KPDDCRRIVDDTITHFGRLDHLVNNAGMTQISM-FENIEDITRTKAVLDTNFW 159
Query: 177 AVTEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATK 221
T A LP + + G +V + +SS A + P + Y+A+K
Sbjct: 160 GSVYTTRAALP-YLRQSNGKIVAM--SSSAAWLTAPRMSFYNASK 201
>AT3G03330.1 | chr3:783572-786148 REVERSE LENGTH=329
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 64 ITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVV-FDLSLVA 122
ITG + G+G +A + A L+L R+ A L+ + + ++ E V+ DL+
Sbjct: 48 ITGASRGIGEILAKQFASLDAKLILSARNKAELDRVKSELKGKFAPEDVKVLPLDLA--- 104
Query: 123 TPHGDEPLRQLRET----VEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAV 178
G+E L+ + E G V L++NA P + +A E VN++
Sbjct: 105 --SGEESLKHVVEQAVSLFPGAGVDYLVHNAAFERPK-SKASDASEETLKTTFDVNVFGT 161
Query: 179 TEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATKRHVRGSF 228
+T V P M+++G G V I SA+ + +PS P IYSA+K + G F
Sbjct: 162 ISLTKLVAPHMLKQGGGHFVVISSAAGK-VPS-PGQAIYSASKHALHGYF 209
>AT1G63380.1 | chr1:23505582-23506504 FORWARD LENGTH=283
Length = 282
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVA 122
++TG +SG+GR + L+L + G +V R L + + + S + + V +L +
Sbjct: 23 LVTGASSGIGREICLDLCKAGCKIVAAARRVDRLNSLCSEINSFGAIGVQAVALELDV-- 80
Query: 123 TPHGDEPLRQLRETVEGL-DVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNL---WAV 178
+ D + ++E E + VL+NNAG+ + L ++ E W ++ R NL W +
Sbjct: 81 SSEADTIRKAVKEAWETFGKIDVLINNAGIRGNVKSSLDLSE-EEWDKVFRTNLTGSWLI 139
Query: 179 TEVTAAVLPGMVERGRGAVVNIGSAS 204
++ ++ ERG G+V+N+ S S
Sbjct: 140 SKYVCLLMRD-AERG-GSVINVSSIS 163
>AT1G49670.2 | chr1:18381591-18386021 REVERSE LENGTH=653
Length = 652
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
Query: 59 GAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLH-----GVETKT 113
G A++TG SG+GRA+ L LA +G+ + + +E ++ VR + G+ +
Sbjct: 6 GLSALVTGGASGIGRALCLALAEKGVFVTVADFSEEKGQETTSLVREANAKFHQGLSFPS 65
Query: 114 VVFDLSLVATPHGD--EPLRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEAD-VEAWVRM 170
+F + T GD + T LD + +NNAG+ P + D ++W
Sbjct: 66 AIF-VKCDVTNRGDLLAAFDKHLATFGTLD--ICINNAGISTPLRFDKDDTDGSKSWKHT 122
Query: 171 MRVNLWAVTEVTAAVLPGMVERGR-GAVVNIGSASSQAIPSFPLCTIYSATKRHV 224
+ V+L AV E T + M + + G ++N+GSA+ + P+ IY+A+K V
Sbjct: 123 INVDLIAVVEGTQLAIKAMKAKQKPGVIINMGSAA--GLYPMPVDPIYAASKAGV 175
>AT4G10020.1 | chr4:6268363-6270179 FORWARD LENGTH=390
Length = 389
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVA 122
VITG +S +G +A E A+RG NLVLV R L +SN + + + D+
Sbjct: 53 VITGASSAIGEQIAYEYAKRGANLVLVARREQRLRVVSNKAKQIGANHVIIIAADVI--- 109
Query: 123 TPHGDEPLRQLRETVEGLD-VGVLMNNAGVGEPAMAYLHE-ADVEAWVRMMRVNLWAVTE 180
D+ R + + V V L+N A +G Y E +D + ++ +N W
Sbjct: 110 --KEDDCRRFITQAVNYYGRVDHLVNTASLGH--TFYFEEVSDTTVFPHLLDINFWGNVY 165
Query: 181 VTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATK 221
T LP + + VVN AS + P ++YSA K
Sbjct: 166 PTYVALPYLHQTNGRIVVN---ASVENWLPLPRMSLYSAAK 203
>AT5G10050.1 | chr5:3144254-3145643 FORWARD LENGTH=280
Length = 279
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 63 VITGPTSG-MGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLV 121
+ITG + G +G A+A E +G +V R + + ++ +++ V +L +
Sbjct: 11 LITGCSQGGIGHALAREFTEKGCRVVATSRSRSTMTDLEQ--------DSRLFVKELDVQ 62
Query: 122 ATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEV 181
+ + + L ++ + +DV L+NNAGV + L E + A N++ +
Sbjct: 63 SDQNVSKVLSEVIDKFGKIDV--LVNNAGV--QCVGPLAETPISAMENTFNTNVFGSMRM 118
Query: 182 TAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATK 221
T AV+P MV + +G +VN+GS + A P P +Y+ATK
Sbjct: 119 TQAVVPHMVSKKKGKIVNVGSITVMA-PG-PWAGVYTATK 156
>AT1G62610.4 | chr1:23181531-23182454 REVERSE LENGTH=283
Length = 282
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVA 122
++TG +SG+GR + L+L + G +V R L + + + S + + +L +
Sbjct: 25 LVTGASSGIGREICLDLCKAGCKIVAAARRVDRLNSLCSEINSFGAIGVQAAALELDV-- 82
Query: 123 TPHGDEPLRQLRETVEGL-DVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNL---WAV 178
+ D + ++E E + VL+NNAG+ + L + E W ++ R NL W +
Sbjct: 83 SSDADTIRKAVKEAWEIFGTIDVLINNAGIRGNVKSSL-DLSKEEWDKVFRTNLTGSWLI 141
Query: 179 TEVTAAVLPGMVERGRGAVVNIGSAS 204
++ ++ +RG G+V+N+ S S
Sbjct: 142 SKYVCLLMRD-AKRG-GSVINVSSIS 165
>AT5G65205.1 | chr5:26050926-26052017 REVERSE LENGTH=286
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 63 VITGPTSG-MGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLV 121
+ITG + G +G A+A E + G +V R + E+ ++K V +L +
Sbjct: 12 LITGCSQGGIGHALAREFSANGCRVVATSRSQKTMTELEK--------DSKFFVQELDVQ 63
Query: 122 ATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEV 181
+ + + ++ + +DV L+NNAGV + L E + A N+ +
Sbjct: 64 SEQSVSKVVSKVIDKFGQIDV--LVNNAGV--QCIGPLAEIPISAMDYTFNTNVLGSMRM 119
Query: 182 TAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATK 221
T AV+P M + +G +VNIGS S A P P +Y+A+K
Sbjct: 120 TQAVVPHMASKKKGKIVNIGSISIMA-PG-PWAGVYTASK 157
>AT5G06060.1 | chr5:1824066-1825833 REVERSE LENGTH=265
Length = 264
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 22/208 (10%)
Query: 59 GAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDL 118
G A++TG T G+GRA+ ELA+ G + R+ L N ++ +G+ V D
Sbjct: 11 GKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKA-NGLVVSGSVCDA 69
Query: 119 SLVATPHGDEPLRQLRETVEGLDVGVLMNNAG--VGEPAMAYLHEADVEAWVRMMRVNLW 176
S+ E L Q + + +L+NN G V +P + Y E + ++M NL
Sbjct: 70 SV---RDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEY----SSEEYAKIMSTNLE 122
Query: 177 AVTEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATK-------RHVRGSFL 229
+ ++ P + G G++V I S + + +IY ATK R++ +
Sbjct: 123 SAFHLSQIAHPLLKASGVGSIVFISSVA--GLVHLSSGSIYGATKGALNQLTRNLACEWA 180
Query: 230 PE---PSPRAPFFVATRMVENLAEARRL 254
+ + AP+++ T +VE L E +
Sbjct: 181 SDNIRTNCVAPWYIKTSLVETLLEKKEF 208
>AT2G17845.1 | chr2:7758846-7759881 FORWARD LENGTH=313
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLH---GVETKTVVFDLS 119
++TG +SG+GR + L+LA+ G ++ R L+ + + + G++ + + D+S
Sbjct: 53 LVTGASSGIGREVCLDLAKAGCKIIAAARRVDRLKSLCSEINRFEYSAGIQAEALELDVS 112
Query: 120 LVATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNL---W 176
A + +++ E +D L+NNAG + L ++ E W ++ + NL W
Sbjct: 113 SDAATV-QKAVKKAWEIFGKID--ALINNAGFRGNVKSSLDLSEDE-WDKVFKTNLTGTW 168
Query: 177 AVTEVTAAVLPGMVERGRGAVVNIGSAS 204
V++ +L +RG G+V+NI S S
Sbjct: 169 LVSKY-VCILMRDAKRGGGSVINISSVS 195
>AT1G24360.1 | chr1:8640820-8643283 FORWARD LENGTH=320
Length = 319
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 28/203 (13%)
Query: 63 VITGPTSGMGRAMALELARRGLN-LVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLV 121
VITG + G+G+A+AL L + G LV R EE++ + G + + F +
Sbjct: 80 VITGASRGIGKAIALALGKAGCKVLVNYARSAKEAEEVAKQIEEYGG---QAITFGGDVS 136
Query: 122 ATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEV 181
D ++ + +D V++NNAG+ + L W ++ +NL V
Sbjct: 137 KATDVDAMMKTALDKWGTID--VVVNNAGITRDTL--LIRMKQSQWDEVIALNLTGVFLC 192
Query: 182 TAAVLPGMVERGRGAVVNIGS--------------ASSQAIPSFPLCTIYSATKRHVRGS 227
T A + M+++ RG ++NI S A+ + SF R++ +
Sbjct: 193 TQAAVKIMMKKKRGRIINISSVVGLIGNIGQANYAAAKGGVISFSKTAAREGASRNINVN 252
Query: 228 FLPEPSPRAPFFVATRMVENLAE 250
+ P F+A+ M L E
Sbjct: 253 VV------CPGFIASDMTAELGE 269
>AT1G10310.1 | chr1:3381733-3383874 REVERSE LENGTH=243
Length = 242
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 11/142 (7%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVA 122
+ITG + G+GRA+ALELA+RG ++ R L + + E + L L A
Sbjct: 21 LITGVSKGLGRALALELAKRGHTVIGCARSQEKLTALQS--------ELSSSTNHLLLTA 72
Query: 123 TPHGDEPLRQLRET-VEGLDV-GVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTE 180
+ + ++ T VE V +++NNAG + + E E + +M N+ V
Sbjct: 73 DVKSNSSVEEMAHTIVEKKGVPDIIVNNAGTINKN-SKIWEVSAEDFDNVMDTNVKGVAN 131
Query: 181 VTAAVLPGMVERGRGAVVNIGS 202
V +P M+ R +G +VN+ S
Sbjct: 132 VLRHFIPLMLPRKQGIIVNMSS 153
>AT3G26770.1 | chr3:9845494-9847079 FORWARD LENGTH=307
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 89/209 (42%), Gaps = 34/209 (16%)
Query: 59 GAWAVITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDL 118
G A+ITG SG+G+A A E R G +V+ D E + T + L G E + V D+
Sbjct: 43 GKVALITGGASGLGKATASEFLRHGARVVIADLDA---ETGTKTAKEL-GSEAEFVRCDV 98
Query: 119 SLVATPHGDEPLRQLRETVEGLDVGVLMNNAGVGEPAM-AYLHEADVEAWVRMMRVNLWA 177
++ A G + E LD V+ NNAG+ P A + + D+ + R+MR+N++
Sbjct: 99 TVEADIAG--AVEMTVERYGKLD--VMYNNAGIVGPMTPASISQLDMTEFERVMRINVF- 153
Query: 178 VTEVTAAVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATKRHVRGSFLPEPSPRAP 237
G V I A+ IP+ C + +++ V G P +
Sbjct: 154 -----------------GVVSGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISK 196
Query: 238 FFV-------ATRMVENLAEARRLSPFTV 259
F A+ + E+ +SP TV
Sbjct: 197 FTTPGIVKSAASELCEHGVRINCISPGTV 225
>AT5G04900.1 | chr5:1434826-1437194 FORWARD LENGTH=349
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 8/164 (4%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEEISNTVRSLHGVETKTVVFDLSLVA 122
+ITG T G+G A+A E + G N+V+ R +E +++ G D++
Sbjct: 83 LITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGEHVWGTKCDVT--- 139
Query: 123 TPHGDEPLRQLRETVEGLD-VGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVNLWAVTEV 181
G + + + + L + + +NNAG + L EA E + +++ N +
Sbjct: 140 --EGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDEDLIEVVKTNTLGLMLC 197
Query: 182 TAAVLPGMVERGRGA-VVNIGSASSQAIPSFPLCTIYSATKRHV 224
+ M+ + RG + NI A S P+ P Y ATKR V
Sbjct: 198 CREAMNMMLTQSRGGHIFNIDGAGSDGRPT-PRFAAYGATKRSV 240
>AT5G04070.1 | chr5:1102238-1104192 FORWARD LENGTH=360
Length = 359
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 63 VITGPTSGMGRAMALELARRGLNLVLVGRDPANLEE-ISNTVRSLHGVETKTVVFDL-SL 120
VITG TSG+G+A A L+R+G +VLVGR L + +S+ R + K D+ S
Sbjct: 62 VITGATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDAKLKAFEVDMSSF 121
Query: 121 VATPHGDEPLRQ-LRETVEGLDVGVLMNNAGVGEPAMAYLHEADVEAWVRMMRVN 174
L Q L E+ V +L+NNAG+ +A VE + RM+ N
Sbjct: 122 QLVLKFRSSLEQWLFESDLHSSVQLLVNNAGI----LATSSRPTVEGFDRMIATN 172
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,459,047
Number of extensions: 230377
Number of successful extensions: 738
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 760
Number of HSP's successfully gapped: 25
Length of query: 345
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 246
Effective length of database: 8,392,385
Effective search space: 2064526710
Effective search space used: 2064526710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)