BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0286700 Os06g0286700|Os06g0286700
         (953 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07040.1  | chr3:2226244-2229024 REVERSE LENGTH=927            289   6e-78
AT5G35450.1  | chr5:13667809-13670685 FORWARD LENGTH=902          246   3e-65
AT1G59780.1  | chr1:21993581-21997691 REVERSE LENGTH=907          228   1e-59
AT1G58390.1  | chr1:21690962-21693891 REVERSE LENGTH=908          227   3e-59
AT5G43470.1  | chr5:17463130-17466658 REVERSE LENGTH=909          225   1e-58
AT3G46730.1  | chr3:17213069-17215612 REVERSE LENGTH=848          223   5e-58
AT5G48620.1  | chr5:19717406-19720932 FORWARD LENGTH=909          222   6e-58
AT1G59218.1  | chr1:21828398-21831713 FORWARD LENGTH=1050         219   8e-57
AT1G58848.1  | chr1:21792140-21795455 FORWARD LENGTH=1050         219   8e-57
AT1G53350.1  | chr1:19903899-19907515 FORWARD LENGTH=928          217   2e-56
AT3G46530.1  | chr3:17130739-17133246 REVERSE LENGTH=836          206   5e-53
AT1G50180.1  | chr1:18584235-18587136 FORWARD LENGTH=858          206   6e-53
AT1G58807.1  | chr1:21780574-21783793 FORWARD LENGTH=1018         206   7e-53
AT1G59124.1  | chr1:21816832-21819653 FORWARD LENGTH=856          206   7e-53
AT1G58400.1  | chr1:21696165-21699118 REVERSE LENGTH=901          204   1e-52
AT1G59620.1  | chr1:21902627-21905527 FORWARD LENGTH=843          201   2e-51
AT3G50950.2  | chr3:18936127-18938685 FORWARD LENGTH=853          200   4e-51
AT1G58410.1  | chr1:21701286-21704255 REVERSE LENGTH=900          197   2e-50
AT1G10920.1  | chr1:3644587-3647004 REVERSE LENGTH=728            195   1e-49
AT1G58602.1  | chr1:21760167-21763765 FORWARD LENGTH=1139         186   5e-47
AT3G46710.1  | chr3:17206489-17209032 REVERSE LENGTH=848          183   3e-46
AT3G14470.1  | chr3:4857940-4861104 FORWARD LENGTH=1055           155   7e-38
AT3G14460.1  | chr3:4851990-4856264 REVERSE LENGTH=1425           145   8e-35
AT1G12280.1  | chr1:4174875-4177559 REVERSE LENGTH=895            128   2e-29
AT1G51480.1  | chr1:19090847-19094306 REVERSE LENGTH=942          125   1e-28
AT5G43730.1  | chr5:17560267-17562813 FORWARD LENGTH=849          122   1e-27
AT5G43740.1  | chr5:17566010-17568598 FORWARD LENGTH=863          118   1e-26
AT4G10780.1  | chr4:6634779-6637457 REVERSE LENGTH=893            117   3e-26
AT4G27190.1  | chr4:13620977-13623934 REVERSE LENGTH=986          115   8e-26
AT1G15890.1  | chr1:5461406-5463961 FORWARD LENGTH=852            115   2e-25
AT1G12220.1  | chr1:4145011-4147680 FORWARD LENGTH=890            111   2e-24
AT1G61180.2  | chr1:22551486-22554185 FORWARD LENGTH=900          110   3e-24
AT4G26090.1  | chr4:13224596-13227325 FORWARD LENGTH=910          110   3e-24
AT1G61310.1  | chr1:22613166-22615943 REVERSE LENGTH=926          108   1e-23
AT5G63020.1  | chr5:25283252-25286002 REVERSE LENGTH=889          108   1e-23
AT1G61190.1  | chr1:22557602-22560687 FORWARD LENGTH=968          108   1e-23
AT4G27220.1  | chr4:13633953-13636712 REVERSE LENGTH=920          108   2e-23
AT1G12210.1  | chr1:4140948-4143605 FORWARD LENGTH=886            107   2e-23
AT1G61300.1  | chr1:22607714-22610175 REVERSE LENGTH=763          107   4e-23
AT5G05400.1  | chr5:1597745-1600369 REVERSE LENGTH=875            105   1e-22
AT5G47250.1  | chr5:19186045-19188576 REVERSE LENGTH=844          105   2e-22
AT1G12290.1  | chr1:4178593-4181247 REVERSE LENGTH=885             96   9e-20
AT1G63350.1  | chr1:23494935-23497631 REVERSE LENGTH=899           91   4e-18
AT1G63360.1  | chr1:23499515-23502169 REVERSE LENGTH=885           90   5e-18
AT1G62630.1  | chr1:23185912-23188593 FORWARD LENGTH=894           88   2e-17
AT5G47260.1  | chr5:19189411-19192516 FORWARD LENGTH=949           86   1e-16
AT5G41750.1  | chr5:16694047-16697527 FORWARD LENGTH=1069          81   3e-15
AT1G63880.1  | chr1:23712514-23716047 REVERSE LENGTH=1018          75   1e-13
AT1G64070.1  | chr1:23779949-23783449 FORWARD LENGTH=998           74   5e-13
AT5G38850.1  | chr5:15555187-15558430 FORWARD LENGTH=987           73   7e-13
AT5G41740.2  | chr5:16688687-16692801 FORWARD LENGTH=1115          73   8e-13
AT5G04720.1  | chr5:1360748-1363665 FORWARD LENGTH=812             72   2e-12
AT1G63750.3  | chr1:23650940-23655333 FORWARD LENGTH=1132          72   2e-12
AT1G63870.1  | chr1:23707131-23711901 REVERSE LENGTH=1032          70   7e-12
AT4G33300.1  | chr4:16051162-16054005 REVERSE LENGTH=817           69   8e-12
AT1G56540.1  | chr1:21181664-21185306 FORWARD LENGTH=1097          68   2e-11
AT4G14370.1  | chr4:8279946-8283263 REVERSE LENGTH=1009            68   3e-11
AT5G58120.1  | chr5:23517492-23520927 FORWARD LENGTH=1047          66   8e-11
AT1G27170.1  | chr1:9434718-9439219 FORWARD LENGTH=1385            65   1e-10
AT1G56510.1  | chr1:21167704-21172260 FORWARD LENGTH=1008          65   2e-10
AT1G27180.1  | chr1:9439859-9445818 FORWARD LENGTH=1557            63   7e-10
AT5G45250.1  | chr5:18321914-18326022 REVERSE LENGTH=1218          62   1e-09
AT5G18350.1  | chr5:6074069-6078569 REVERSE LENGTH=1246            62   2e-09
AT1G63740.1  | chr1:23645525-23648807 FORWARD LENGTH=993           61   2e-09
AT5G41550.1  | chr5:16617232-16620785 REVERSE LENGTH=1086          61   3e-09
AT3G04220.1  | chr3:1109118-1112188 REVERSE LENGTH=868             60   5e-09
AT5G36930.2  | chr5:14567771-14571916 REVERSE LENGTH=1192          60   7e-09
AT2G16870.1  | chr2:7308077-7311686 REVERSE LENGTH=1110            59   1e-08
AT3G51570.1  | chr3:19126358-19130456 FORWARD LENGTH=1227          58   3e-08
AT1G33560.1  | chr1:12169092-12171878 FORWARD LENGTH=788           58   3e-08
AT3G15700.1  | chr3:5321136-5322376 REVERSE LENGTH=376             57   3e-08
AT1G66090.1  | chr1:24602221-24604573 FORWARD LENGTH=430           57   4e-08
AT3G44670.1  | chr3:16217242-16221425 FORWARD LENGTH=1220          57   4e-08
AT5G18370.1  | chr5:6085036-6088926 REVERSE LENGTH=1211            57   4e-08
AT3G04210.1  | chr3:1106243-1108005 REVERSE LENGTH=532             57   4e-08
AT4G11170.1  | chr4:6811127-6817130 FORWARD LENGTH=1096            57   5e-08
AT5G17680.1  | chr5:5822999-5827153 FORWARD LENGTH=1295            57   5e-08
AT1G69550.1  | chr1:26148836-26153374 REVERSE LENGTH=1401          57   6e-08
AT5G66910.1  | chr5:26718338-26721133 REVERSE LENGTH=816           56   1e-07
AT1G17600.1  | chr1:6053026-6056572 REVERSE LENGTH=1050            56   1e-07
AT5G11250.1  | chr5:3587978-3591960 REVERSE LENGTH=1190            56   1e-07
AT3G44400.1  | chr3:16046331-16049668 REVERSE LENGTH=1008          56   1e-07
AT4G09420.1  | chr4:5962319-5963776 REVERSE LENGTH=458             55   1e-07
AT3G44480.1  | chr3:16090878-16096041 REVERSE LENGTH=1195          55   2e-07
AT4G19510.1  | chr4:10633685-10637841 FORWARD LENGTH=1211          54   3e-07
AT1G63730.1  | chr1:23641770-23645132 FORWARD LENGTH=967           54   3e-07
AT5G40910.1  | chr5:16395507-16399129 FORWARD LENGTH=1105          54   3e-07
AT5G17970.1  | chr5:5948999-5951619 REVERSE LENGTH=781             54   4e-07
AT5G44510.1  | chr5:17929673-17934188 REVERSE LENGTH=1188          53   9e-07
AT4G19530.1  | chr4:10651962-10657090 FORWARD LENGTH=1168          53   1e-06
AT5G40090.1  | chr5:16042115-16043494 REVERSE LENGTH=460           53   1e-06
AT5G45440.1  | chr5:18412426-18413466 REVERSE LENGTH=347           52   1e-06
AT3G44630.3  | chr3:16196292-16200410 FORWARD LENGTH=1241          52   1e-06
AT1G52660.1  | chr1:19613475-19614796 FORWARD LENGTH=380           52   2e-06
AT4G16950.1  | chr4:9539010-9544340 REVERSE LENGTH=1450            51   3e-06
AT1G56520.2  | chr1:21174880-21178920 REVERSE LENGTH=1118          51   3e-06
AT4G12010.1  | chr4:7197325-7201393 REVERSE LENGTH=1220            51   3e-06
AT5G66900.1  | chr5:26714931-26717757 REVERSE LENGTH=810           51   3e-06
AT5G18360.1  | chr5:6080049-6083027 REVERSE LENGTH=901             50   4e-06
AT3G25510.1  | chr3:9260838-9268797 REVERSE LENGTH=1982            50   4e-06
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
          Length = 926

 Score =  289 bits (739), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 253/852 (29%), Positives = 419/852 (49%), Gaps = 95/852 (11%)

Query: 26  RHRIAIRIHNLKSRVEEVSSRNTRY--------NLVEPISSGTEDDMDSYAEDIRNQSAR 77
           RH IA ++  +   ++ +S    RY         L+ PI     DD D+   +  ++S+ 
Sbjct: 111 RHSIAQKLGMVNVMIQSISDSMKRYYHSENYQAALLPPI-----DDGDAKWVNNISESSL 165

Query: 78  NVDEAELVGFSDSKKRLLEMIDTNANDGPAK-VICVVGMGGLGKTALSRKIFESEEDIRK 136
              E  LVG    K +L+  +    +  P + V+ VVGMGG GKT LS  IF+S+  +R+
Sbjct: 166 FFSENSLVGIDAPKGKLIGRL---LSPEPQRIVVAVVGMGGSGKTTLSANIFKSQ-SVRR 221

Query: 137 NFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELK 196
           +F   AW+T+S+S+   ++ + MI++    +   Q+  EL     +    L E L+E L+
Sbjct: 222 HFESYAWVTISKSYVIEDVFRTMIKEFYKEAD-TQIPAELYS---LGYRELVEKLVEYLQ 277

Query: 197 EKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAE-KCATASLVYHLDF 255
            KRY VVLDD+W    W  I+ IA P +   GSR+++TTR++++A       S  + ++ 
Sbjct: 278 SKRYIVVLDDVWTTGLWREIS-IALP-DGIYGSRVMMTTRDMNVASFPYGIGSTKHEIEL 335

Query: 256 LQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQV-SE 314
           L+ ++A  L   K      +    +N++ +  ++V +C  LPLAI ++G++++TK+  SE
Sbjct: 336 LKEDEAWVLFSNKAFPASLEQCRTQNLEPIARKLVERCQGLPLAIASLGSMMSTKKFESE 395

Query: 315 WEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           W+K Y  L  EL  N  L+ +R ++ L +N LP  LK CFLY S+FP ++ +KR RL+  
Sbjct: 396 WKKVYSTLNWELNNNHELKIVRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRM 455

Query: 375 WIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSIS 434
           W+A+ FV P  G+  ++V +SY NEL+ R+M+Q       G+ K  ++HD+I +I +S+S
Sbjct: 456 WMAQRFVEPIRGVKAEEVADSYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVS 515

Query: 435 RQENF--VLLPMGDGSDLVQ--EN--TRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSL 488
           + E F  V     DG D  +  EN  +RH+     M+  + +  + + SL +       +
Sbjct: 516 KLERFCDVYNDDSDGDDAAETMENYGSRHLCIQKEMTPDS-IRATNLHSLLVCSSAKHKM 574

Query: 489 AHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQ 548
              + P  L +LR LDLED +     K  D +  + +LK             P++  KL 
Sbjct: 575 --ELLP-SLNLLRALDLEDSSI---SKLPDCLVTMFNLK-YLNLSKTQVKELPKNFHKLV 627

Query: 549 GLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLPKVFTP 608
            L+TLN   + I  LP  + KL+    LR +  F  +                       
Sbjct: 628 NLETLNTKHSKIEELPLGMWKLK---KLRYLITFRRNE---------------------- 662

Query: 609 LVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELG 668
                              S W+   G +V   I +L+DLQV+   D        IK LG
Sbjct: 663 ----------------GHDSNWNYVLGTRVVPKIWQLKDLQVM---DCFNAEDELIKNLG 703

Query: 669 QLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAVLFSGIIGTLECLDSISSXX 728
            +++L ++ +      +E  + L  ++ K+  ++ L + ++        LE  D I++  
Sbjct: 704 CMTQLTRISLVM--VRREHGRDLCDSLNKIKRIRFLSLTSI---DEEEPLEIDDLIATAS 758

Query: 729 XXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILGALPNLMVLYLYRNAY 788
                    G LE +P+W   L +L    LR S+L+E   +L +  LP L+ L  Y NAY
Sbjct: 759 IEKLFLA--GKLERVPSWFNTLQNLTYLGLRGSQLQEN-AILSIQTLPRLVWLSFY-NAY 814

Query: 789 LGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKCR-LESGIIGIIHL 847
           +G +L F  G F NL+ L I ++  L E+  EDG+   L+K+ +  CR LE    GI +L
Sbjct: 815 MGPRLRFAQG-FQNLKILEIVQMKHLTEVVIEDGAMFELQKLYVRACRGLEYVPRGIENL 873

Query: 848 PKLKEIPITYGS 859
             L+E+ + + S
Sbjct: 874 INLQELHLIHVS 885
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
          Length = 901

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 227/851 (26%), Positives = 392/851 (46%), Gaps = 109/851 (12%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTED-DMDSYAEDIRNQSARNVDEAE 83
           +RH++A  I  +  R+ +V        + + I  G     +     +IR Q+  N  E++
Sbjct: 104 DRHKVASDIEGITKRISKVIGEMQSLGIQQQIIDGGRSLSLQDIQREIR-QTFPNSSESD 162

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           LVG   S +   E++         +V+ + GMGG+GKT L+R+IF  +  +R++F   AW
Sbjct: 163 LVGVEQSVE---ELVGPMVEIDNIQVVSISGMGGIGKTTLARQIFHHDL-VRRHFDGFAW 218

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQ----ELQGKVVVQVHHLSEYLIEELKEKR 199
           + VSQ F +  + + ++++L       ++LQ     +QGK           L + L+  R
Sbjct: 219 VCVSQQFTQKHVWQRILQELRPHDG--EILQMDEYTIQGK-----------LFQLLETGR 265

Query: 200 YFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMN 259
           Y VVLDD+W   DW+ I E+ FP+  K+G ++++T+RN  +        L +    L   
Sbjct: 266 YLVVLDDVWKEEDWDRIKEV-FPR--KRGWKMLLTSRNEGVGLHADPTCLSFRARILNPK 322

Query: 260 DAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKF 318
           ++  L  R   + +E     + M+ + + +V  CG LPLA+  +G +LA K   SEW++ 
Sbjct: 323 ESWKLFERIVPRRNET--EYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKHTASEWKRV 380

Query: 319 YEHLPSELE-----INPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVG 373
            E++ +++       + SL ++ R+++L Y  LP+ LK CFLYL+ FPED++IK   L  
Sbjct: 381 SENIGAQIVGKSCLDDNSLNSVYRILSLSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYS 440

Query: 374 RWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSI 433
            W AEG      G+T  D GE Y  EL+ R+++   +  ++ ++K C++HD++R++ +S 
Sbjct: 441 YWAAEGIYD---GLTILDSGEDYLEELVRRNLVIAEKSNLSWRLKLCQMHDMMREVCISK 497

Query: 434 SRQENF---VLLPMGDGSDLVQ--ENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSL 488
           ++ ENF   + +P    + + Q    +R +  H   +         +RSL + G +    
Sbjct: 498 AKVENFLQIIKVPTSTSTIIAQSPSRSRRLTVHSGKAFHILGHKKKVRSLLVLGLKEDLW 557

Query: 489 AHAVCPDQ-LRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKL 547
             +    Q L +LRVLDL  V F                              P SIG L
Sbjct: 558 IQSASRFQSLPLLRVLDLSSVKF-------------------------EGGKLPSSIGGL 592

Query: 548 QGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLPKVFT 607
             L+ L++    ++ LPS I  L+ +  L      H       H    +   + L  +  
Sbjct: 593 IHLRFLSLHQAVVSHLPSTIRNLKLMLYL----NLHVAIGVPVHVPNVLKEMLELRYLSL 648

Query: 608 PLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRAIKEL 667
           PL           ++H  TK                +L DL  LEY+    T   ++ +L
Sbjct: 649 PL-----------DMHDKTKL---------------ELGDLVNLEYLWCFSTQHSSVTDL 682

Query: 668 GQLSKLRKLGVTTNGSTKEKCKI--LYAAIEKLSSLQSLHVDAVLFSGIIGTLECLDSIS 725
            +++KLR  GV    S  E+C    L +++ +   L++L   + ++S     ++ +    
Sbjct: 683 LRMTKLRFFGV----SFSERCTFENLSSSLRQFRKLETL---SFIYSRKTYMVDYVGEFV 735

Query: 726 SXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILGALPNLMVLYLYR 785
                         L ++P+  +   H+    L    ++E   M IL  L +L  + L R
Sbjct: 736 LDFIHLKKLSLGVHLSKIPDQHQLPPHIAHIYLLFCHMEE-DPMPILEKLLHLKSVELRR 794

Query: 786 NAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKC-RLESGIIGI 844
            A++G ++V   G FP LR L I E  +L E   E+GS P L  + I  C +LE    G+
Sbjct: 795 KAFIGRRMVCSKGGFPQLRALQISEQSELEEWIVEEGSMPCLRDLIIHSCEKLEELPDGL 854

Query: 845 IHLPKLKEIPI 855
            ++  LKE+ I
Sbjct: 855 KYVTSLKELKI 865
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
          Length = 906

 Score =  228 bits (581), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 235/864 (27%), Positives = 388/864 (44%), Gaps = 130/864 (15%)

Query: 26  RHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSARNV----DE 81
           R  IA++I ++  R+ +V       NL   I S   D +DS+A+  R +  R+      E
Sbjct: 102 RREIALQITSISKRISKVI--QVMQNL--GIKSDIMDGVDSHAQLERKRELRHTFSSESE 157

Query: 82  AELVGFSDSKKRLLE-MIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPC 140
           + LVG   + ++L+E ++  +++ G    + + G+GGLGKT L+R+IF+ ++ ++ +F  
Sbjct: 158 SNLVGLEKNVEKLVEELVGNDSSHG----VSITGLGGLGKTTLARQIFDHDK-VKSHFDG 212

Query: 141 NAWITVSQSFHRIELLKDMIRQLLG---PSSLDQLLQELQGKVVVQVHHLSEYLIEELKE 197
            AW+ VSQ F R    KD+ + +LG   P   D  L E           + + L + L+ 
Sbjct: 213 LAWVCVSQEFTR----KDVWKTILGNLSPKYKDSDLPE---------DDIQKKLFQLLET 259

Query: 198 KRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQ 257
           K+  +V DDLW   DW  I  + FP+  K G ++++T+RN  +   C T    +  + L 
Sbjct: 260 KKALIVFDDLWKREDWYRIAPM-FPER-KAGWKVLLTSRNDAIHPHCVT----FKPELLT 313

Query: 258 MNDAITLLLRKTNKNHEDMES---NKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VS 313
            ++   LL R      + +     +K M KM + +   C RLPLA+  +G +L  K  + 
Sbjct: 314 HDECWKLLQRIAFSKQKTITGYIIDKEMVKMAKEMTKHCKRLPLAVKLLGGLLDAKHTLR 373

Query: 314 EWEKFYEHLPSELEINPSLE------ALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIK 367
           +W+   E++ S + +  +        ++  +++L +  LP +LK C LYL+ +PED EI+
Sbjct: 374 QWKLISENIISHIVVGGTSSNENDSSSVNHVLSLSFEGLPGYLKHCLLYLASYPEDHEIE 433

Query: 368 RNRLVGRWIAEGFVRPK--VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDI 425
             RL   W AEG   P    G T +DV + Y  EL+ R+M+   R  +  + + C++HD+
Sbjct: 434 IERLSYVWAAEGITYPGNYEGATIRDVADLYIEELVKRNMVISERDALTSRFEKCQLHDL 493

Query: 426 IRDITVSISRQENFVLL------PMGDGSDLVQENTRHIAFHGSM-SCKTGLDWSIIRSL 478
           +R+I +  +++ENF+ +           S     + R + ++ S+ S +  +  S +RSL
Sbjct: 494 MREICLLKAKEENFLQIVTDPTSSSSVHSLASSRSRRLVVYNTSIFSGENDMKNSKLRSL 553

Query: 479 AIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXX 538
                     +      +L +LRVLDL+   F                            
Sbjct: 554 LFIPVGYSRFSMGSNFIELPLLRVLDLDGAKF-------------------------KGG 588

Query: 539 XXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITN 598
             P SIGKL  L+ L++    +  LPS         +LR +    Y N  +N        
Sbjct: 589 KLPSSIGKLIHLKYLSLYQASVTYLPS---------SLRNLKSLLYLNLRINS-----GQ 634

Query: 599 TICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRR 658
            I +P VF          K++ EL   +   W  S   K+  G     +L  LE +    
Sbjct: 635 LINVPNVF----------KEMLELRYLSLP-WERSSLTKLELG-----NLLKLETLINFS 678

Query: 659 TSSRAIKELGQLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAVLFSGIIGTL 718
           T   ++ +L +++KLR L +  +G            +E LSS  S+          +G L
Sbjct: 679 TKDSSVTDLHRMTKLRTLQILISGEG--------LHMETLSSALSM----------LGHL 720

Query: 719 ECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILGALPNL 778
           E L    S                +P+     +HL    L    L+E   M  L  L  L
Sbjct: 721 EDLTVTPSENSVQFKHPKLIYRPMLPDVQHFPSHLTTISLVYCFLEE-DPMPTLEKLLQL 779

Query: 779 MVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKC-RL 837
            V+ L+ NAY+G ++V   G FP L  L I+ LD L E   E+GS PLL  + I  C +L
Sbjct: 780 KVVSLWYNAYVGRRMVCTGGGFPPLHRLEIWGLDALEEWIVEEGSMPLLHTLHIVDCKKL 839

Query: 838 ESGIIGIIHLPKLKEIPITYGSKV 861
           +    G+  +  LKE+ I    KV
Sbjct: 840 KEIPDGLRFISSLKELAIRTNEKV 863
>AT1G58390.1 | chr1:21690962-21693891 REVERSE LENGTH=908
          Length = 907

 Score =  227 bits (578), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 223/853 (26%), Positives = 396/853 (46%), Gaps = 118/853 (13%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSARNVDEAEL 84
           +R R A+ +  +++R+ +V      + + + I  G         +    Q+     E++ 
Sbjct: 104 DRRRNALDVGGIRTRISDVIRDMQSFGVQQAIVDGGYMQPQGDRQREMRQTFSKDYESDF 163

Query: 85  VGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWI 144
           VG   + K+L+  +    N    +V+ + GMGGLGKT L+R++F + ED++  F   AW+
Sbjct: 164 VGLEVNVKKLVGYLVDEEN---VQVVSITGMGGLGKTTLARQVF-NHEDVKHQFDRLAWV 219

Query: 145 TVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVL 204
            VSQ F R  + + +++ L      D++LQ       ++   L + L + L+  +  +V 
Sbjct: 220 CVSQEFTRKNVWQMILQNLTSREKKDEILQ-------MEEAELHDKLFQLLETSKSLIVF 272

Query: 205 DDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITL 264
           DD+W   DW+ I  I FP N  KG ++++T++N  +A +     L +  + L + D+ TL
Sbjct: 273 DDIWKDEDWDLIKPI-FPPN--KGWKVLLTSQNESVAVRGDIKYLNFKPECLAIEDSWTL 329

Query: 265 LLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATK-QVSEWEKFYEH 321
             R     K+  + + ++ M+ M ++++  CG LPLAI  +G +LA K  + +WE+   +
Sbjct: 330 FQRIAFPKKDASESKVDEEMEDMGKQMLKHCGGLPLAIKVLGGLLAAKYTMHDWERLSVN 389

Query: 322 LPSEL--EINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEG 379
           + S++    + +  ++  ++++ +  LPS+LK CFLYL+ FPED +I   +L   W AEG
Sbjct: 390 IGSDIVGRTSSNNSSIYHVLSMSFEELPSYLKHCFLYLAHFPEDHKINVEKLSYCWAAEG 449

Query: 380 FVRPK---VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQ 436
               +    G T +DVG+SY  EL+ R+MI   R   A +  TC +HD++R++ +  +++
Sbjct: 450 ISTAEDYHNGETIQDVGQSYLEELVRRNMIIWERDATASRFGTCHLHDMMREVCLFKAKE 509

Query: 437 ENFVLLPM--------GDGSDLVQENTRHIAFH--GSMSCKTGLDWSIIRSLAIFG---- 482
           ENF+ + +          G+      +R + +    ++  +  ++   +RSL +      
Sbjct: 510 ENFLQIAVKSVGVTSSSTGNSQSPCRSRRLVYQCPTTLHVERDINNPKLRSLVVLWHDLW 569

Query: 483 -DRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXP 541
            +  K L  +    +L++LRVLDL  V       DF+ + L                  P
Sbjct: 570 VENWKLLGTSFT--RLKLLRVLDLFYV-------DFEGMKL------------------P 602

Query: 542 RSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTIC 601
             IG L  L+ L++    ++ LPS +  L  L          Y N  ++      T  I 
Sbjct: 603 FGIGNLIHLRYLSLQDAKVSHLPSSLGNLMLL---------IYLNLDVD------TEFIF 647

Query: 602 LPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSS 661
           +P VF  +   + R  ++  LHM  K+  S             LR+L  LE +    T  
Sbjct: 648 VPDVFMRM--HELRYLKLP-LHMHKKTRLS-------------LRNLVKLETLVYFSTWH 691

Query: 662 RAIKELGQLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAVLFSGIIGTLECL 721
            + K+L  +++L  L +     T    + L A+I  L +L+ L++       +      L
Sbjct: 692 SSSKDLCGMTRLMTLAIRLTRVT--STETLSASISGLRNLEYLYIVGTHSKKMREEGIVL 749

Query: 722 DSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILGALPNLMVL 781
           D I            +  +    ++  +LT +K   L    L+E   M IL  L +L  +
Sbjct: 750 DFIH-----LKHLLLDLYMPRQQHFPSRLTFVK---LSECGLEE-DPMPILEKLLHLKGV 800

Query: 782 YLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKCRLESGI 841
            L + +Y G ++V   G FP L+ L I  L++  E   E+GS PLLE + I  C      
Sbjct: 801 ILLKGSYCGRRMVCSGGGFPQLKKLEIVGLNKWEEWLVEEGSMPLLETLSILDCE----- 855

Query: 842 IGIIHLPKLKEIP 854
                  +LKEIP
Sbjct: 856 -------ELKEIP 861
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
          Length = 908

 Score =  225 bits (573), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 228/863 (26%), Positives = 398/863 (46%), Gaps = 124/863 (14%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTE---DDMDSYAEDIRNQSARNVDE 81
           +RH++A  I  +  R+ EV      + + + I  G      +      +IR Q+  +  E
Sbjct: 104 DRHKVASDIEGITKRISEVIGEMQSFGIQQIIDGGRSLSLQERQRVQREIR-QTYPDSSE 162

Query: 82  AELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCN 141
           ++LVG   S K   E++     +   +V+ + GMGG+GKT L+R++F  +  +R++F   
Sbjct: 163 SDLVGVEQSVK---ELVGHLVENDVHQVVSIAGMGGIGKTTLARQVFHHDL-VRRHFDGF 218

Query: 142 AWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQ---GKVV-VQVHHLSEYLIEELKE 197
           AW+ VSQ F +  + +             ++LQELQ   G ++ +  + L   L + L+ 
Sbjct: 219 AWVCVSQQFTQKHVWQ-------------RILQELQPHDGDILQMDEYALQRKLFQLLEA 265

Query: 198 KRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQ 257
            RY VVLDD+W   DW+ I  + FP+  K+G ++++T+RN  +        L +    L 
Sbjct: 266 GRYLVVLDDVWKKEDWDVIKAV-FPR--KRGWKMLLTSRNEGVGIHADPTCLTFRASILN 322

Query: 258 MNDAITLLLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSE 314
             ++  L  R     ++  ++  ++ M+ M + +V  CG LPLA+  +G +LA K  V E
Sbjct: 323 PEESWKLCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPE 382

Query: 315 WEKFYEHLPSELE-----INPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRN 369
           W++ ++++ S++       + SL ++ R+++L Y  LP+HLK CFL L+ FPED EI   
Sbjct: 383 WKRVFDNIGSQIVGGSWLDDNSLNSVYRILSLSYEDLPTHLKHCFLNLAHFPEDSEISTY 442

Query: 370 RLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDI 429
            L   W AEG      G T +D GE Y  EL+ R+++      ++ + K C++HD++R++
Sbjct: 443 SLFYYWAAEGIYD---GSTIEDSGEYYLEELVRRNLVIADDNYLSWQSKYCQMHDMMREV 499

Query: 430 TVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSI--------IRSLAI- 480
            +S +++ENF+ + + D +     N +  +    +S  +G  + I        +RSL + 
Sbjct: 500 CLSKAKEENFLQIII-DPTCTSTINAQSPSRSRRLSIHSGKAFHILGHKNKTKVRSLIVP 558

Query: 481 -----FGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXX 535
                +  R  S+ H      L +LRVLDL  V F                         
Sbjct: 559 RFEEDYWIRSASVFH-----NLTLLRVLDLSWVKF------------------------- 588

Query: 536 XXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKC 595
                P SIG L  L+ L++    ++ LPS +  L+ L  L        D     H    
Sbjct: 589 EGGKLPCSIGGLIHLRYLSLYEAKVSHLPSTMRNLKLLLYL----NLRVDTEEPIHVPNV 644

Query: 596 ITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVD 655
           +   I L  +  PL   DD+ K                          +L DL  LEY+ 
Sbjct: 645 LKEMIQLRYLSLPL-KMDDKTKL-------------------------ELGDLVNLEYLY 678

Query: 656 IRRTSSRAIKELGQLSKLRKLGVTTNGSTKEKCKI--LYAAIEKLSSLQSLHVDAVLFSG 713
              T   ++ +L +++KLR L V    S  E+C    L +++ +L +L++L+    L + 
Sbjct: 679 GFSTQHSSVTDLLRMTKLRYLAV----SLSERCNFETLSSSLRELRNLETLNFLFSLETY 734

Query: 714 IIGTLECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILG 773
           ++  +   + +               + ++P+  +   HL    L    ++E   M IL 
Sbjct: 735 MVDYMG--EFVLDHFIHLKQLGLAVRMSKIPDQHQFPPHLVHLFLIYCGMEE-DPMPILE 791

Query: 774 ALPNLMVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIG 833
            L +L  + L R A+LG ++V   G FP L  + I +  +L E   E+GS P L  + I 
Sbjct: 792 KLLHLKSVRLARKAFLGSRMVCSKGGFPQLCVIEISKESELEEWIVEEGSMPCLRTLTID 851

Query: 834 KC-RLESGIIGIIHLPKLKEIPI 855
            C +L+    G+ ++  LKE+ I
Sbjct: 852 DCKKLKELPDGLKYITSLKELKI 874
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
          Length = 847

 Score =  223 bits (567), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 176/572 (30%), Positives = 290/572 (50%), Gaps = 53/572 (9%)

Query: 24  RERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSARN----- 78
           R+ + I   I  LK R+ +++ +   +     I S  E       E+I N   R      
Sbjct: 103 RDAYNIVEDIRTLKRRILDITRKRETFG----IGSFNE----PRGENITNVRVRQLRRAP 154

Query: 79  -VDEAELV-GFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRK 136
            VD+ ELV G  D  K LL  + ++     + +I + GMGGLGKTAL+RK++ S  D+++
Sbjct: 155 PVDQEELVVGLEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSG-DVKR 213

Query: 137 NFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELK 196
            F C AW  VSQ +   ++L  +IR L G  S +++ +    K+  +   L  YL   L+
Sbjct: 214 RFDCRAWTYVSQEYKTRDILIRIIRSL-GIVSAEEMEK---IKMFEEDEELEVYLYGLLE 269

Query: 197 EKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFL 256
            K Y VV+DD+W    W  +   A P +++ GS+++ITTR   +AE        + L FL
Sbjct: 270 GKNYMVVVDDVWDPDAWESLKR-ALPCDHR-GSKVIITTRIRAIAEGVEGTVYAHKLRFL 327

Query: 257 QMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWE 316
              ++ TL  RK   N E +  ++++Q+  + +V KCG LPLAI+ +  +L+ K+ +EW 
Sbjct: 328 TFEESWTLFERKAFSNIEKV--DEDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKRTNEWH 385

Query: 317 KFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWI 376
           +    L   L+ N     +  +  L +  +   LK CFLY S+FPED+EIK  +L+   +
Sbjct: 386 EVCASLWRRLKDNSI--HISTVFDLSFKEMRHELKLCFLYFSVFPEDYEIKVEKLIHLLV 443

Query: 377 AEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQ 436
           AEGF++    M  +DV   Y +EL++RS+++  R+   GK+ +CRIHD++RD+ +  +++
Sbjct: 444 AEGFIQEDEEMMMEDVARCYIDELVDRSLVKAERIE-RGKVMSCRIHDLLRDLAIKKAKE 502

Query: 437 ENFVLL--PMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCP 494
            NFV +       SD+ +    H   +    C   ++   +RS    G+R          
Sbjct: 503 LNFVNVYNEKQHSSDICRREVVHHLMNDYYLCDRRVN-KRMRSFLFIGERRGFGYVNTTN 561

Query: 495 DQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLN 554
            +L++LRVL++E + F+   K+  +                     P  IG+L  L+ L 
Sbjct: 562 LKLKLLRVLNMEGLLFV--SKNISN-------------------TLPDVIGELIHLRYLG 600

Query: 555 MPSTYIAALPSEISKLQCLHTLRCIGQ--FHY 584
           +  TY++ LP+ IS L+ L TL   G   F Y
Sbjct: 601 IADTYVSILPASISNLRFLQTLDASGNDPFQY 632
>AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909
          Length = 908

 Score =  222 bits (566), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 230/865 (26%), Positives = 403/865 (46%), Gaps = 128/865 (14%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRY---NLVEPISSGTEDDMDSYAEDIRNQSARNVDE 81
           +RH++A  I  +  R+ +V      +    +++ + S +  +      +IR Q+  +  E
Sbjct: 104 DRHKVASDIEGITKRISDVIGEMQSFGIQQIIDGVRSLSLQERQRVQREIR-QTYPDSSE 162

Query: 82  AELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCN 141
           ++LVG   S +   E++     +   +V+ + GMGG+GKT L+R++F  +  +R++F   
Sbjct: 163 SDLVGVEQSVE---ELVGHLVENDIYQVVSIAGMGGIGKTTLARQVFHHDL-VRRHFDGF 218

Query: 142 AWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVV-VQVHHLSEYLIEELKEKRY 200
           AW+ VSQ F     LK + +++L      Q LQ   G ++ +    L   L + L+  RY
Sbjct: 219 AWVCVSQQF----TLKHVWQRIL------QELQPHDGNILQMDESALQPKLFQLLETGRY 268

Query: 201 FVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMND 260
            +VLDD+W   DW+ I  + FP+  K+G ++++T+RN  +        L +    L   +
Sbjct: 269 LLVLDDVWKKEDWDRIKAV-FPR--KRGWKMLLTSRNEGVGIHADPTCLTFRASILNPEE 325

Query: 261 AITLLLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEK 317
           +  L  R     ++  ++  ++ M+ M + +V  CG LPLA+  +G +LA K  V EW++
Sbjct: 326 SWKLCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKHTVPEWKR 385

Query: 318 FYEHLPSE------LEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRL 371
             +++ S+      L+ N SL ++ R+++L Y  LP+HLK  FLYL+ FPED +I    L
Sbjct: 386 VSDNIGSQIVGGSCLDDN-SLNSVNRILSLSYEDLPTHLKHRFLYLAHFPEDSKIYTQDL 444

Query: 372 VGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITV 431
              W AEG      G T +D GE Y  EL+ R+++      ++ +   C++HD++R++ +
Sbjct: 445 FNYWAAEGIYD---GSTIQDSGEYYLEELVRRNLVIADNRYLSLEFNFCQMHDMMREVCL 501

Query: 432 SISRQENFVLL---PMGDGSDLVQENTRHIAFHGSMSCKTGLDWSI--------IRSLAI 480
           S +++ENF+ +   P    +   Q  +R   F    S  +G  + I        +RSL +
Sbjct: 502 SKAKEENFLQIIKDPTSTSTINAQSPSRSRRF----SIHSGKAFHILGHRNNPKVRSLIV 557

Query: 481 ------FGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXX 534
                 F  R  S+ H      L +LRVLDL  V F                        
Sbjct: 558 SRFEEDFWIRSASVFH-----NLTLLRVLDLSRVKF------------------------ 588

Query: 535 XXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMK 594
                 P SIG L  L+ L++    ++ LPS         T+R +    + N  +++   
Sbjct: 589 -EGGKLPSSIGGLIHLRYLSLYGAVVSHLPS---------TMRNLKLLLFLNLRVDN--- 635

Query: 595 CITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYV 654
                I +P V           K++ EL   +     +    K    +G L +L+ L Y 
Sbjct: 636 --KEPIHVPNVL----------KEMLELRYLS---LPQEMDDKTKLELGDLVNLEYLWYF 680

Query: 655 DIRRTSSRAIKELGQLSKLRKLGVTTNGSTKEKCKI--LYAAIEKLSSLQSLHVDAVLFS 712
             + +S   + +L +++KLR LGV    S  E+C    L +++ +L +L+ L+   VLFS
Sbjct: 681 STQHSS---VTDLLRMTKLRNLGV----SLSERCNFETLSSSLRELRNLEMLN---VLFS 730

Query: 713 GIIGTLECL-DSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLI 771
             I  ++ + + +               + ++P+  +   HL    L    +KE   M I
Sbjct: 731 PEIVMVDHMGEFVLDHFIHLKQLGLAVRMSKIPDQHQFPPHLAHIHLVHCVMKE-DPMPI 789

Query: 772 LGALPNLMVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIE 831
           L  L +L  + L   A++G ++V   G FP L  L I    +L E   E+GS P L  + 
Sbjct: 790 LEKLLHLKSVALSYGAFIGRRVVCSKGGFPQLCALGISGESELEEWIVEEGSMPCLRTLT 849

Query: 832 IGKC-RLESGIIGIIHLPKLKEIPI 855
           I  C +L+    G+ ++  LKE+ I
Sbjct: 850 IHDCEKLKELPDGLKYITSLKELKI 874
>AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050
          Length = 1049

 Score =  219 bits (557), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 215/864 (24%), Positives = 395/864 (45%), Gaps = 134/864 (15%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPI-SSGTEDDMDSYAEDIRNQSARNVDEAE 83
           +R R A+ I  L +R+ +V      + + + I   G +        ++R + +++ D+++
Sbjct: 104 DRRRYALGIGGLSNRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKD-DDSD 162

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
            VG   + K+L+  +   AN    +V+ + GMGGLGKT L++++F + ED++  F   +W
Sbjct: 163 FVGLEANVKKLVGYLVDEAN---VQVVSITGMGGLGKTTLAKQVF-NHEDVKHQFDGLSW 218

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ F R+ + + ++R L  P   ++ + E+          L   LI  L+  +  +V
Sbjct: 219 VCVSQDFTRMNVWQKILRDL-KPKEEEKKIMEMTQDT------LQGELIRLLETSKSLIV 271

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+W   DW  I  I FP    KG ++++T+RN  +A +  T+ + +  + L   D+ T
Sbjct: 272 LDDIWEKEDWELIKPI-FPPT--KGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDSWT 328

Query: 264 LLLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS-EWEKFYE 320
           L  R     K+  + + ++  +++ + ++  CG LPLAI  +G +LA K  S +W +  E
Sbjct: 329 LFQRIALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHDWRRLSE 388

Query: 321 HLPSEL------EINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           ++ S L        + +      +++L +  LPS+LK CFLYL+ FP+D+EI    L   
Sbjct: 389 NIGSHLVGGRTNFNDDNNNTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYY 448

Query: 375 WIAEGFVRPK--VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVS 432
           W AEG  +P+   G   +DVG+ Y  EL+ R+M+   R     + +TC +HD++R++ + 
Sbjct: 449 WAAEGIFQPRHYDGEIIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLL 508

Query: 433 ISRQENFVLLP---MGDGSDLVQENTRHIAFHGSMSCKTGLDWS--IIRSLAI------F 481
            +++ENF+ +       G+ L    +R + +   ++     D +   +RSL +      F
Sbjct: 509 KAKEENFLQITSSRTSTGNSLSIVTSRRLVYQYPITLDVEKDINDPKLRSLVVVANTYMF 568

Query: 482 GDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXP 541
                 +       +L +LRVLD+             H A L   K              
Sbjct: 569 WGGWSWMLLGSSFIRLELLRVLDI-------------HRAKLKGGKLAS----------- 604

Query: 542 RSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTIC 601
            SIG+L  L+ LN+    +  +P  +  L+ L  L  +                ++ +  
Sbjct: 605 -SIGQLIHLRYLNLKHAEVTHIPYSLGNLKLLIYLNLV--------------ILVSGSTL 649

Query: 602 LPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGK-----LRDLQVLEYVDI 656
           +P V           K++ +L             + +PK +G+     L +L  LE +  
Sbjct: 650 VPNVL----------KEMQQLRY-----------LALPKDMGRKTKLELSNLVKLETLKN 688

Query: 657 RRTSSRAIKELGQLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAV------L 710
             T + ++++L  + +LR L +     T    + L A+I  L  L+SL +  +       
Sbjct: 689 FSTKNCSLEDLRGMVRLRTLTIELRKET--SLETLAASIGGLKYLESLTITDLGSEMRTK 746

Query: 711 FSGIIGTLECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTML 770
            +GI+     L +++               +  P      +HL    L+  +L+E   M 
Sbjct: 747 EAGIVFDFVYLKTLTLKLYMPRLSKE----QHFP------SHLTTLYLQHCRLEE-DPMP 795

Query: 771 ILGALPNLMVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKI 830
           IL  L  L  L L R ++ G+++V  +G FP L+ L I  L++  + + E+ S P+L  +
Sbjct: 796 ILEKLHQLKELELRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDWKVEESSMPVLHTL 855

Query: 831 EIGKCRLESGIIGIIHLPKLKEIP 854
           +I  CR            KLK++P
Sbjct: 856 DIRDCR------------KLKQLP 867
>AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050
          Length = 1049

 Score =  219 bits (557), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 215/864 (24%), Positives = 395/864 (45%), Gaps = 134/864 (15%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPI-SSGTEDDMDSYAEDIRNQSARNVDEAE 83
           +R R A+ I  L +R+ +V      + + + I   G +        ++R + +++ D+++
Sbjct: 104 DRRRYALGIGGLSNRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKD-DDSD 162

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
            VG   + K+L+  +   AN    +V+ + GMGGLGKT L++++F + ED++  F   +W
Sbjct: 163 FVGLEANVKKLVGYLVDEAN---VQVVSITGMGGLGKTTLAKQVF-NHEDVKHQFDGLSW 218

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ F R+ + + ++R L  P   ++ + E+          L   LI  L+  +  +V
Sbjct: 219 VCVSQDFTRMNVWQKILRDL-KPKEEEKKIMEMTQDT------LQGELIRLLETSKSLIV 271

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+W   DW  I  I FP    KG ++++T+RN  +A +  T+ + +  + L   D+ T
Sbjct: 272 LDDIWEKEDWELIKPI-FPPT--KGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDSWT 328

Query: 264 LLLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS-EWEKFYE 320
           L  R     K+  + + ++  +++ + ++  CG LPLAI  +G +LA K  S +W +  E
Sbjct: 329 LFQRIALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHDWRRLSE 388

Query: 321 HLPSEL------EINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           ++ S L        + +      +++L +  LPS+LK CFLYL+ FP+D+EI    L   
Sbjct: 389 NIGSHLVGGRTNFNDDNNNTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYY 448

Query: 375 WIAEGFVRPK--VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVS 432
           W AEG  +P+   G   +DVG+ Y  EL+ R+M+   R     + +TC +HD++R++ + 
Sbjct: 449 WAAEGIFQPRHYDGEIIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLL 508

Query: 433 ISRQENFVLLP---MGDGSDLVQENTRHIAFHGSMSCKTGLDWS--IIRSLAI------F 481
            +++ENF+ +       G+ L    +R + +   ++     D +   +RSL +      F
Sbjct: 509 KAKEENFLQITSSRTSTGNSLSIVTSRRLVYQYPITLDVEKDINDPKLRSLVVVANTYMF 568

Query: 482 GDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXP 541
                 +       +L +LRVLD+             H A L   K              
Sbjct: 569 WGGWSWMLLGSSFIRLELLRVLDI-------------HRAKLKGGKLAS----------- 604

Query: 542 RSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTIC 601
            SIG+L  L+ LN+    +  +P  +  L+ L  L  +                ++ +  
Sbjct: 605 -SIGQLIHLRYLNLKHAEVTHIPYSLGNLKLLIYLNLV--------------ILVSGSTL 649

Query: 602 LPKVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGK-----LRDLQVLEYVDI 656
           +P V           K++ +L             + +PK +G+     L +L  LE +  
Sbjct: 650 VPNVL----------KEMQQLRY-----------LALPKDMGRKTKLELSNLVKLETLKN 688

Query: 657 RRTSSRAIKELGQLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAV------L 710
             T + ++++L  + +LR L +     T    + L A+I  L  L+SL +  +       
Sbjct: 689 FSTKNCSLEDLRGMVRLRTLTIELRKET--SLETLAASIGGLKYLESLTITDLGSEMRTK 746

Query: 711 FSGIIGTLECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTML 770
            +GI+     L +++               +  P      +HL    L+  +L+E   M 
Sbjct: 747 EAGIVFDFVYLKTLTLKLYMPRLSKE----QHFP------SHLTTLYLQHCRLEE-DPMP 795

Query: 771 ILGALPNLMVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKI 830
           IL  L  L  L L R ++ G+++V  +G FP L+ L I  L++  + + E+ S P+L  +
Sbjct: 796 ILEKLHQLKELELRRKSFSGKEMVCSSGGFPQLQKLSIKGLEEWEDWKVEESSMPVLHTL 855

Query: 831 EIGKCRLESGIIGIIHLPKLKEIP 854
           +I  CR            KLK++P
Sbjct: 856 DIRDCR------------KLKQLP 867
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
          Length = 927

 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 225/854 (26%), Positives = 377/854 (44%), Gaps = 108/854 (12%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTED-DMDSYAEDIRNQSARNVDEAE 83
           +R + A  I  +  R+ EV        +      G     +     +IR   +RN  E++
Sbjct: 104 DRRKFASDIEGITKRISEVIVGMQSLGIQHIADGGGRSLSLQERQREIRQTFSRN-SESD 162

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           LVG   S +   E++D    +   +V+ V GMGG+GKT L+R++F   + +R++F   +W
Sbjct: 163 LVGLDQSVE---ELVDHLVENDSVQVVSVSGMGGIGKTTLARQVFH-HDIVRRHFDGFSW 218

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ F R ++ + ++ Q L P          +G + +  + L   L E L+  RY +V
Sbjct: 219 VCVSQQFTRKDVWQRIL-QDLRPYD--------EGIIQMDEYTLQGELFELLESGRYLLV 269

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+W   DW+ I  + FP  +K+G ++++T+RN  L          +    L    +  
Sbjct: 270 LDDVWKEEDWDRIKAV-FP--HKRGWKMLLTSRNEGLGLHADPTCFAFRPRILTPEQSWK 326

Query: 264 LLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHL 322
           L  R  +   +  E   + + M + +V  CG LPLA+  +G +LA K  V EW++ + ++
Sbjct: 327 LFERIVSSRRDKTEFKVD-EAMGKEMVTYCGGLPLAVKVLGGLLAKKHTVLEWKRVHSNI 385

Query: 323 PSELEINPSLE-----ALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIA 377
            + +     L      ++ R+++L Y  LP  LK CF YL+ FPED++I    L   W+A
Sbjct: 386 VTHIVGKSGLSDDNSNSVYRVLSLSYEDLPMQLKHCFFYLAHFPEDYKIDVKILFNYWVA 445

Query: 378 EGFVRP-KVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQ 436
           EG + P   G T +D GESY  EL+ R+M+      +  +I+ C++HD++R++ +S +++
Sbjct: 446 EGIITPFHDGSTIQDTGESYLEELVRRNMVVVEESYLTSRIEYCQMHDMMREVCLSKAKE 505

Query: 437 ENF---VLLPMGDGSDLVQEN---TRHIAFHG--SMSCKTGLDWSIIRSLAIFGD----- 483
           ENF   V +P    + +  ++   +R +  H   ++      D    RS+ IFG      
Sbjct: 506 ENFIRVVKVPTTTSTTINAQSPCRSRRLVLHSGNALHMLGHKDNKKARSVLIFGVEEKFW 565

Query: 484 RPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRS 543
           +P+      C   L +LRVLDL  V F                              P S
Sbjct: 566 KPRGFQ---C---LPLLRVLDLSYVQF-------------------------EGGKLPSS 594

Query: 544 IGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLP 603
           IG L  L+ L++    ++ LPS +  L+                 L      + + +   
Sbjct: 595 IGDLIHLRFLSLYEAGVSHLPSSLGNLK----------------LLLCLNLGVADRL--- 635

Query: 604 KVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRA 663
                LV   +  K++ EL          S   K    +G L +L+ L     +  S   
Sbjct: 636 -----LVHVPNVLKEMQELRYLR---LPRSMPAKTKLELGDLVNLESLTNFSTKHGS--- 684

Query: 664 IKELGQLSKLRKLGVTTNGS-TKEKCKILYAAIEKLSSLQSLHVDAVLFSGIIGTLECLD 722
           + +L +++KL  L V  +G  T E   +    +  L +L       V  +   G L  LD
Sbjct: 685 VTDLLRMTKLSVLNVIFSGECTFETLLLSLRELRNLETLSFHDFQKVSVANHGGELLVLD 744

Query: 723 SISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILGALPNLMVLY 782
            I            +  L   P+      HL    L   +++E   M IL  L +L  +Y
Sbjct: 745 FIH-----LKDLTLSMHLPRFPDQYRFPPHLAHIWLIGCRMEE-DPMPILEKLLHLKSVY 798

Query: 783 LYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKC-RLESGI 841
           L   A+LG ++V   G FP L  L +    +L E R E+GS P L  + I  C +L+   
Sbjct: 799 LSSGAFLGRRMVCSKGGFPQLLALKMSYKKELVEWRVEEGSMPCLRTLTIDNCKKLKQLP 858

Query: 842 IGIIHLPKLKEIPI 855
            G+ ++  LKE+ I
Sbjct: 859 DGLKYVTCLKELKI 872
>AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836
          Length = 835

 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 175/571 (30%), Positives = 270/571 (47%), Gaps = 61/571 (10%)

Query: 33  IHNLKSRVEEVSSRNTRYN---LVEPISSGTEDDMDSYAEDIRN-QSARNVDEAELV-GF 87
           I  LK R+ +++ +   Y    L EP   G    +      +R  + AR+VD+ E+V G 
Sbjct: 112 IRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLR-----VRQLRRARSVDQEEVVVGL 166

Query: 88  SDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVS 147
            D  K LLE +  +  +    +I + GMGGLGKTAL+RK++ S  D+++ F   AW  VS
Sbjct: 167 EDDAKILLEKL-LDYEEKNRFIISIFGMGGLGKTALARKLYNSR-DVKERFEYRAWTYVS 224

Query: 148 QSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDL 207
           Q +   ++L  +IR L   S      +EL+         L  YL   L+ K+Y VV+DD+
Sbjct: 225 QEYKTGDILMRIIRSLGMTSG-----EELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDI 279

Query: 208 WILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLR 267
           W    W+ +   A P N++ GSR++ITTR   +AE        + L FL   ++  L  +
Sbjct: 280 WEREAWDSLKR-ALPCNHE-GSRVIITTRIKAVAEGVDGRFYAHKLRFLTFEESWELFEQ 337

Query: 268 KTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELE 327
           +  +N +    ++++ K  + +V KC  LPL I+ +  +L+ K  SEW      L   L+
Sbjct: 338 RAFRNIQ--RKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRKTPSEWNDVCNSLWRRLK 395

Query: 328 INPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGM 387
            + S+     +  L +  L    K CFLYLSIFPED+EI   +L+   +AEGF++    M
Sbjct: 396 -DDSIHVAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEM 454

Query: 388 TTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENFVLLPMGDG 447
             +DV   Y  ELI+RS+++  R    GK+ +CRIHD++RD+ +  S++ NF        
Sbjct: 455 MMEDVARYYIEELIDRSLLEAVRRE-RGKVMSCRIHDLLRDVAIKKSKELNF-------- 505

Query: 448 SDLVQENTRHIAFHGSMSCKTGL-------------DWSIIRSLAIFGDRPKSLAHAVCP 494
              V     H+A H S +C+  +                 +RS   FG+      H V  
Sbjct: 506 ---VNVYNDHVAQHSSTTCRREVVHHQFKRYSSEKRKNKRMRSFLYFGE----FDHLVGL 558

Query: 495 D--QLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRS-IGKLQGLQ 551
           D   L++LRVLD   +        F     L HL+               + I KL+ LQ
Sbjct: 559 DFETLKLLRVLDFGSLWL-----PFKINGDLIHLRYLGIDGNSINDFDIAAIISKLRFLQ 613

Query: 552 TLNMPSTYIAALPSEISKLQCLHTLRCIGQF 582
           TL +   Y      ++ KL  L     IG F
Sbjct: 614 TLFVSDNYFIEETIDLRKLTSLR--HVIGNF 642
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
          Length = 857

 Score =  206 bits (523), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 173/597 (28%), Positives = 287/597 (48%), Gaps = 87/597 (14%)

Query: 30  AIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMD----SYAEDIRNQ--SARNVDEAE 83
           A+ +H++ S + E++SR ++      +  G ++ M     S ++ +R Q  S   V E  
Sbjct: 105 AVSLHSVGSEIREITSRLSKIA-ASMLDFGIKESMGREGLSLSDSLREQRQSFPYVVEHN 163

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           LVG   S ++L+   D  +     +V  + GMGGLGKT L+++IF   + +R++F   AW
Sbjct: 164 LVGLEQSLEKLVN--DLVSGGEKLRVTSICGMGGLGKTTLAKQIFHHHK-VRRHFDRFAW 220

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ   R  + +D+   L           E Q  + ++   L E L   LK  +  +V
Sbjct: 221 VYVSQDCRRRHVWQDIFLNL-------SYKDENQRILSLRDEQLGEELHRFLKRNKCLIV 273

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+W    W+ +  + FP  ++ GS I++TTRN ++A       +++    L   ++  
Sbjct: 274 LDDIWGKDAWDCLKHV-FP--HETGSEIILTTRNKEVALYADPRGVLHEPQLLTCEESWE 330

Query: 264 LLLRKTNKNHEDMESN--KNMQKMVERIVNKCGRLPLAILTIGAVLATKQV-SEWEKFYE 320
           LL + +    E++E    K M+++ ++IV +CG LPLAI  +G +LATK   +EW++  E
Sbjct: 331 LLEKISLSGRENIEPMLVKKMEEIGKQIVVRCGGLPLAITVLGGLLATKSTWNEWQRVCE 390

Query: 321 HLPSELEINPSLEALRRMVT-----LGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRW 375
           ++ S +    S    + M+      L Y +LP H+K CFLY + +PED+E+    LV   
Sbjct: 391 NIKSYVSNGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYC 450

Query: 376 IAEGFVRP----KVGMTTKDVGESYFNELINRSMIQRSRVGI-AGKIKTCRIHDIIRDIT 430
           IAEG V P    + G T +DVG+ Y  EL+ RSM+   R  I   ++ TCR+HD++R++ 
Sbjct: 451 IAEGMVMPVKHTEAGTTVEDVGQDYLEELVKRSMVMVGRRDIVTSEVMTCRMHDLMREVC 510

Query: 431 VSISRQENFVLLPMGDGSD-------LVQENTRHIA--FHGSMSCKTGLDWSIIRSLAIF 481
           +  ++QE+FV +      D       L    +R I+   HG      G +   I+SL+  
Sbjct: 511 LQKAKQESFVQVIDSRDQDEAEAFISLSTNTSRRISVQLHG------GAEEHHIKSLSQV 564

Query: 482 GDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXP 541
             R           ++++LRVLDLE                                  P
Sbjct: 565 SFR-----------KMKLLRVLDLEGAQI-------------------------EGGKLP 588

Query: 542 RSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCI--GQFHYDNFSLNHPM-KC 595
             +G L  L+ L++  T +  L S I  L+ + TL     GQ +  N   + P+ KC
Sbjct: 589 DDVGDLIHLRNLSVRLTNVKELTSSIGNLKLMITLDLFVKGQLYIPNQLWDFPVGKC 645
>AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018
          Length = 1017

 Score =  206 bits (523), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 301/603 (49%), Gaps = 56/603 (9%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPI-SSGTEDDMDSYAEDIRNQSARNVDEAE 83
           +R R A+ I  L +R+ +V      + + + I   G +        ++R + +++ D+++
Sbjct: 104 DRRRYALGIGGLSNRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKD-DDSD 162

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
            VG   + K+L+  +   AN    +V+ + GMGGLGKT L++++F + ED++  F   +W
Sbjct: 163 FVGLEANVKKLVGYLVDEAN---VQVVSITGMGGLGKTTLAKQVF-NHEDVKHQFDGLSW 218

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ F R+ + + ++R L  P   ++ + E+          L   LI  L+  +  +V
Sbjct: 219 VCVSQDFTRMNVWQKILRDL-KPKEEEKKIMEMTQDT------LQGELIRLLETSKSLIV 271

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+W   DW  I  I FP    KG ++++T+RN  +A +  T+ + +  + L   D+ T
Sbjct: 272 LDDIWEKEDWELIKPI-FPPT--KGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDSWT 328

Query: 264 LLLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS-EWEKFYE 320
           L  R     K+  + + ++  +++ + ++  CG LPLAI  +G +LA K  S +W +  E
Sbjct: 329 LFQRIALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHDWRRLSE 388

Query: 321 HLPSEL------EINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           ++ S L        + +      +++L +  LPS+LK CFLYL+ FPED+EIK   L   
Sbjct: 389 NIGSHLVGGRTNFNDDNNNTCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYY 448

Query: 375 WIAEGFVRPK--VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVS 432
           W AEG  +P+   G T +DVG+ Y  EL+ R+M+   R     + +TC +HD++R++ + 
Sbjct: 449 WAAEGIFQPRHYDGETIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLL 508

Query: 433 ISRQENFVLLPMGDGSDLVQENT---RHIAFH--GSMSCKTGLDWSIIRSLAIFGDRPKS 487
            +++ENF+ +     S    ++T   R   +    ++  +  ++   +R+L +      +
Sbjct: 509 KAKEENFLQITSSRPSTANLQSTVTSRRFVYQYPTTLHVEKDINNPKLRALVVVTLGSWN 568

Query: 488 LAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKL 547
           LA +    +L +LRVLDL +V  +   K    I  L HL+             P S+G L
Sbjct: 569 LAGSSFT-RLELLRVLDLIEVK-IKGGKLASCIGKLIHLR-YLSLEYAEVTHIPYSLGNL 625

Query: 548 QGLQTLNMP----STYIA------------ALPSEISK-----LQCLHTLRCIGQFHYDN 586
           + L  LN+     ST++             ALPS++ +     L  L  L  +  F  +N
Sbjct: 626 KLLIYLNLASFGRSTFVPNVLMGMQELRYLALPSDMGRKTKLELSNLVKLETLENFSTEN 685

Query: 587 FSL 589
            SL
Sbjct: 686 SSL 688
>AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856
          Length = 855

 Score =  206 bits (523), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 168/603 (27%), Positives = 301/603 (49%), Gaps = 56/603 (9%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPI-SSGTEDDMDSYAEDIRNQSARNVDEAE 83
           +R R A+ I  L +R+ +V      + + + I   G +        ++R + +++ D+++
Sbjct: 104 DRRRYALGIGGLSNRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKD-DDSD 162

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
            VG   + K+L+  +   AN    +V+ + GMGGLGKT L++++F + ED++  F   +W
Sbjct: 163 FVGLEANVKKLVGYLVDEAN---VQVVSITGMGGLGKTTLAKQVF-NHEDVKHQFDGLSW 218

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ F R+ + + ++R L  P   ++ + E+          L   LI  L+  +  +V
Sbjct: 219 VCVSQDFTRMNVWQKILRDL-KPKEEEKKIMEMTQDT------LQGELIRLLETSKSLIV 271

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+W   DW  I  I FP    KG ++++T+RN  +A +  T+ + +  + L   D+ T
Sbjct: 272 LDDIWEKEDWELIKPI-FPPT--KGWKVLLTSRNESVAMRRNTSYINFKPECLTTEDSWT 328

Query: 264 LLLRKT--NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS-EWEKFYE 320
           L  R     K+  + + ++  +++ + ++  CG LPLAI  +G +LA K  S +W +  E
Sbjct: 329 LFQRIALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHDWRRLSE 388

Query: 321 HLPSEL------EINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           ++ S L        + +      +++L +  LPS+LK CFLYL+ FPED+EIK   L   
Sbjct: 389 NIGSHLVGGRTNFNDDNNNTCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYY 448

Query: 375 WIAEGFVRPK--VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVS 432
           W AEG  +P+   G T +DVG+ Y  EL+ R+M+   R     + +TC +HD++R++ + 
Sbjct: 449 WAAEGIFQPRHYDGETIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLL 508

Query: 433 ISRQENFVLLPMGDGSDLVQENT---RHIAFH--GSMSCKTGLDWSIIRSLAIFGDRPKS 487
            +++ENF+ +     S    ++T   R   +    ++  +  ++   +R+L +      +
Sbjct: 509 KAKEENFLQITSSRPSTANLQSTVTSRRFVYQYPTTLHVEKDINNPKLRALVVVTLGSWN 568

Query: 488 LAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKL 547
           LA +    +L +LRVLDL +V  +   K    I  L HL+             P S+G L
Sbjct: 569 LAGSSFT-RLELLRVLDLIEVK-IKGGKLASCIGKLIHLR-YLSLEYAEVTHIPYSLGNL 625

Query: 548 QGLQTLNMP----STYIA------------ALPSEISK-----LQCLHTLRCIGQFHYDN 586
           + L  LN+     ST++             ALPS++ +     L  L  L  +  F  +N
Sbjct: 626 KLLIYLNLASFGRSTFVPNVLMGMQELRYLALPSDMGRKTKLELSNLVKLETLENFSTEN 685

Query: 587 FSL 589
            SL
Sbjct: 686 SSL 688
>AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901
          Length = 900

 Score =  204 bits (520), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 217/856 (25%), Positives = 375/856 (43%), Gaps = 132/856 (15%)

Query: 26  RHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDD--MDSYAEDIRNQSARNVDEAE 83
           R   A  I  +  R+ +V      + + + IS G++    +     ++R   +R   E++
Sbjct: 105 RWEFASDIGGISKRISKVIQDMHSFGVQQMISDGSQSSHLLQEREREMRQTFSRGY-ESD 163

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
            VG   + K+L+  +     +   +++ V GMGGLGKT L+R++F + ED++  F   AW
Sbjct: 164 FVGLEVNVKKLVGYL---VEEDDIQIVSVTGMGGLGKTTLARQVF-NHEDVKHQFDRLAW 219

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           + VSQ F R  + + +++ L    + D++LQ       ++   L + L + L+  +  +V
Sbjct: 220 VCVSQEFTRKNVWQMILQNLTSRETKDEILQ-------MEEAELHDELFQLLETSKSLIV 272

Query: 204 LDDLWILHDWNWINEIAFPKNNK---KGSRIVITTRNVDLAEKCATASLVYHLDFLQMND 260
            DD+W   DW  IN I  PK       G+R     R V+   +C T      L+   +  
Sbjct: 273 FDDIWKEEDWGLINPIFPPKKETIAMHGNR-----RYVNFKPECLTI-----LESWILFQ 322

Query: 261 AITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQV-SEWEKFY 319
            I +       +  + + +K M+ M ++++  CG LPLA+  +G +LA K    +W++  
Sbjct: 323 RIAM----PRVDESEFKVDKEMEMMGKQMIKYCGGLPLAVKVLGGLLAAKYTFHDWKRLS 378

Query: 320 EHLPSELEINPSLE-----ALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           E++   +            ++  +++L +  LPS+LK CFLYL+ FPED  IK  +L   
Sbjct: 379 ENIGCHIVGRTDFSDGNNSSVYHVLSLSFEELPSYLKHCFLYLAHFPEDHNIKVEKLSYC 438

Query: 375 WIAEGFVRPK--VGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVS 432
           W AEG + P+   G T +DVGESY  EL+ R+M+   R     + + C +HD++R++ + 
Sbjct: 439 WAAEGILEPRHYHGQTIRDVGESYIEELVRRNMVIAERDVTTLRFEACHLHDMMREVCLL 498

Query: 433 ISRQENFV----LLPMGDGSDLVQENTRHIAFH-GSMSCKTGLDWSIIRSLAI-FGDRPK 486
            +++ENFV    +LP    S     + R ++ +  ++     ++   ++SL I + +R K
Sbjct: 499 KAKEENFVQIASILPPTANSQYPGTSRRFVSQNPTTLHVSRDINNPKLQSLLIVWENRRK 558

Query: 487 S---LAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRS 543
           S   L  +    +L +LRVLDL    F                              P  
Sbjct: 559 SWKLLGSSFI--RLELLRVLDLYKAKF-------------------------EGRNLPSG 591

Query: 544 IGKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLP 603
           IGKL  L+ LN+    ++ LPS +  L+ L  L                       +C  
Sbjct: 592 IGKLIHLRYLNLDLARVSRLPSSLGNLRLLIYLDI--------------------NVCTK 631

Query: 604 KVFTPLVSRDDRAKQIAELHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRA 663
            +F P         +   L   T          ++  G+  L +L+ LE      T + +
Sbjct: 632 SLFVPNCLMGMHELRYLRLPFNTSK--------EIKLGLCNLVNLETLENFS---TENSS 680

Query: 664 IKELGQLSKLRKLGVTTNGSTKEKCK-ILYAAIEKLSSLQSLHV----DAVLFSGIIGTL 718
           +++L  +  LR L   T G  K   K  L+A+I  +  L++L +     +  F  I+   
Sbjct: 681 LEDLRGMVSLRTL---TIGLFKHISKETLFASILGMRHLENLSIRTPDGSSKFKRIMEDG 737

Query: 719 ECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRRSKLKEGKTMLILGALPNL 778
             LD+I               + ++P+     +HL    L    L E   + IL  L  L
Sbjct: 738 IVLDAIHLKQLNLRLY-----MPKLPDEQHFPSHLTSISLDGCCLVE-DPLPILEKLLEL 791

Query: 779 MVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKCRLE 838
             + L   A+ G+++V   G FP L  L I+ L +  E   E+GS P L  + I  C+  
Sbjct: 792 KEVRLDFRAFCGKRMVSSDGGFPQLHRLYIWGLAEWEEWIVEEGSMPRLHTLTIWNCQ-- 849

Query: 839 SGIIGIIHLPKLKEIP 854
                     KLK++P
Sbjct: 850 ----------KLKQLP 855
>AT1G59620.1 | chr1:21902627-21905527 FORWARD LENGTH=843
          Length = 842

 Score =  201 bits (510), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 190/762 (24%), Positives = 335/762 (43%), Gaps = 127/762 (16%)

Query: 107 AKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGP 166
           ++V+ + GMGG+GKT L+R++F + E ++ +F   AW+ VSQ F R  + + ++R++ GP
Sbjct: 150 SQVVSITGMGGIGKTTLARQVF-NHETVKSHFAQLAWVCVSQQFTRKYVWQTILRKV-GP 207

Query: 167 SSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK 226
             +         K+ +    L E L   L  ++  +VLDD+W   DW+ I  I FP    
Sbjct: 208 EYI---------KLEMTEDELQEKLFRLLGTRKALIVLDDIWREEDWDMIEPI-FPLG-- 255

Query: 227 KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKT--NKNHEDMESNKNMQK 284
           KG ++++T+RN  +A +      ++  D L   ++ T+  R     +N  + + ++ M++
Sbjct: 256 KGWKVLLTSRNEGVALRANPNGFIFKPDCLTPEESWTIFRRIVFPGENTTEYKVDEKMEE 315

Query: 285 MVERIVNKCGRLPLAILTIGAVLATK-QVSEWEKFYEHLPSELEINPS-----LEALRRM 338
           + ++++  CG LPLA+  +G +L     + EW++ Y ++ S +    S     + ++  +
Sbjct: 316 LGKQMIKHCGGLPLALKVLGGLLVVHFTLDEWKRIYGNIKSHIVGGTSFNDKNMSSVYHI 375

Query: 339 VTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKV--GMTTKDVGESY 396
           + L +  LP +LK CFLYL+ FPEDF I   +L   W AEG  RP+   G T + VG+ Y
Sbjct: 376 LHLSFEELPIYLKHCFLYLAQFPEDFTIDLEKLSYYWAAEGMPRPRYYDGATIRKVGDGY 435

Query: 397 FNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTR 456
             EL+ R+M+   R     + +TC +HDI+R++ +  + +EN +     + S    +  R
Sbjct: 436 IEELVKRNMVISERDARTRRFETCHLHDIVREVCLLKAEEENLI---ETENSKSPSKPRR 492

Query: 457 HIAFHGSMSCKTG-LDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQK 515
            +   G  +   G L    +RSL    +        V   +L+++RVLDL  V F     
Sbjct: 493 LVVKGGDKTDMEGKLKNPKLRSLLFIEELGGYRGFEVWFTRLQLMRVLDLHGVEF----- 547

Query: 516 DFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHT 575
                                    P SIG L  L+ L++     + LPS +  L+ L  
Sbjct: 548 ---------------------GGELPSSIGLLIHLRYLSLYRAKASHLPSSMQNLKMLLY 586

Query: 576 LRCIGQFHYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQIAELHMATKSCWSESFG 635
           L                                                    C  ES  
Sbjct: 587 LNL--------------------------------------------------CVQESCY 596

Query: 636 VKVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGQL---SKLRKLGVTTNGSTKEKCKILY 692
           + +P  + ++ +L+ L      R   +++ E G L   ++LR L +   G  +   K L 
Sbjct: 597 IYIPNFLKEMLELKYLSLP--LRMDDKSMGEWGDLQFMTRLRALSIYIRG--RLNMKTLS 652

Query: 693 AAIEKLSSLQSLHVDAVLFSGIIGTLECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTH 752
           +++ KL  L++L    + +  +   +  ++ +               +  +P+      H
Sbjct: 653 SSLSKLRDLENL---TICYYPMYAPMSGIEGLVLDCDQLKHLNLRIYMPRLPDEQHFPWH 709

Query: 753 LKKFDLRRSKLKEGKTMLILGALPNLMVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELD 812
           L+   L    LKE   M IL  L  L  + L   ++ G+++V   G FP L+ L +  L+
Sbjct: 710 LRNISLAECCLKE-DPMPILEKLLQLNEVSLSHQSFCGKRMVCSDGGFPQLQKLDLCGLE 768

Query: 813 QLREIRFEDGSSPLLEKIEIGKCRLESGIIGIIHLPKLKEIP 854
           +  E   E+GS P L K+ I             + PKLKE+P
Sbjct: 769 EWEEWIVEEGSMPRLHKLTIR------------NDPKLKELP 798
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
          Length = 852

 Score =  200 bits (508), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 186/698 (26%), Positives = 319/698 (45%), Gaps = 100/698 (14%)

Query: 26  RHRIAIRIHNLKSRVEEVSSRNTRY-NLVEPISSGTEDDMDSYAEDIRNQSARNVDEAEL 84
           +++ + R+  +  R+ ++ S+   Y   + P + G ++  D ++  +        D  ++
Sbjct: 108 QYKKSKRLQEINERITKIKSQVEPYFEFITPSNVGRDNGTDRWSSPV-------YDHTQV 160

Query: 85  VGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWI 144
           VG    K+++ E +   +ND    ++  VGMGGLGKT +++++F  +E I   F    W+
Sbjct: 161 VGLEGDKRKIKEWL-FRSNDSQLLIMAFVGMGGLGKTTIAQEVFNDKE-IEHRFERRIWV 218

Query: 145 TVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVL 204
           +VSQ+F   ++++ ++R L G +S+   +  L  K+        +YL+     KRY +V+
Sbjct: 219 SVSQTFTEEQIMRSILRNL-GDASVGDDIGTLLRKI-------QQYLLG----KRYLIVM 266

Query: 205 DDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKC-ATASLVYHLDFLQMNDAIT 263
           DD+W   + +W ++I       +G  +++TTR+  +A++  A     +  + L  +++  
Sbjct: 267 DDVWD-KNLSWWDKIYQGLPRGQGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWL 325

Query: 264 LLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ--VSEWEKFYEH 321
           L        ++       ++ + + IV KC  LPL I  +G +L  K     EW +  EH
Sbjct: 326 LFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEH 385

Query: 322 LPSELEINPS-LEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGF 380
              EL  N S  + +   + L Y+ LPSHLK C L LS++PED  I + +LV  WI EGF
Sbjct: 386 FQDELRGNTSETDNVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGF 445

Query: 381 VRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENFV 440
           V  + G +  + GE  F+ L NR +I+      +G I TC+IHD++RD+ + I+++++F 
Sbjct: 446 VMWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSF- 504

Query: 441 LLPMGDGSDLVQENTRHIAFHGSMS---CKTGLDWSIIRSLAIFGDRPK---SLAHAVCP 494
                  S+    N RH+   G+      K       + S    G+  K    LA     
Sbjct: 505 -------SNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFT- 556

Query: 495 DQLRMLRVLDLEDVTFLITQKD-FDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTL 553
              + LRVLD+    F     +  D IA L HL              PRS+  L  LQ L
Sbjct: 557 -DCKYLRVLDISKSIFDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQIL 615

Query: 554 NMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLPKVFTPLVSRD 613
           +      A+    + +LQ      CI  F                               
Sbjct: 616 D------ASYCQNLKQLQ-----PCIVLF------------------------------- 633

Query: 614 DRAKQIAELHMATKSCWS-ESFGVKVPKGIGKLRDLQV-LEYVDIRRTSSRAIKELGQLS 671
              K++  L M   +C S E F    PKGIG L  L+V L +   R  +   + E+  L+
Sbjct: 634 ---KKLLVLDMT--NCGSLECF----PKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLT 684

Query: 672 KLRKLGVT-TNGSTKEKCKILYAAIEKLSSLQSLHVDA 708
            LRKLG++ T G   E+ ++   ++  LS L S+ ++ 
Sbjct: 685 NLRKLGLSLTRGDQIEEEEL--DSLINLSKLMSISINC 720
>AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900
          Length = 899

 Score =  197 bits (501), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 202/808 (25%), Positives = 369/808 (45%), Gaps = 109/808 (13%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDD--MDSYAEDIRNQSARNVDEA 82
           +R  +A  I  +  R+ +V      + + + I+ G+     +     ++R+  +R+  E 
Sbjct: 102 DRRELASDIGGISKRISKVIQDMQSFGVQQIITDGSRSSHPLQERQREMRHTFSRD-SEN 160

Query: 83  ELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNA 142
           + VG   + K+L+  +         +++ + GMGGLGKT L+R++F + + ++  F   A
Sbjct: 161 DFVGMEANVKKLVGYL---VEKDDYQIVSLTGMGGLGKTTLARQVF-NHDVVKDRFDGFA 216

Query: 143 WITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFV 202
           W++VSQ F RI + + +++ L      D    E+Q      +H   + L   L+  +  +
Sbjct: 217 WVSVSQEFTRISVWQTILQNLTSKERKD----EIQNMKEADLH---DDLFRLLESSKTLI 269

Query: 203 VLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAI 262
           VLDD+W   DW+ I  I  PK   KG ++++T+R   +A +  T  + +    L + D+ 
Sbjct: 270 VLDDIWKEEDWDLIKPIFPPK---KGWKVLLTSRTESIAMRGDTTYISFKPKCLSIPDSW 326

Query: 263 TLL--LRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATK-QVSEWEKFY 319
           TL   +    K+  + + ++ M+ M ++++  CG L LA+  +G +LA K  + +W++  
Sbjct: 327 TLFQSIAMPRKDTSEFKVDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLHDWKRLS 386

Query: 320 EHLPSEL--EINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIA 377
           E++ S +    + +  ++  ++++ +  LP++LK CFLYL+ FPED EI   +L   W A
Sbjct: 387 ENIGSHIVERTSGNNSSIDHVLSVSFEELPNYLKHCFLYLAHFPEDHEIDVEKLHYYWAA 446

Query: 378 EGFV--RPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISR 435
           EG    R   G T +D G+SY  EL+ R+M+   R  +  + +TCR+HD++R+I +  ++
Sbjct: 447 EGISERRRYDGETIRDTGDSYIEELVRRNMVISERDVMTSRFETCRLHDMMREICLFKAK 506

Query: 436 QENFVLL-----PMGDGSDLVQENTRHIAFHG--SMSCKTGLDWSIIRSLAI----FGDR 484
           +ENF+ +     P  +   L    +R    H   ++  +   +   +RSL +     G+R
Sbjct: 507 EENFLQIVSNHSPTSNPQTL--GASRRFVLHNPTTLHVERYKNNPKLRSLVVVYDDIGNR 564

Query: 485 PKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSI 544
              L+ ++   ++++LRVLDL    F                              P  I
Sbjct: 565 RWMLSGSIFT-RVKLLRVLDLVQAKF-------------------------KGGKLPSDI 598

Query: 545 GKLQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLPK 604
           GKL  L+ L++    ++ LPS +  L  L  L     F                 I +P 
Sbjct: 599 GKLIHLRYLSLKDAKVSHLPSSLRNLVLLIYLDIRTDF---------------TDIFVPN 643

Query: 605 VFTPLVSRDDRAKQIAE-LHMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIRRTSSRA 663
           VF  +  R+ R  ++   +H  TK                +L +L+ LE ++   T S +
Sbjct: 644 VFMGM--RELRYLELPRFMHEKTKL---------------ELSNLEKLEALENFSTKSSS 686

Query: 664 IKELGQLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAVLFSGIIGTLECLDS 723
           +++L  + +LR L +  +  T    + L A++  L  L++  +        +G    +  
Sbjct: 687 LEDLRGMVRLRTLVIILSEGT--SLQTLSASVCGLRHLENFKIMENAGVNRMGEERMVLD 744

Query: 724 ISSXXXXXXXXXXNGSLEEMPNW--IEQL-THLKKFDLRRSKLKEGKTMLILGALPNLMV 780
            +                EMP    I+ L +HL   DL    L+E   M IL  L  L  
Sbjct: 745 FTYLKKLTLSI-------EMPRLPKIQHLPSHLTVLDLSYCCLEED-PMPILEKLLELKD 796

Query: 781 LYLYRNAYLGEKLVFKTGAFPNLRTLCI 808
           L L   ++ G K+V   G FP LR L +
Sbjct: 797 LSLDYLSFSGRKMVCSAGGFPQLRKLAL 824
>AT1G10920.1 | chr1:3644587-3647004 REVERSE LENGTH=728
          Length = 727

 Score =  195 bits (495), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/542 (29%), Positives = 268/542 (49%), Gaps = 76/542 (14%)

Query: 52  LVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVIC 111
           +++  SS +  +     ++IR Q+  N  E++LVG   S + L   +  N N    +V+ 
Sbjct: 9   IIDGASSMSLQERQREQKEIR-QTFANSSESDLVGVEQSVEALAGHLVENDN---IQVVS 64

Query: 112 VVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGP----- 166
           + GMGG+GKT L+R++F  +  ++++F   AW+ VSQ F +  + +  I Q L P     
Sbjct: 65  ISGMGGIGKTTLARQVFHHDM-VQRHFDGFAWVFVSQQFTQKHVWQR-IWQELQPQNGDI 122

Query: 167 SSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK 226
           S +D+ +  LQGK           L + L+  RY VVLDD+W   DW+ I  + FP+  K
Sbjct: 123 SHMDEHI--LQGK-----------LFKLLETGRYLVVLDDVWKEEDWDRIKAV-FPR--K 166

Query: 227 KGSRIVITTRNVDLAEKCATASLVYHLDFL------QMNDAITLLLRKTNKNHEDMESNK 280
           +G ++++T+RN  +       S  +    L      ++ + I    R       ++  ++
Sbjct: 167 RGWKMLLTSRNEGVGIHADPKSFGFKTRILTPEESWKLCEKIVFHRRDETGTLSEVRVDE 226

Query: 281 NMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYE----HLPSELEINPSLEAL 335
           +M+ M + +V  CG LPLA+  +G +LATK  V EW++ Y+    HL     ++ +L ++
Sbjct: 227 DMEAMGKEMVTCCGGLPLAVKVLGGLLATKHTVPEWKRVYDNIGPHLAGRSSLDDNLNSI 286

Query: 336 RRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPK-VGMTTKDVGE 394
            R+++L Y +LP  LK CFLYL+ FPE +EI   RL     AEG +     G T +D GE
Sbjct: 287 YRVLSLSYENLPMCLKHCFLYLAHFPEYYEIHVKRLFNYLAAEGIITSSDDGTTIQDKGE 346

Query: 395 SYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENFV-LLPMGDGSDLVQ- 452
            Y  EL  R+MI   +  +  + K C++HD++R++ +S +++ENF+ +  +   +  +  
Sbjct: 347 DYLEELARRNMITIDKNYMFLRKKHCQMHDMMREVCLSKAKEENFLEIFKVSTATSAINA 406

Query: 453 ---ENTRHIAFHGSMSCKTGLDWSI---IRSLAIFGDRPKSL---AHAVCPDQLRMLRVL 503
                +R ++ HG  +  + L  +I   +RSL  F    +     +   C   L +LRVL
Sbjct: 407 RSLSKSRRLSVHGGNALPS-LGQTINKKVRSLLYFAFEDEFCILESTTPCFRSLPLLRVL 465

Query: 504 DLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAAL 563
           DL  V F                              P SIG L  L+ L++   +I+ L
Sbjct: 466 DLSRVKF-------------------------EGGKLPSSIGDLIHLRFLSLHRAWISHL 500

Query: 564 PS 565
           PS
Sbjct: 501 PS 502
>AT1G58602.1 | chr1:21760167-21763765 FORWARD LENGTH=1139
          Length = 1138

 Score =  186 bits (472), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 274/552 (49%), Gaps = 39/552 (7%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSA---RNVDE 81
           +R  IA+ I ++  R+  V      + + + I       +D Y   +RN+     R   +
Sbjct: 104 DRREIALYIGHVSKRITRVIRDMQSFGVQQMI-------VDDYMHPLRNREREIRRTFPK 156

Query: 82  AELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCN 141
               GF   ++ + +++     +   +V+ + GMGGLGKT L+R++F + + + K F   
Sbjct: 157 DNESGFVALEENVKKLVGYFVEEDNYQVVSITGMGGLGKTTLARQVF-NHDMVTKKFDKL 215

Query: 142 AWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQV--HHLSEYLIEELKEKR 199
           AW++VSQ F     LK++ + +LG     +   + + K ++++  + L   L + L+  +
Sbjct: 216 AWVSVSQDF----TLKNVWQNILGDLKPKEEETKEEEKKILEMTEYTLQRELYQLLEMSK 271

Query: 200 YFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMN 259
             +VLDD+W   DW  I  I FP    KG ++++T+RN  +     T    +  + L+ +
Sbjct: 272 SLIVLDDIWKKEDWEVIKPI-FPPT--KGWKLLLTSRNESIVAPTNTKYFNFKPECLKTD 328

Query: 260 DAITLLLRKTN--KNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS-EWE 316
           D+  L  R      +  + E ++ M+K+ E+++  CG LPLAI  +G +LA K  S +W 
Sbjct: 329 DSWKLFQRIAFPINDASEFEIDEEMEKLGEKMIEHCGGLPLAIKVLGGMLAEKYTSHDWR 388

Query: 317 KFYEHLPSELE------INPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNR 370
           +  E++ S L        + +  +   +++L +  LPS+LK CFLYL+ FPED+EIK   
Sbjct: 389 RLSENIGSHLVGGRTNFNDDNNNSCNYVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVEN 448

Query: 371 LVGRWIAEGFVRPKV--GMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRD 428
           L   W AE   +P+   G   +DVG+ Y  EL+ R+M+   R     + +TC +HD++R+
Sbjct: 449 LSYYWAAEEIFQPRHYDGEIIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMRE 508

Query: 429 ITVSISRQENFVLLPMGDGSDLVQENT---RHIAFH--GSMSCKTGLDWSIIRSLAIFGD 483
           + +  +++ENF+ +     S    ++T   R + +    ++  +  ++   +RSL +   
Sbjct: 509 VCLLKAKEENFLQITSNPPSTANFQSTVTSRRLVYQYPTTLHVEKDINNPKLRSLVVVTL 568

Query: 484 RPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRS 543
              ++A +    +L +LRVLDL     L   K    I  L HL+             P S
Sbjct: 569 GSWNMAGSSF-TRLELLRVLDLVQAK-LKGGKLASCIGKLIHLR-YLSLEYAEVTHIPYS 625

Query: 544 IGKLQGLQTLNM 555
           +G L+ L  LN+
Sbjct: 626 LGNLKLLIYLNL 637
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
          Length = 847

 Score =  183 bits (465), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 251/514 (48%), Gaps = 50/514 (9%)

Query: 74  QSARNVDEAE-LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEE 132
           + AR+ D+ E +VG +D  K LL  +  +  D    +I + GM GLGKT+L+RK+F S  
Sbjct: 150 RRARSDDQEERVVGLTDDAKVLLTKLLDDDGDNKIYMISIFGMEGLGKTSLARKLFNSS- 208

Query: 133 DIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSS--LDQLLQELQGKVVVQVHHLSEY 190
           D++++F    W  VS   +  ++L  +I  L   S   L+++ Q+           L  Y
Sbjct: 209 DVKESFEYRVWTNVSGECNTRDILMRIISSLEETSEGELEKMAQQ----------ELEVY 258

Query: 191 LIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLV 250
           L + L+EKRY VV+DD+W       +   A P  + +GSR++ITT    +AE        
Sbjct: 259 LHDILQEKRYLVVVDDIWESEALESLKR-ALP-CSYQGSRVIITTSIRVVAEGRDKRVYT 316

Query: 251 YHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATK 310
           +++ FL   ++  L  +K  +    ++ ++ +QK+ + +V KCG LP   + +  +++ K
Sbjct: 317 HNIRFLTFKESWNLFEKKAFRYI--LKVDQELQKIGKEMVQKCGGLPRTTVVLAGLMSRK 374

Query: 311 QVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNR 370
           + +EW   +    S L +      +  +  L +  +   LK CFLYLS+FPED+E+   +
Sbjct: 375 KPNEWNDVW----SSLRVKDDNIHVSSLFDLSFKDMGHELKLCFLYLSVFPEDYEVDVEK 430

Query: 371 LVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDIT 430
           L+   +AEGF++    MT +DV   Y  +L+  S+++  +    GK+ + RIHD++R+ T
Sbjct: 431 LIQLLVAEGFIQEDEEMTMEDVARYYIEDLVYISLVEVVKRK-KGKLMSFRIHDLVREFT 489

Query: 431 VSISRQENFVLLPMGDGSDLVQENTRHIAFH---GSMSCKTGLDWSIIRSLAIFGDRPKS 487
           +  S++ NFV   + D       + R +  H    +  C   ++ + +RS   FG R   
Sbjct: 490 IKKSKELNFV--NVYDEQHSSTTSRREVVHHLMDDNYLCDRRVN-TQMRSFLFFGKRRND 546

Query: 488 LAHA-VCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGK 546
           + +      +L++LRVL+L  + F            +C                P  IG 
Sbjct: 547 ITYVETITLKLKLLRVLNLGGLHF------------ICQ--------GYSPWSLPDVIGG 586

Query: 547 LQGLQTLNMPSTYIAALPSEISKLQCLHTLRCIG 580
           L  L+ L +  T +  LP  IS L+ L TL   G
Sbjct: 587 LVHLRYLGIADTVVNNLPDFISNLRFLQTLDASG 620
>AT3G14470.1 | chr3:4857940-4861104 FORWARD LENGTH=1055
          Length = 1054

 Score =  155 bits (393), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 255/529 (48%), Gaps = 64/529 (12%)

Query: 79  VDEAELVGFSDSKKRLLE-MIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKN 137
           VDE+E+ G  D K  ++  +I  N  D    V+ +VG+GG+GKT LS+ ++ +++ +R  
Sbjct: 167 VDESEVFGRDDDKDEIMRFLIPENGKDNGITVVAIVGIGGVGKTTLSQLLY-NDQHVRSY 225

Query: 138 FPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKE 197
           F    W  VS+ F   ++ K +   +           E     V+QV         +LKE
Sbjct: 226 FGTKVWAHVSEEFDVFKITKKVYESVTSRPC------EFTDLDVLQV---------KLKE 270

Query: 198 K------RYFVVLDDLWI--LHDWNWINEIAFPKNNKKGSRIVITTRNVDLAE-KCATAS 248
           +       + +VLDDLW     DW+ + +     +  +GS+I++TTR+  +A   CA   
Sbjct: 271 RLTGTGLPFLLVLDDLWNENFADWDLLRQPFI--HAAQGSQILVTTRSQRVASIMCAVH- 327

Query: 249 LVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLA 308
            V++L  L   D  +L ++    N E    N+ +  + ERIV+KC  LPLA+ T+G VL 
Sbjct: 328 -VHNLQPLSDGDCWSLFMKTVFGNQEPC-LNREIGDLAERIVHKCRGLPLAVKTLGGVLR 385

Query: 309 TK-QVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIK 367
            + +V EWE+       +L  + S   L  ++ + Y +LP+HLK CF Y SIFP+    +
Sbjct: 386 FEGKVIEWERVLSSRIWDLPADKS--NLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFE 443

Query: 368 RNRLVGRWIAEGFV-RPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDII 426
           ++++V  W+AEGF+ + +     +++G  YF+EL +RS++Q+++           +HD I
Sbjct: 444 KDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTKTRYI-------MHDFI 496

Query: 427 RDITVSISRQENFVLLPMGDGSDL-VQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGD-R 484
            ++    S + +       DG  L V E TR++++      +  +++  +R +       
Sbjct: 497 NELAQFASGEFSS---KFEDGCKLQVSERTRYLSYLRDNYAEP-MEFEALREVKFLRTFL 552

Query: 485 PKSL---AHAVCPDQ---------LRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXX 532
           P SL   + + C DQ         L  LRVL L    + I +   D    + H +     
Sbjct: 553 PLSLTNSSRSCCLDQMVSEKLLPTLTRLRVLSLSH--YKIARLPPDFFKNISHAR-FLDL 609

Query: 533 XXXXXXXXPRSIGKLQGLQTLNMP-STYIAALPSEISKLQCLHTLRCIG 580
                   P+S+  +  LQTL +   + +  LP++IS L  L  L  IG
Sbjct: 610 SRTELEKLPKSLCYMYNLQTLLLSYCSSLKELPTDISNLINLRYLDLIG 658
>AT3G14460.1 | chr3:4851990-4856264 REVERSE LENGTH=1425
          Length = 1424

 Score =  145 bits (367), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 242/536 (45%), Gaps = 63/536 (11%)

Query: 78  NVDEAELVGFSDSKKRLLEMI--DTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIR 135
           ++ +  LVG  + K  L+ ++  D   + G   VI VVGM G+GKT L+  +F ++  + 
Sbjct: 162 DLPQGRLVGRVEDKLALVNLLLSDDEISIGKPAVISVVGMPGVGKTTLTEIVF-NDYRVT 220

Query: 136 KNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEEL 195
           ++F    WI+   +F+   + K +++ +   +   + L  LQ +           L + L
Sbjct: 221 EHFEVKMWISAGINFNVFTVTKAVLQDITSSAVNTEDLPSLQIQ-----------LKKTL 269

Query: 196 KEKRYFVVLDDLWILHDWNWIN-EIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLD 254
             KR+ +VLDD W   D  W + ++AF  + ++GS+IV+TTR+ ++    A A  +Y + 
Sbjct: 270 SGKRFLLVLDDFWSESDSEWESFQVAF-TDAEEGSKIVLTTRS-EIVSTVAKAEKIYQMK 327

Query: 255 FLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATK-QVS 313
            +   +   L+ R    N      N+ ++ + +RI  +C  LPLA   I + L +K    
Sbjct: 328 LMTNEECWELISRFAFGNISVGSINQELEGIGKRIAEQCKGLPLAARAIASHLRSKPNPD 387

Query: 314 EWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVG 373
           +W    ++  S    N  L  L+    L Y+ LP  LK CF   SIFP+     R  LV 
Sbjct: 388 DWYAVSKNFSSY--TNSILPVLK----LSYDSLPPQLKRCFALCSIFPKGHVFDREELVL 441

Query: 374 RWIA-EGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVS 432
            W+A +   +P+     +D+G  Y  +L+ +S  QR  + +   +    +HD++ D+  +
Sbjct: 442 LWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRLDITMTSFV----MHDLMNDLAKA 497

Query: 433 ISRQENFVLLPMGDGSDLVQENTRHIAFH--------------GSMSCKTGLDWSIIRSL 478
           +S   +F      D    +   TRH +F               G+   +T L ++   SL
Sbjct: 498 VSG--DFCFRLEDDNIPEIPSTTRHFSFSRSQCDASVAFRSICGAEFLRTILPFNSPTSL 555

Query: 479 ---------------AIFGDRPKSLAH---AVCPDQLRMLRVLDLEDVTFLITQKDFDHI 520
                          A+ G R  SL+H      P  L+ L++L   D++    ++  + +
Sbjct: 556 ESLQLTEKVLNPLLNALSGLRILSLSHYQITNLPKSLKGLKLLRYLDLSSTKIKELPEFV 615

Query: 521 ALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTL 576
             LC+L+             P+SI +L  L+ L++  T +  +P  I KL+ L  L
Sbjct: 616 CTLCNLQTLLLSNCRDLTSLPKSIAELINLRLLDLVGTPLVEMPPGIKKLRSLQKL 671
>AT1G12280.1 | chr1:4174875-4177559 REVERSE LENGTH=895
          Length = 894

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 238/502 (47%), Gaps = 60/502 (11%)

Query: 91  KKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQS- 149
           ++ +LE + T   +   +++ + GMGG+GKT L  +I     +    F    W+ VS+S 
Sbjct: 160 QETMLERVWTRLTEDGDEIVGLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSP 219

Query: 150 -FHRIELLKDMIRQL-LGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDL 207
             HRI+   D+ ++L LG    D + +  +   +  V          L ++++ ++LDD+
Sbjct: 220 DIHRIQ--GDIGKRLDLGGEEWDNVNENQRALDIYNV----------LGKQKFVLLLDDI 267

Query: 208 WILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLR 267
           W   +   +  + +P + + G ++V TTR+ D+  +      +  +  L+ N+A  L   
Sbjct: 268 WEKVNLEVLG-VPYP-SRQNGCKVVFTTRSRDVCGRMRVDDPM-EVSCLEPNEAWELFQM 324

Query: 268 KTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSEL 326
           K  +N   ++ + ++ ++  ++  KC  LPLA+  IG  +A K+ V EW    + L S  
Sbjct: 325 KVGENT--LKGHPDIPELARKVAGKCCGLPLALNVIGETMACKRMVQEWRNAIDVLSSYA 382

Query: 327 EINPSLEALRRMVTLGYNHL-PSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKV 385
              P +E +  ++   Y++L    +KPCFLY S+FPED+ +++ RL+  WI EGF+    
Sbjct: 383 AEFPGMEQILPILKYSYDNLNKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFIDEN- 441

Query: 386 GMTTKDVGESYFNELINRSMIQRSRVGIAGKI--KTCRIHDIIRDITVSISRQENFVLLP 443
              +++   S   E+I   ++ R+ + +   I  +  ++HD++R++ + I+         
Sbjct: 442 --ESRERALSQGYEII--GILVRACLLLEEAINKEQVKMHDVVREMALWIA--------- 488

Query: 444 MGDGSDLVQENTRHIAFHGSMSCKTGL-------DWSIIRSLAIFGDRPKSLAHAVCPDQ 496
               SDL +   R I   G      GL       +WS +R +++  +  + L+ +  P+ 
Sbjct: 489 ----SDLGEHKERCIVQVG-----VGLREVPKVKNWSSVRRMSLMENEIEILSGS--PEC 537

Query: 497 LRMLRV-LDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNM 555
           L +  + L   D    I+ + F  I +L  L              P  I KL  L+ L++
Sbjct: 538 LELTTLFLQKNDSLLHISDEFFRCIPMLVVLD---LSGNSSLRKLPNQISKLVSLRYLDL 594

Query: 556 PSTYIAALPSEISKLQCLHTLR 577
             TYI  LP  + +L+ L  LR
Sbjct: 595 SWTYIKRLPVGLQELKKLRYLR 616
>AT1G51480.1 | chr1:19090847-19094306 REVERSE LENGTH=942
          Length = 941

 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 247/532 (46%), Gaps = 56/532 (10%)

Query: 94  LLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRI 153
           ++EM   +  +   + +C+ GMGG+GKT L   I     ++   F    W+ VS+ F ++
Sbjct: 247 MVEMAWKSLMNDEIRTLCLHGMGGVGKTTLLACINNKFVELESEFDVVIWVVVSKDF-QL 305

Query: 154 ELLKDMIRQLLGPSSLDQLLQ-ELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHD 212
           E ++D   Q+LG   LD+  + E + K    +++        LK K++ ++LDDLW   D
Sbjct: 306 EGIQD---QILGRLRLDKEWERETENKKASLINN-------NLKRKKFVLLLDDLWSEVD 355

Query: 213 WNWINEIAFPKNNKK-GSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNK 271
              +N+I  P   ++ G++IV T R+ +++ K   A +   +  L  ++A  L   +   
Sbjct: 356 ---LNKIGVPPPTRENGAKIVFTKRSKEVS-KYMKADMQIKVSCLSPDEAWELF--RITV 409

Query: 272 NHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHL--PSELEI 328
           +   + S++++  +   +  KC  LPLA++ IG  +A K+ + EW      L  P+  + 
Sbjct: 410 DDVILSSHEDIPALARIVAAKCHGLPLALIVIGEAMACKETIQEWHHAINVLNSPAGHKF 469

Query: 329 NPSLEALRRMVTLGYNHLPS-HLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGM 387
               E +  ++   Y+ L +  +K CFLY S+FPEDFEI++ +L+  WI EG++ P    
Sbjct: 470 PGMEERILLVLKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKEKLIEYWICEGYINPN--- 526

Query: 388 TTKDVGESYFNELINRSMIQRSRVGIAGKIKT-CRIHDIIRDITVSIS----RQENFVLL 442
             +D G +   ++I   ++ R+ + I  ++ T  ++H +IR++ + I+    +Q+  + +
Sbjct: 527 RYEDGGTNQGYDII--GLLVRAHLLIECELTTKVKMHYVIREMALWINSDFGKQQETICV 584

Query: 443 PMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRV 502
             G    ++  +               ++W I+R +++   + + ++   C  +   L  
Sbjct: 585 KSGAHVRMIPND---------------INWEIVRQVSLISTQIEKIS---CSSKCSNLST 626

Query: 503 LDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAA 562
           L L     +     F     +  L              P  I  L  LQ LN+ ST I +
Sbjct: 627 LLLPYNKLVNISVGF--FLFMPKLVVLDLSTNMSLIELPEEISNLCSLQYLNLSSTGIKS 684

Query: 563 LPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLPKVFTPLVSRDD 614
           LP  + KL+ L  L    +F Y   SL      + N   L K+F   V  DD
Sbjct: 685 LPGGMKKLRKLIYLNL--EFSYKLESLVGISATLPNLQVL-KLFYSNVCVDD 733
>AT5G43730.1 | chr5:17560267-17562813 FORWARD LENGTH=849
          Length = 848

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 222/483 (45%), Gaps = 58/483 (12%)

Query: 104 DGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQL 163
           D   + + + GMGG+GKT L   +     ++   F    W+ VS+ F ++E ++D I   
Sbjct: 169 DDEIRTLGLYGMGGIGKTTLLESLNNKFVELESEFDVVIWVVVSKDF-QLEGIQDQILGR 227

Query: 164 LGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK 223
           L P    +  +E + K    +++        LK K++ ++LDDLW   + + I     P 
Sbjct: 228 LRPDK--EWERETESKKASLINN-------NLKRKKFVLLLDDLW--SEVDLIKIGVPPP 276

Query: 224 NNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQ 283
           + + GS+IV TTR+ ++  K   A     +D L  ++A  L   +       + S++++ 
Sbjct: 277 SRENGSKIVFTTRSKEVC-KHMKADKQIKVDCLSPDEAWELF--RLTVGDIILRSHQDIP 333

Query: 284 KMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSELEINPSLEA-LRRMVTL 341
            +   +  KC  LPLA+  IG  +  K+ V EW      L S     P +E  +  ++  
Sbjct: 334 ALARIVAAKCHGLPLALNVIGKAMVCKETVQEWRHAINVLNSPGHKFPGMEERILPILKF 393

Query: 342 GYNHLPS-HLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNEL 400
            Y+ L +  +K CFLY S+FPEDFEI++++L+  WI EG++ P      +D G +   ++
Sbjct: 394 SYDSLKNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPN---RYEDGGTNQGYDI 450

Query: 401 INRSMIQRSRVGIAGKI-KTCRIHDIIRDITVSIS----RQENFVLLPMGDGSDLVQENT 455
           I   ++ R+ + I  ++    ++HD+IR++ + I+     Q+  + +  G    L+  + 
Sbjct: 451 I--GLLVRAHLLIECELTDKVKMHDVIREMALWINSDFGNQQETICVKSGAHVRLIPND- 507

Query: 456 RHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAV-CPDQLRML----RVLDLEDVTF 510
                         + W I+R +++   + + +A +  CP+   +L    +++D+    F
Sbjct: 508 --------------ISWEIVRQMSLISTQVEKIACSPNCPNLSTLLLPYNKLVDISVGFF 553

Query: 511 LITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKL 570
           L   K          L              P  I  L  LQ LN+  T I +LP  + KL
Sbjct: 554 LFMPK----------LVVLDLSTNWSLIELPEEISNLGSLQYLNLSLTGIKSLPVGLKKL 603

Query: 571 QCL 573
           + L
Sbjct: 604 RKL 606
>AT5G43740.1 | chr5:17566010-17568598 FORWARD LENGTH=863
          Length = 862

 Score =  118 bits (296), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 237/514 (46%), Gaps = 73/514 (14%)

Query: 81  EAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPC 140
           E +L+  +    +L+EM  ++  +     + + GMGG+GKT L   +     ++   F  
Sbjct: 145 EKKLIQTTVGLDKLVEMAWSSLMNDEIGTLGLYGMGGVGKTTLLESLNNKFVELESEFDV 204

Query: 141 NAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQ-ELQGKVVVQVHHLSEYLIEELKEKR 199
             W+ VS+ F + E ++D   Q+LG    D+  + E + K    +++        L+ K+
Sbjct: 205 VIWVVVSKDF-QFEGIQD---QILGRLRSDKEWERETESKKASLIYN-------NLERKK 253

Query: 200 YFVVLDDLWILHDWNWINEIAFPKNNKK-GSRIVITTRNVDLAE----------KCATAS 248
           + ++LDDLW   D   + +I  P   ++ GS+IV TTR+ ++ +           C +  
Sbjct: 254 FVLLLDDLWSEVD---MTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKVACLSPD 310

Query: 249 LVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLA 308
             + L  L + D I        ++H+D+ +      +   +  KC  LPLA+  IG  ++
Sbjct: 311 EAWELFRLTVGDIIL-------RSHQDIPA------LARIVAAKCHGLPLALNVIGKAMS 357

Query: 309 TKQ-VSEWEKFYEHLPSELEINPSLEA-LRRMVTLGYNHLPS-HLKPCFLYLSIFPEDFE 365
            K+ + EW      L S     P +E  +  ++   Y+ L +  +K CFLY S+FPED E
Sbjct: 358 CKETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSE 417

Query: 366 IKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKI-KTCRIHD 424
           I + + +  WI EGF+ P      +D G ++  ++I   ++ R+ + I  ++    ++HD
Sbjct: 418 IPKEKWIEYWICEGFINPN---RYEDGGTNHGYDII--GLLVRAHLLIECELTDNVKMHD 472

Query: 425 IIRDITVSIS----RQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAI 480
           +IR++ + I+    +Q+  + +  G    ++  +               ++W I+R+++ 
Sbjct: 473 VIREMALWINSDFGKQQETICVKSGAHVRMIPND---------------INWEIVRTMSF 517

Query: 481 FGDRPKSLA-HAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXX 539
              + K ++  + CP+ L  L +LD   +   I+ + F  +  L  L             
Sbjct: 518 TCTQIKKISCRSKCPN-LSTLLILD-NRLLVKISNRFFRFMPKLVVLD---LSANLDLIK 572

Query: 540 XPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCL 573
            P  I  L  LQ LN+  T I +LP  + KL+ L
Sbjct: 573 LPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKL 606
>AT4G10780.1 | chr4:6634779-6637457 REVERSE LENGTH=893
          Length = 892

 Score =  117 bits (293), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 220/480 (45%), Gaps = 49/480 (10%)

Query: 104 DGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQL 163
           D     + + GMGG+GKT L  +I  +  D +       W+ VS      ++ +D+  +L
Sbjct: 170 DDGVGTMGLYGMGGVGKTTLLTQIHNTLHDTKNGVDIVIWVVVSSDLQIHKIQEDIGEKL 229

Query: 164 LGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK 223
                     QE Q  V +         +  L +KR+ ++LDD+W   D   + +I  P 
Sbjct: 230 GFIGKEWNKKQESQKAVDI---------LNCLSKKRFVLLLDDIWKKVD---LTKIGIPS 277

Query: 224 NNKKG-SRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNM 282
             ++   ++V TTR++D+  +      +  +  L  NDA  L   K  +    + S+ ++
Sbjct: 278 QTRENKCKVVFTTRSLDVCARMGVHDPM-EVQCLSTNDAWELFQEKVGQI--SLGSHPDI 334

Query: 283 QKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPS-ELEINPSLEALRRMVT 340
            ++ +++  KC  LPLA+  IG  +A K+ V EW    + L S   E +   + +  ++ 
Sbjct: 335 LELAKKVAGKCRGLPLALNVIGETMAGKRAVQEWHHAVDVLTSYAAEFSGMDDHILLILK 394

Query: 341 LGYNHL-PSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNE 399
             Y++L   H++ CF Y +++PED+ IK+ RL+  WI EGF+   +G   + V + Y  E
Sbjct: 395 YSYDNLNDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFIDGNIG-KERAVNQGY--E 451

Query: 400 LINRSMIQRSRVGIAGKIK-TCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHI 458
           ++  ++++   +   GK K   ++HD++R+             + +   SDL +   R I
Sbjct: 452 ILG-TLVRACLLSEEGKNKLEVKMHDVVRE-------------MALWTLSDLGKNKERCI 497

Query: 459 AFHGSMSCKTGL--DWSIIRSLAIFGDRPKSLAHAV-CPDQLRMLRVLDLEDVTFL--IT 513
              GS   K     DW  +R L++  +  + ++ +  CP+    L  L L++   L  I+
Sbjct: 498 VQAGSGLRKVPKVEDWGAVRRLSLMNNGIEEISGSPECPE----LTTLFLQENKSLVHIS 553

Query: 514 QKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCL 573
            + F H+  L  L              P  I +L  L+ L++  T I  LP+ +  L+ L
Sbjct: 554 GEFFRHMRKLVVLD---LSENHQLDGLPEQISELVALRYLDLSHTNIEGLPACLQDLKTL 610
>AT4G27190.1 | chr4:13620977-13623934 REVERSE LENGTH=986
          Length = 985

 Score =  115 bits (289), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 174/351 (49%), Gaps = 34/351 (9%)

Query: 107 AKVICVVGMGGLGKTALSRKIFES--EEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLL 164
           A+ I V GMGG+GKT L R +     EE   + F    ++ VS+ F   E+ K +  +L 
Sbjct: 164 AQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFDPREVQKQIAERL- 222

Query: 165 GPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKN 224
               +D  ++E + K+  +++      +  +KE+++ ++LDD+W   D   ++ +  P+ 
Sbjct: 223 ---DIDTQMEESEEKLARRIY------VGLMKERKFLLILDDVWKPID---LDLLGIPRT 270

Query: 225 NK-KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQ 283
            + KGS++++T+R +++     T  L   +D L   DA  L      KN  D+  + +++
Sbjct: 271 EENKGSKVILTSRFLEVCRSMKT-DLDVRVDCLLEEDAWELFC----KNAGDVVRSDHVR 325

Query: 284 KMVERIVNKCGRLPLAILTIG-AVLATKQVSEWEKFYEHLPSELEINPSLE-ALRRMVTL 341
           K+ + +  +CG LPLAI+T+G A+   K V  W      L   +    S+E  + + + L
Sbjct: 326 KIAKAVSQECGGLPLAIITVGTAMRGKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKL 385

Query: 342 GYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELI 401
            Y+ L    K CFL  ++FPED+ I+   +V  W+AEGF      M      E   NE I
Sbjct: 386 SYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGF------MEELGSQEDSMNEGI 439

Query: 402 N--RSMIQRSRVGIAGKIKTCRIHDIIRDITVSI---SRQENFVLLPMGDG 447
               S+     +    +  T ++HD++RD  + I   S+ ++  L+  G G
Sbjct: 440 TTVESLKDYCLLEDGDRRDTVKMHDVVRDFAIWIMSSSQDDSHSLVMSGTG 490
>AT1G15890.1 | chr1:5461406-5463961 FORWARD LENGTH=852
          Length = 851

 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/469 (24%), Positives = 211/469 (44%), Gaps = 54/469 (11%)

Query: 114 GMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLL 173
           GMGG+GKT L   I     +    F    W+ VS+        + +  Q+LG   L +  
Sbjct: 181 GMGGVGKTTLLASINNKFLEGMNGFDLVIWVVVSKDLQN----EGIQEQILGRLGLHRGW 236

Query: 174 QELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK-NNKKGSRIV 232
           +++  K        + Y+   L  K++ ++LDDLW   D   + +I  P    + GS+IV
Sbjct: 237 KQVTEK------EKASYICNILNVKKFVLLLDDLWSEVD---LEKIGVPPLTRENGSKIV 287

Query: 233 ITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTN----KNHEDMESNKNMQKMVER 288
            TTR+ D+         +  +D L  ++A  L  +K      ++HED+ +      +  +
Sbjct: 288 FTTRSKDVCRDMEVDGEM-KVDCLPPDEAWELFQKKVGPIPLQSHEDIPT------LARK 340

Query: 289 IVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSELEINPSLE-ALRRMVTLGYNHL 346
           +  KC  LPLA+  IG  +A+++ V EW+     L S     PS+E  +  ++   Y+ L
Sbjct: 341 VAEKCCGLPLALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDL 400

Query: 347 PSH-LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSM 405
               +K CFLY S+FPED+E+++  L+  W+ EGF+    G   +D   +  +++I    
Sbjct: 401 KDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFID---GNEDEDGANNKGHDIIGS-- 455

Query: 406 IQRSRVGIAGKIKT-CRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSM 464
           + R+ + + G++ T  ++HD+IR++ + I+             S+  ++        G  
Sbjct: 456 LVRAHLLMDGELTTKVKMHDVIREMALWIA-------------SNFGKQKETLCVKPGVQ 502

Query: 465 SCKT--GLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIAL 522
            C     ++W  +R +++  ++   +A+         L  L L++   +    DF     
Sbjct: 503 LCHIPKDINWESLRRMSLMCNQ---IANISSSSNSPNLSTLLLQNNKLVHISCDF--FRF 557

Query: 523 LCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQ 571
           +  L              P +I KL  LQ +N+ +T I  LP    +L+
Sbjct: 558 MPALVVLDLSRNSSLSSLPEAISKLGSLQYINLSTTGIKWLPVSFKELK 606
>AT1G12220.1 | chr1:4145011-4147680 FORWARD LENGTH=890
          Length = 889

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 216/476 (45%), Gaps = 61/476 (12%)

Query: 104 DGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQL 163
           DG   ++ + GMGG+GKT L  KI      I   F    W+ VS+S    ++ +D I + 
Sbjct: 174 DGSG-ILGLYGMGGVGKTTLLTKINNKFSKIDDRFDVVIWVVVSRSSTVRKIQRD-IAEK 231

Query: 164 LGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK 223
           +G   + +  ++   ++ V +H++       L+ +++ ++LDD+W   +   +  + +P 
Sbjct: 232 VGLGGM-EWSEKNDNQIAVDIHNV-------LRRRKFVLLLDDIWEKVNLKAVG-VPYPS 282

Query: 224 NNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQ 283
            +  G ++  TTR+ D+  +      +  +  LQ  ++  L   K  KN   + S+ ++ 
Sbjct: 283 KDN-GCKVAFTTRSRDVCGRMGVDDPM-EVSCLQPEESWDLFQMKVGKN--TLGSHPDIP 338

Query: 284 KMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSE-LEINPSLEALRRMVTL 341
            +  ++  KC  LPLA+  IG  +A K+ V EW    + L S  ++ +   + +  ++  
Sbjct: 339 GLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAIDVLTSSAIDFSGMEDEILHVLKY 398

Query: 342 GYNHLPSHL-KPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESY--FN 398
            Y++L   L K CFLY S+FPED+ I +  LV  WI+EGF+  K G   +++ + Y    
Sbjct: 399 SYDNLNGELMKSCFLYCSLFPEDYLIDKEGLVDYWISEGFINEKEG-RERNINQGYEIIG 457

Query: 399 ELINRSMI---QRSRVGIAGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENT 455
            L+   ++   +R++  +       ++HD++R++ + IS             SDL ++  
Sbjct: 458 TLVRACLLLEEERNKSNV-------KMHDVVREMALWIS-------------SDLGKQKE 497

Query: 456 RHIAFHGSMSCKTGL-------DWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDV 508
           + I   G      GL       DW+ +R +++  +  + +  +    +   L  L L+  
Sbjct: 498 KCIVRAG-----VGLREVPKVKDWNTVRKISLMNNEIEEIFDS---HECAALTTLFLQKN 549

Query: 509 TFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALP 564
             +    +F     + HL              P  I +L  L+  N+  T I  LP
Sbjct: 550 DVVKISAEF--FRCMPHLVVLDLSENQSLNELPEEISELASLRYFNLSYTCIHQLP 603
>AT1G61180.2 | chr1:22551486-22554185 FORWARD LENGTH=900
          Length = 899

 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 204/475 (42%), Gaps = 56/475 (11%)

Query: 114 GMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLL 173
           GMGG+GKT L +KI     +I   F    WI VS+     +L +D+  +L      D L 
Sbjct: 179 GMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSKGVMISKLQEDIAEKL---HLCDDLW 235

Query: 174 Q-ELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIV 232
           + + +      +H +       LK KR+ ++LDD+W   D   I  I +P    K  ++ 
Sbjct: 236 KNKNESDKATDIHRV-------LKGKRFVLMLDDIWEKVDLEAIG-IPYPSEVNK-CKVA 286

Query: 233 ITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNK 292
            TTR+ ++  +      +  ++ L+  DA  L   K   N   + S+  + ++   +  K
Sbjct: 287 FTTRSREVCGEMGDHKPM-QVNCLEPEDAWELFKNKVGDN--TLSSDPVIVELAREVAQK 343

Query: 293 CGRLPLAILTIGAVLATK-QVSEWE-KFYEHLPSELEINPSLEALRRMVTLGYNHL-PSH 349
           C  LPLA+  IG  +++K  V EWE   +    S  E +     +  ++   Y+ L   H
Sbjct: 344 CRGLPLALNVIGETMSSKTMVQEWEHAIHVFNTSAAEFSDMQNKILPILKYSYDSLGDEH 403

Query: 350 LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFV-RPKVGMTTKDVGESYFNELINRSMIQR 408
           +K CFLY ++FPED EI   +L+  WI EGF+   +V    ++ G +    L        
Sbjct: 404 IKSCFLYCALFPEDGEIYNEKLIDYWICEGFIGEDQVIKRARNKGYAMLGTL-------- 455

Query: 409 SRVGIAGKIKT--CRIHDIIRDITVSIS-----RQENFVLLPMGDGSDLVQENTRHIAFH 461
           +R  +  K+ T  C +HD++R++ + I+     ++ENFV          VQ     +  H
Sbjct: 456 TRANLLTKVGTYYCVMHDVVREMALWIASDFGKQKENFV----------VQAG---VGLH 502

Query: 462 GSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIA 521
                K   DW  +R +++  +    +    C  +   L  L L+          F  I 
Sbjct: 503 EIPKVK---DWGAVRKMSLMDN---DIEEITCESKCSELTTLFLQSNKLKNLPGAF--IR 554

Query: 522 LLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTL 576
            +  L              P  I  L  LQ L++ +T I  +P  + +L+ L  L
Sbjct: 555 YMQKLVVLDLSYNRDFNKLPEQISGLVSLQFLDLSNTSIEHMPIGLKELKKLTFL 609
>AT4G26090.1 | chr4:13224596-13227325 FORWARD LENGTH=910
          Length = 909

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 235/517 (45%), Gaps = 68/517 (13%)

Query: 75  SARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDI 134
           + R +    +VG +   +++LE +      G   +I V G GG+GKT L + I  + E I
Sbjct: 146 TCREIPIKSVVGNTTMMEQVLEFLSEEEERG---IIGVYGPGGVGKTTLMQSI--NNELI 200

Query: 135 RK--NFPCNAWITVSQSFHRIELLKDMIRQLLGPS---SLDQLLQELQGKVVVQVHHLSE 189
            K   +    W+ +S+ F         I+Q +G     S D+  +E      ++++    
Sbjct: 201 TKGHQYDVLIWVQMSREFGEC-----TIQQAVGARLGLSWDE--KETGENRALKIYR--- 250

Query: 190 YLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGS-RIVITTRNVDLAEKCATAS 248
                L++KR+ ++LDD+W   D   + +   P+ +++   +++ TTR++ L      A 
Sbjct: 251 ----ALRQKRFLLLLDDVWEEID---LEKTGVPRPDRENKCKVMFTTRSIALCNNMG-AE 302

Query: 249 LVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLA 308
               ++FL+   A  L   K  +  +D+  + +++++ E IV+KCG LPLA++T+G  +A
Sbjct: 303 YKLRVEFLEKKHAWELFCSKVWR--KDLLESSSIRRLAEIIVSKCGGLPLALITLGGAMA 360

Query: 309 TKQVSE-W---EKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHL-KPCFLYLSIFPED 363
            ++  E W    +     P+E++    +  +  ++   Y++L S L + CFLY ++FPE+
Sbjct: 361 HRETEEEWIHASEVLTRFPAEMK---GMNYVFALLKFSYDNLESDLLRSCFLYCALFPEE 417

Query: 364 FEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKT-CRI 422
             I+  +LV  W+ EGF+    G+ T   G     +L    +++       G  KT  ++
Sbjct: 418 HSIEIEQLVEYWVGEGFLTSSHGVNTIYKGYFLIGDLKAACLLE------TGDEKTQVKM 471

Query: 423 HDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFG 482
           H+++R   + ++ ++       G   +L+          G        +W     +++  
Sbjct: 472 HNVVRSFALWMASEQ-------GTYKELILVEPS----MGHTEAPKAENWRQALVISLLD 520

Query: 483 DRPKSLAHA-VCPDQLRMLRVLDLEDVTFL--ITQKDFDHIALLCHLKXXXXXXXXXXXX 539
           +R ++L    +CP     L  L L+  + L  I    F H+ +L  L             
Sbjct: 521 NRIQTLPEKLICPK----LTTLMLQQNSSLKKIPTGFFMHMPVLRVLD----LSFTSITE 572

Query: 540 XPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTL 576
            P SI  L  L  L+M  T I+ LP E+  L+ L  L
Sbjct: 573 IPLSIKYLVELYHLSMSGTKISVLPQELGNLRKLKHL 609
>AT1G61310.1 | chr1:22613166-22615943 REVERSE LENGTH=926
          Length = 925

 Score =  108 bits (271), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 204/478 (42%), Gaps = 51/478 (10%)

Query: 114 GMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLL 173
           GMGG+GKT L +KI     +I   F    WI VSQ     +L +D+  +L      D L 
Sbjct: 181 GMGGVGKTTLFKKIHNKFAEIGGTFDIVIWIVVSQGAKLSKLQEDIAEKL---HLCDDLW 237

Query: 174 Q-ELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIV 232
           + + +      +H +       LK KR+ ++LDD+W   D   I  I +P    K  ++ 
Sbjct: 238 KNKNESDKATDIHRV-------LKGKRFVLMLDDIWEKVDLEAIG-IPYPSEVNK-CKVA 288

Query: 233 ITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNK 292
            TTR+ ++  +      +  ++ L+  DA  L   K   N   + S+  +  +   +  K
Sbjct: 289 FTTRSREVCGEMGDHKPM-QVNCLEPEDAWELFKNKVGDN--TLSSDPVIVGLAREVAQK 345

Query: 293 CGRLPLAILTIGAVLATK-QVSEWEKFYEHLP-SELEINPSLEALRRMVTLGYNHL-PSH 349
           C  LPLA+  IG  +A+K  V EWE   + L  S  E +     +  ++   Y+ L   H
Sbjct: 346 CRGLPLALNVIGETMASKTMVQEWEYAIDVLTRSAAEFSGMENKILPILKYSYDSLGDEH 405

Query: 350 LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFV-RPKVGMTTKDVGESYFNELINRSMIQR 408
           +K CFLY ++FPED +I    L+ + I EGF+   +V    ++ G +    L   +++ +
Sbjct: 406 IKSCFLYCALFPEDGQIYTETLIDKLICEGFIGEDQVIKRARNKGYAMLGTLTRANLLTK 465

Query: 409 SRVGIAG-----KIKTCRIHDIIRDITVSIS-----RQENFVLLPMGDGSDLVQENTRHI 458
               +A       I  C +HD++R++ + I+     ++ENFV          VQ +    
Sbjct: 466 VGTELANLLTKVSIYHCVMHDVVREMALWIASDFGKQKENFV----------VQASA--- 512

Query: 459 AFHGSMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFD 518
             H     K   DW  +R +++  +    +    C  +   L  L L+         +F 
Sbjct: 513 GLHEIPEVK---DWGAVRRMSLMRNE---IEEITCESKCSELTTLFLQSNQLKNLSGEF- 565

Query: 519 HIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTL 576
            I  +  L              P  I  L  LQ L++  T I  LP  + +L+ L  L
Sbjct: 566 -IRYMQKLVVLDLSDNRDFNELPEQISGLVSLQYLDLSFTRIEQLPVGLKELKKLTFL 622
>AT5G63020.1 | chr5:25283252-25286002 REVERSE LENGTH=889
          Length = 888

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 213/479 (44%), Gaps = 66/479 (13%)

Query: 114 GMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLL 173
           GMGG+GKT L   I      +   F    WI VS+    I+ ++D I + L  S  ++  
Sbjct: 181 GMGGVGKTTLLSHINNRFSRVGGEFDIVIWIVVSKELQ-IQRIQDEIWEKLR-SDNEKWK 238

Query: 174 QELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFP-KNNKKGSRIV 232
           Q+ +      ++++       LK KR+ ++LDD+W   D   + E+  P  + + G +IV
Sbjct: 239 QKTEDIKASNIYNV-------LKHKRFVLLLDDIWSKVD---LTEVGVPFPSRENGCKIV 288

Query: 233 ITTRNVDLAEKCATASLVYHLDF--LQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIV 290
            TTR   L E C    +   ++   L  +DA  L  +K  +    + S+  +  +   + 
Sbjct: 289 FTTR---LKEICGRMGVDSDMEVRCLAPDDAWDLFTKKVGEI--TLGSHPEIPTVARTVA 343

Query: 291 NKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSEL-EINPSLEALRRMVTLGYNHLPS 348
            KC  LPLA+  IG  +A K+ V EW    + L S   E +   + +  ++   Y++L S
Sbjct: 344 KKCRGLPLALNVIGETMAYKRTVQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKS 403

Query: 349 -HLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQ 407
             LK CF Y ++FPED  I++N LV  WI EGF+    G       E+   E+I   ++ 
Sbjct: 404 EQLKLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKGK-----AENQGYEII--GILV 456

Query: 408 RSRVGIAGKIKTCRIHDIIRDITVSIS-----RQENFVLLPMGDGSDLVQENTRHIAFHG 462
           RS + +    +T ++HD++R++ + I+     ++ENF++      + L   N   I    
Sbjct: 457 RSCLLMEENQETVKMHDVVREMALWIASDFGKQKENFIV-----QAGLQSRNIPEIE--- 508

Query: 463 SMSCKTGLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIA- 521
                    W + R +++  +  +S+  A    QL          +T L+ +    HI+ 
Sbjct: 509 --------KWKVARRVSLMFNNIESIRDAPESPQL----------ITLLLRKNFLGHISS 550

Query: 522 ----LLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHTL 576
               L+  L              P  I +   LQ L++  T I   P+ + +L+ L  L
Sbjct: 551 SFFRLMPMLVVLDLSMNRDLRHLPNEISECVSLQYLSLSRTRIRIWPAGLVELRKLLYL 609
>AT1G61190.1 | chr1:22557602-22560687 FORWARD LENGTH=968
          Length = 967

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 197/468 (42%), Gaps = 49/468 (10%)

Query: 114 GMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLL 173
           GMGG+GKT L +KI     +    F    WI VSQ     +L +D+  +L      D L 
Sbjct: 180 GMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQEDIAEKL---HLCDDLW 236

Query: 174 Q-ELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIV 232
           + + +      +H +       LK KR+ ++LDD+W   D   I  I +P    K  ++ 
Sbjct: 237 KNKNESDKATDIHRV-------LKGKRFVLMLDDIWEKVDLEAIG-IPYPSEVNK-CKVA 287

Query: 233 ITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNK 292
            TTR+  +  +      +  +  L+  DA  L   K   N   + S+  +  +   +  K
Sbjct: 288 FTTRDQKVCGQMGDHKPM-QVKCLEPEDAWELFKNKVGDN--TLRSDPVIVGLAREVAQK 344

Query: 293 CGRLPLAILTIGAVLATK-QVSEWEKFYEHLP-SELEINPSLEALRRMVTLGYNHLPS-H 349
           C  LPLA+  IG  +A+K  V EWE   + L  S  E +     +  ++   Y+ L   H
Sbjct: 345 CRGLPLALSCIGETMASKTMVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLEDEH 404

Query: 350 LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFV-RPKVGMTTKDVGESYFNELINRSMIQR 408
           +K CFLY ++FPED +I    L+ +WI EGF+   +V    ++ G      LI  +++  
Sbjct: 405 IKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANLLTN 464

Query: 409 SRVGIAGKIKTCRIHDIIRDITVSIS-----RQENFVLLPMGDGSDLVQENTRHIAFHGS 463
            R  +   +    +HD++R++ + I+     ++EN+V+                +  H  
Sbjct: 465 DRGFVKWHVV---MHDVVREMALWIASDFGKQKENYVV-------------RARVGLHEI 508

Query: 464 MSCKTGLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALL 523
              K   DW  +R +++  +    +    C  +   L  L L+         +F  I  +
Sbjct: 509 PKVK---DWGAVRRMSLMMN---EIEEITCESKCSELTTLFLQSNQLKNLSGEF--IRYM 560

Query: 524 CHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQ 571
             L              P  I  L  LQ L++  T I  LP  + +L+
Sbjct: 561 QKLVVLDLSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPVGLKELK 608
>AT4G27220.1 | chr4:13633953-13636712 REVERSE LENGTH=920
          Length = 919

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 189/400 (47%), Gaps = 54/400 (13%)

Query: 73  NQSARNVDEAELVGFSDSKKRLLEMIDTNANDGP---AKVICVVGMGGLGKTALSRKIFE 129
           N+S+R + E  L      +K  LEM+D   +       + I V GMGG+GKT L R +  
Sbjct: 97  NKSSREIVERVLGPSFHPQKTALEMLDKLKDCLKKKNVQKIGVWGMGGVGKTTLVRTL-- 154

Query: 130 SEEDIRK-----NFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVV-- 182
              D+ K      F    W+TVS+ F    +  D+ ++L              GK     
Sbjct: 155 -NNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRL--------------GKRFTRE 199

Query: 183 QVHHLSEYLIEELKE-KRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLA 241
           Q++ L   + E L + K + ++LDD+W   D + +  I       K S++V+T+R +++ 
Sbjct: 200 QMNQLGLTICERLIDLKNFLLILDDVWHPIDLDQLG-IPLALERSKDSKVVLTSRRLEVC 258

Query: 242 EKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAIL 301
           ++  T   +  +  LQ  +A  L       N  ++ ++ N++ + + + ++C  LPLAI+
Sbjct: 259 QQMMTNENI-KVACLQEKEAWELFCH----NVGEVANSDNVKPIAKDVSHECCGLPLAII 313

Query: 302 TIGAVLATK-QVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
           TIG  L  K QV  W+     L        + E +   + L Y+ L  ++K CFL+ ++F
Sbjct: 314 TIGRTLRGKPQVEVWKHTLNLLKRSAPSIDTEEKIFGTLKLSYDFLQDNMKSCFLFCALF 373

Query: 361 PEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINR--SMIQRSRVGI----A 414
           PED+ IK + L+  W+AEG +           G+ ++ +++N   ++++R +        
Sbjct: 374 PEDYSIKVSELIMYWVAEGLLD----------GQHHYEDMMNEGVTLVERLKDSCLLEDG 423

Query: 415 GKIKTCRIHDIIRDITVSI--SRQENFVLLPMGDGSDLVQ 452
               T ++HD++RD  +    S+ E F  L M  G  L++
Sbjct: 424 DSCDTVKMHDVVRDFAIWFMSSQGEGFHSLVMA-GRGLIE 462
>AT1G12210.1 | chr1:4140948-4143605 FORWARD LENGTH=886
          Length = 885

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 213/482 (44%), Gaps = 56/482 (11%)

Query: 109 VICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQ--SFHRIELLKDMIRQLLGP 166
           ++ + GMGG+GKT L  +I      +   F    W+ VS+  + H+I+     I + LG 
Sbjct: 178 IVGLYGMGGVGKTTLLTQINNKFSKLGGGFDVVIWVVVSKNATVHKIQ---KSIGEKLGL 234

Query: 167 SSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK 226
                  ++ + +  + +H++       L+ K++ ++LDD+W   +   I  + +P + +
Sbjct: 235 VG-KNWDEKNKNQRALDIHNV-------LRRKKFVLLLDDIWEKVELKVIG-VPYP-SGE 284

Query: 227 KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMV 286
            G ++  TT + ++  +    + +  +  L   +A  LL +K  +N   + S+ ++ ++ 
Sbjct: 285 NGCKVAFTTHSKEVCGRMGVDNPM-EISCLDTGNAWDLLKKKVGEN--TLGSHPDIPQLA 341

Query: 287 ERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSELEINPSLEALRRMVTLGYNH 345
            ++  KC  LPLA+  IG  ++ K+ + EW    E L S  + +   + +  ++   Y+ 
Sbjct: 342 RKVSEKCCGLPLALNVIGETMSFKRTIQEWRHATEVLTSATDFSGMEDEILPILKYSYDS 401

Query: 346 LPSH-LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTK-DVGESYFNELINR 403
           L     K CFLY S+FPEDFEI++  L+  WI EGF++ K G     + G      L+  
Sbjct: 402 LNGEDAKSCFLYCSLFPEDFEIRKEMLIEYWICEGFIKEKQGREKAFNQGYDILGTLVRS 461

Query: 404 SMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGS 463
           S++       A       +HD++R++ + I              SDL +   R I   G 
Sbjct: 462 SLLLEG----AKDKDVVSMHDMVREMALWIF-------------SDLGKHKERCIVQAG- 503

Query: 464 MSCKTGLD-------WSIIRSLAIFGDR-PKSLAHAVCPDQLRMLRVLDLEDVTFLITQK 515
                GLD       W  ++ +++  +   K L    C +    L  L L++  + +   
Sbjct: 504 ----IGLDELPEVENWRAVKRMSLMNNNFEKILGSPECVE----LITLFLQN-NYKLVDI 554

Query: 516 DFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALPSEISKLQCLHT 575
             +    +  L              P  I +L  LQ L++  TYI  LP  + +L+ L  
Sbjct: 555 SMEFFRCMPSLAVLDLSENHSLSELPEEISELVSLQYLDLSGTYIERLPHGLHELRKLVH 614

Query: 576 LR 577
           L+
Sbjct: 615 LK 616
>AT1G61300.1 | chr1:22607714-22610175 REVERSE LENGTH=763
          Length = 762

 Score =  107 bits (267), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 196/461 (42%), Gaps = 52/461 (11%)

Query: 114 GMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLL 173
           GMGG+GKT L +KI      +   F    WI VS+     +L +D+  +L      D L 
Sbjct: 68  GMGGVGKTTLFKKIHNKFAKMSSRFDIVIWIVVSKGAKLSKLQEDIAEKL---HLCDDLW 124

Query: 174 Q-ELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIV 232
           + + +      +H +       LK KR+ ++LDD+W   D   I  + +P    K  ++ 
Sbjct: 125 KNKNESDKATDIHRV-------LKGKRFVLMLDDIWEKVDLEAIG-VPYPSEVNK-CKVA 175

Query: 233 ITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNK 292
            TTR+  +  +      +  +  L+  DA  L   K   N   + S+  + ++   +  K
Sbjct: 176 FTTRDQKVCGEMGDHKPM-QVKCLEPEDAWELFKNKVGDN--TLRSDPVIVELAREVAQK 232

Query: 293 CGRLPLAILTIGAVLATK-QVSEWEKFYEHLP-SELEINPSLEALRRMVTLGYNHL-PSH 349
           C  LPLA+  IG  +A+K  V EWE   + L  S  E +     +  ++   Y+ L   H
Sbjct: 233 CRGLPLALSVIGETMASKTMVQEWEHAIDVLTRSAAEFSNMGNKILPILKYSYDSLGDEH 292

Query: 350 LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFV-RPKVGMTTKDVGESYFNELINRSMIQR 408
           +K CFLY ++FPED EI   +L+  WI EGF+   +V    ++ G      L   +++  
Sbjct: 293 IKSCFLYCALFPEDDEIYNEKLIDYWICEGFIGEDQVIKRARNKGYEMLGTLTLANLL-- 350

Query: 409 SRVGIAGKIKTCRIHDIIRDITVSIS-----RQENFVLLPMGDGSDLVQENTRHIAFHGS 463
           ++VG    +    +HD++R++ + I+     ++ENFV+                +  H  
Sbjct: 351 TKVGTEHVV----MHDVVREMALWIASDFGKQKENFVV-------------RARVGLHER 393

Query: 464 MSCKTGLDWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVLDLEDVTFLITQKDFDHIALL 523
              K   DW  +R +++  +    +    C  +   L  L L+         +F  I  +
Sbjct: 394 PEAK---DWGAVRRMSLMDNH---IEEITCESKCSELTTLFLQSNQLKNLSGEF--IRYM 445

Query: 524 CHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAALP 564
             L              P  I  L  LQ L++ +T I  LP
Sbjct: 446 QKLVVLDLSYNRDFNKLPEQISGLVSLQFLDLSNTSIKQLP 486
>AT5G05400.1 | chr5:1597745-1600369 REVERSE LENGTH=875
          Length = 874

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 154/326 (47%), Gaps = 33/326 (10%)

Query: 112 VVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQ 171
           + GMGG+GKT L  +I      +  +F    W+ VS++     + +D+ ++L        
Sbjct: 180 IYGMGGVGKTTLLSQINNKFRTVSNDFDIAIWVVVSKNPTVKRIQEDIGKRL-------D 232

Query: 172 LLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRI 231
           L  E  G      + ++  +   L+ K+Y ++LDD+W   D   +  I  P   + GS+I
Sbjct: 233 LYNE--GWEQKTENEIASTIKRSLENKKYMLLLDDMWTKVD---LANIGIPVPKRNGSKI 287

Query: 232 VITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVN 291
             T+R+ ++  K      +  +  L  +DA  L  R      E +ES+  + ++ + I  
Sbjct: 288 AFTSRSNEVCGKMGVDKEI-EVTCLMWDDAWDLFTRNMK---ETLESHPKIPEVAKSIAR 343

Query: 292 KCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPSELEINPSLEA-LRRMVTLGYNHLPSH 349
           KC  LPLA+  IG  +A K+ + EW          + +   +EA +  ++   Y+ L   
Sbjct: 344 KCNGLPLALNVIGETMARKKSIEEWH-------DAVGVFSGIEADILSILKFSYDDLKCE 396

Query: 350 -LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQR 408
             K CFL+ ++FPED+EI ++ L+  W+ +G +    G+  K  G +    L    +++ 
Sbjct: 397 KTKSCFLFSALFPEDYEIGKDDLIEYWVGQGIILGSKGINYK--GYTIIGTLTRAYLLKE 454

Query: 409 SRVGIAGKIKTCRIHDIIRDITVSIS 434
           S        +  ++HD++R++ + IS
Sbjct: 455 SETK-----EKVKMHDVVREMALWIS 475
>AT5G47250.1 | chr5:19186045-19188576 REVERSE LENGTH=844
          Length = 843

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 220/492 (44%), Gaps = 47/492 (9%)

Query: 83  ELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNA 142
           + VG   + ++  E +  + N    +++ + GMGG+GKT L   I     ++  ++    
Sbjct: 156 QTVGLDTTLEKTWESLRKDEN----RMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDVVI 211

Query: 143 WITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFV 202
           W+  S+    +  ++D I + L     +      +GK   ++  +    + ++K  R+ +
Sbjct: 212 WVESSKD-ADVGKIQDAIGERLHICD-NNWSTYSRGKKASEISRV----LRDMK-PRFVL 264

Query: 203 VLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAI 262
           +LDDLW   D + +  I  P   KK  ++V TTR+ D+      A+    +  L  NDA 
Sbjct: 265 LLDDLW--EDVS-LTAIGIPVLGKK-YKVVFTTRSKDVCS-VMRANEDIEVQCLSENDAW 319

Query: 263 TLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEH 321
            L   K +      +    +  + ++IV KC  LPLA+  I   +A+K  V +W +  + 
Sbjct: 320 DLFDMKVH-----CDGLNEISDIAKKIVAKCCGLPLALEVIRKTMASKSTVIQWRRALDT 374

Query: 322 LPS-ELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGF 380
           L S   E+  + + + +++ L Y++L +    CFLY ++FP+ + IK++ LV  WI EGF
Sbjct: 375 LESYRSEMKGTEKGIFQVLKLSYDYLKTKNAKCFLYCALFPKAYYIKQDELVEYWIGEGF 434

Query: 381 VRPKVGMT-TKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENF 439
           +  K G    KD G    + L+   ++  S        K   +HD+IRD+ +       +
Sbjct: 435 IDEKDGRERAKDRGYEIIDNLVGAGLLLESN-------KKVYMHDMIRDMAL-------W 480

Query: 440 VLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWSIIRSLAIFGDRPKSLA-HAVCPDQLR 498
           ++    DG   V +    ++    ++     DW+ +  +++F +  K++      PDQ  
Sbjct: 481 IVSEFRDGERYVVKTDAGLSQLPDVT-----DWTTVTKMSLFNNEIKNIPDDPEFPDQTN 535

Query: 499 MLRVLDLEDVTFLITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPST 558
           ++ +    +    I  K F  ++ L  L              P+ I  L  L+ LN+  T
Sbjct: 536 LVTLFLQNNRLVDIVGKFFLVMSTLVVLD---LSWNFQITELPKGISALVSLRLLNLSGT 592

Query: 559 YIAALPSEISKL 570
            I  LP  +  L
Sbjct: 593 SIKHLPEGLGVL 604
>AT1G12290.1 | chr1:4178593-4181247 REVERSE LENGTH=885
          Length = 884

 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 38/344 (11%)

Query: 104 DGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQL 163
           D   K++ + GMGG+GKT L  +I     D         W+ VS    +I  ++  I + 
Sbjct: 172 DDGTKIMGLYGMGGVGKTTLLTQINNRFCDTDDGVEIVIWVVVSGDL-QIHKIQKEIGEK 230

Query: 164 LGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK 223
           +G   ++   +    K V  ++ LS+        KR+ ++LDD+W   +   + EI  P 
Sbjct: 231 IGFIGVEWNQKSENQKAVDILNFLSK--------KRFVLLLDDIWKRVE---LTEIGIPN 279

Query: 224 -NNKKGSRIVITTRNVDLAEKCATASLVYH----LDFLQMNDAITLLLRKTNKNHEDMES 278
             ++ G +I  TTR      +   AS+  H    +  L  +DA  L  +K       + S
Sbjct: 280 PTSENGCKIAFTTRC-----QSVCASMGVHDPMEVRCLGADDAWDLFKKKVGDI--TLSS 332

Query: 279 NKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS-EWEKFYE-HLPSELEINPSLEALR 336
           + ++ ++  ++   C  LPLA+  IG  +A K+ + EW++  +             E + 
Sbjct: 333 HPDIPEIARKVAQACCGLPLALNVIGETMACKKTTQEWDRAVDVSTTYAANFGAVKERIL 392

Query: 337 RMVTLGYNHLPSH-LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKD--VG 393
            ++   Y++L S  +K CFLY S+FPED  I++ RL+  WI EGF+    G   K   VG
Sbjct: 393 PILKYSYDNLESESVKTCFLYCSLFPEDDLIEKERLIDYWICEGFID---GDENKKGAVG 449

Query: 394 ESYFNELINRSMIQRSRVGIAGKIKT---CRIHDIIRDITVSIS 434
           E Y  E++  +++  S +   GK       ++HD++R++ + I+
Sbjct: 450 EGY--EILG-TLVCASLLVEGGKFNNKSYVKMHDVVREMALWIA 490
>AT1G63350.1 | chr1:23494935-23497631 REVERSE LENGTH=899
          Length = 898

 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 213/489 (43%), Gaps = 53/489 (10%)

Query: 97  MIDTNAN----DGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHR 152
           M+D   N    DG   ++ + GMGG+GKT L  +I          F    W+ VS+  + 
Sbjct: 159 MLDNAWNHLMEDGVG-IMGLYGMGGVGKTTLLTQINNKFSKYMCGFDSVIWVVVSKEVNV 217

Query: 153 IELLKDMIRQL-LGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILH 211
             +L ++ +++ +     D   +  +G           YL   L++ R+ + LDD+W   
Sbjct: 218 ENILDEIAQKVHISGEKWDTKYKYQKGV----------YLYNFLRKMRFVLFLDDIW--E 265

Query: 212 DWNWINEIAFP-KNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTN 270
             N + EI  P    K   ++V TTR++D+         +  +  L  NDA  L  +K  
Sbjct: 266 KVNLV-EIGVPFPTIKNKCKVVFTTRSLDVCTSMGVEKPM-EVQCLADNDAYDLFQKKVG 323

Query: 271 KNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYEHLPS-ELEI 328
           +    + S+  ++++   +  KC  LPLA+  +   ++ K+ V EW      L S   + 
Sbjct: 324 QI--TLGSDPEIRELSRVVAKKCCGLPLALNVVSETMSCKRTVQEWRHAIYVLNSYAAKF 381

Query: 329 NPSLEALRRMVTLGYNHLPSH-LKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGM 387
           +   + +  ++   Y+ L    +K C LY ++FPED +I++  L+  WI E  +    G+
Sbjct: 382 SGMDDKILPLLKYSYDSLKGEDVKMCLLYCALFPEDAKIRKENLIEYWICEEIIDGSEGI 441

Query: 388 -TTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQENFVLLPMGD 446
              ++ G      L+  S++    V + G    C +HD++R++ + I+            
Sbjct: 442 DKAENQGYEIIGSLVRASLLME-EVELDGANIVC-LHDVVREMALWIA------------ 487

Query: 447 GSDLVQENTRHIAFHGSMSCKTGL---DWSIIRSLAIFGDRPKSLAHAVCPDQLRMLRVL 503
            SDL ++N   I    S+  +  L   +W+++R +++  +   ++AH         L  L
Sbjct: 488 -SDLGKQNEAFIV-RASVGLREILKVENWNVVRRMSLMKN---NIAHLDGRLDCMELTTL 542

Query: 504 DLEDVTF-LITQKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMPSTYIAA 562
            L+      I+ + F+ +  L  L              P  I +L  LQ LN+ ST I  
Sbjct: 543 LLQSTHLEKISSEFFNSMPKLAVLD---LSGNYYLSELPNGISELVSLQYLNLSSTGIRH 599

Query: 563 LPSEISKLQ 571
           LP  + +L+
Sbjct: 600 LPKGLQELK 608
>AT1G63360.1 | chr1:23499515-23502169 REVERSE LENGTH=885
          Length = 884

 Score = 90.1 bits (222), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 152/323 (47%), Gaps = 22/323 (6%)

Query: 119 GKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQG 178
           GKT L  +++      +  F    W+ VSQ FH +E ++D I Q LG    D+  Q+ + 
Sbjct: 184 GKTTLLTQLYNMFNKDKCGFDIGIWVVVSQEFH-VEKVQDEIAQKLGLGG-DEWTQKDKS 241

Query: 179 KVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK-NNKKGSRIVITTRN 237
           +  + ++++       L+EK + + LDD+W   D   + EI  P    KKG ++  TTR+
Sbjct: 242 QKGICLYNI-------LREKSFVLFLDDIWEKVD---LAEIGVPDPRTKKGRKLAFTTRS 291

Query: 238 VDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLP 297
               E CA   + + ++   + + +   L +       + S+  + ++   +  KC  LP
Sbjct: 292 ---QEVCARMGVEHPMEVQCLEENVAFDLFQKKVGQTTLGSDPGIPQLARIVAKKCCGLP 348

Query: 298 LAILTIGAVLATKQ-VSEWEKFYEHLPS-ELEINPSLEALRRMVTLGYNHLPS-HLKPCF 354
           LA+  IG  ++ K+ + EW      L S   E     + +  ++   Y++L    +K   
Sbjct: 349 LALNVIGETMSCKRTIQEWRHAIHVLNSYAAEFIGMEDKVLPLLKYSYDNLKGEQVKSSL 408

Query: 355 LYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGM-TTKDVGESYFNELINRSMIQRSRVGI 413
           LY +++PED +I +  L+  WI E  +    G+   +D G      L+  S++     G 
Sbjct: 409 LYCALYPEDAKILKEDLIEHWICEEIIDGSEGIEKAEDKGYEIIGCLVRASLLMEWDDG- 467

Query: 414 AGKIKTCRIHDIIRDITVSISRQ 436
            G+   C +HD++R++ + I+ +
Sbjct: 468 DGRRAVC-MHDVVREMALWIASE 489
>AT1G62630.1 | chr1:23185912-23188593 FORWARD LENGTH=894
          Length = 893

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/371 (23%), Positives = 172/371 (46%), Gaps = 33/371 (8%)

Query: 119 GKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQG 178
           GKT L  ++F      +  F    W+ VSQ  + +E ++D I Q LG    +   +++  
Sbjct: 184 GKTTLLTQLFNMFNKDKCGFDIGIWVVVSQEVN-VEKIQDEIAQKLGLGGHEWTQRDISQ 242

Query: 179 KVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPK-NNKKGSRIVITTRN 237
           K V    HL  +    LK K++ + LDDLW   D   +  I  P    +KG ++  T+R+
Sbjct: 243 KGV----HLFNF----LKNKKFVLFLDDLW---DKVELANIGVPDPRTQKGCKLAFTSRS 291

Query: 238 VDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLP 297
           +++         +  +  L+ N A  L  +K  +  + + S+  + ++   +  KC  LP
Sbjct: 292 LNVCTSMGDEEPM-EVQCLEENVAFDLFQKKVGQ--KTLGSDPGIPQLARIVAKKCCGLP 348

Query: 298 LAILTIGAVLATKQ-VSEWEKFYEHLPS-ELEINPSLEALRRMVTLGYNHLPS-HLKPCF 354
           LA+  IG  ++ K+ + EW      L S   E     + +  ++   Y++L   H+K   
Sbjct: 349 LALNVIGETMSCKRTIQEWRNAIHVLNSYAAEFIGMEDKILPLLKYSYDNLKGEHVKSSL 408

Query: 355 LYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGM-TTKDVGESYFNELINRSMIQRSRVGI 413
           LY +++PED +I++  L+  WI E  +    G+   +D G      L+  S++    V +
Sbjct: 409 LYCALYPEDAKIRKEDLIEHWICEEIIDGSEGIEKAEDKGYDIIGSLVRASLLMEC-VDL 467

Query: 414 AGKIKTCRIHDIIRDITVSISRQENFVLLPMGDGSDLVQENTRHIAFHGSMSCKTGLDWS 473
            GK  +  +HD++R++ + I+ +     L +   + +V+         G        +W+
Sbjct: 468 KGK-SSVIMHDVVREMALWIASE-----LGIQKEAFIVRAGV------GVREIPKVKNWN 515

Query: 474 IIRSLAIFGDR 484
           ++R +++ G++
Sbjct: 516 VVRRMSLMGNK 526
>AT5G47260.1 | chr5:19189411-19192516 FORWARD LENGTH=949
          Length = 948

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 164/364 (45%), Gaps = 34/364 (9%)

Query: 85  VGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW- 143
           +  + S+ +LL+       D     + + G GG+GKT L  K+       R     +A+ 
Sbjct: 147 IQLTVSQAKLLDTAWARLMDINVGTLGIYGRGGVGKTTLLTKL-------RNKLLVDAFG 199

Query: 144 --ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYF 201
             I V   F  +E ++D I + LG          LQ +   +    +E L   LKEKR+ 
Sbjct: 200 LVIFVVVGFEEVESIQDEIGKRLG----------LQWRRETKERKAAEIL-AVLKEKRFV 248

Query: 202 VVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDA 261
           ++LD +    D   I  + FP  +  G +IV TT++++  ++         +  L   +A
Sbjct: 249 LLLDGIQRELDLEEIG-VPFPSRDN-GCKIVFTTQSLEACDESKWVDAKVEITCLSPEEA 306

Query: 262 ITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ-VSEWEKFYE 320
             L      +N   + S++++ K+   + + C  LPLA+  IG  ++ K+ V EW     
Sbjct: 307 WDLFQETVGEN--TLRSHQDIPKLARVVASTCRGLPLALNLIGEAMSGKRTVREWRYTIH 364

Query: 321 HLPSELEINPSLE--ALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAE 378
            L S     P +E   L  + ++  N     ++ CFLY ++FPE+ +I +  LV  WI E
Sbjct: 365 VLASSTAEFPDMEDGTLPILKSIYDNMSDEIIRLCFLYCALFPENLDIGKEDLVNYWICE 424

Query: 379 GFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQEN 438
           G +  +     +  G     +L+   ++  S     G     ++H ++R++ + I+  E+
Sbjct: 425 GILAKEDREEAEIQGYEIICDLVRMRLLMES-----GNGNCVKMHGMVREMALWIA-SEH 478

Query: 439 FVLL 442
           FV++
Sbjct: 479 FVVV 482
>AT5G41750.1 | chr5:16694047-16697527 FORWARD LENGTH=1069
          Length = 1068

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 134/281 (47%), Gaps = 30/281 (10%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           +VG     KRL  ++   +++   K+I + G  G+GKT ++R +F     I   FP   +
Sbjct: 186 MVGMEAHLKRLNSLLCLESDE--VKMIGIWGPAGIGKTTIARTLFNKISSI---FPFKCF 240

Query: 144 ITVSQSFHRIELLKDMIR---QLLGPSSLD-QLLQELQGKVVVQVHHLSEYLIEELKEKR 199
           +         E LK  I+   +     SL  QLL E+  +  +++HHL   + + L +++
Sbjct: 241 M---------ENLKGSIKGGAEHYSKLSLQKQLLSEILKQENMKIHHLGT-IKQWLHDQK 290

Query: 200 YFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMN 259
             ++LDD+  L     + E   P     GSRI++TT + ++  K      +YH+DF    
Sbjct: 291 VLIILDDVDDLEQLEVLAED--PSWFGSGSRIIVTTEDKNIL-KAHRIQDIYHVDFPSEE 347

Query: 260 DAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFY 319
           +A+ +L     K     +     +++  ++   CG LPL +  +GA L  K  +EWE+  
Sbjct: 348 EALEILCLSAFKQSSIPDG---FEELANKVAELCGNLPLGLCVVGASLRRKSKNEWERLL 404

Query: 320 EHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
             + S L+ N     +  ++ +GY+ L +  +  FL+++ F
Sbjct: 405 SRIESSLDKN-----IDNILRIGYDRLSTEDQSLFLHIACF 440
>AT1G63880.1 | chr1:23712514-23716047 REVERSE LENGTH=1018
          Length = 1017

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 143/315 (45%), Gaps = 60/315 (19%)

Query: 107 AKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWI-TVSQSFH--------RIELLK 157
            K++ + G  G+GKT ++R ++     + K F  + ++  +  S+H        ++ L +
Sbjct: 208 VKIVAIAGPAGIGKTTIARALYGL---LSKRFQLSCFVDNLRGSYHSGFDEYGFKLHLQE 264

Query: 158 DMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWI- 216
             + ++L  S +             ++ HL   + E L ++R  ++LDD+  L     + 
Sbjct: 265 QFLSKVLNQSGM-------------RICHLGA-IKENLSDQRVLIILDDVNKLKQLEALA 310

Query: 217 NEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLL----LRKTNKN 272
           NE  +      GSRIV+TT N +L ++    +  YH+ F    DA+ +L     ++T+  
Sbjct: 311 NETTW---FGPGSRIVVTTENKELLQQHGINN-TYHVGFPSDEDALKILCSYAFKQTSPR 366

Query: 273 HEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSL 332
           H         +++ E +   CG+LPL +  +G+ L  K+  EWE     L + L+     
Sbjct: 367 H-------GFEELSESVTKLCGKLPLGLCVVGSSLRGKKEDEWEDVVTRLETILD----- 414

Query: 333 EALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDV 392
           + +  ++ +GY  L  + +  FL+++IF   F  +   LV    AE  +  K G+     
Sbjct: 415 QDIEDVLRVGYESLDENAQTLFLHIAIF---FNKEDGDLVKTMFAESDLDVKYGLKI--- 468

Query: 393 GESYFNELINRSMIQ 407
                  L NRS+I+
Sbjct: 469 -------LENRSLIK 476
>AT1G64070.1 | chr1:23779949-23783449 FORWARD LENGTH=998
          Length = 997

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 165/356 (46%), Gaps = 46/356 (12%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           +VG     +++  ++D + ++   K++ + G  G+GK+ + R +      +   F    +
Sbjct: 187 MVGIEAHLRKIQSLLDLDNDE--VKMVAISGPAGIGKSTIGRALHSL---LSNRFHHTCF 241

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           +   +  H I L +  ++  L     +QLL ++  +   ++ HL   + E L + + F++
Sbjct: 242 VDNLRGSHPIGLDEYGLKLRLQ----EQLLSKILNQDGSRICHLGA-IKERLCDMKVFII 296

Query: 204 LDDLWILHDWNWINEIAFPKN-NKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAI 262
           LDD+   +D   +  +A   N    GSRI++TT N +L ++    +  Y++ F    +AI
Sbjct: 297 LDDV---NDVKQLEALANESNWFGPGSRIIVTTENKELLKQHGINN-TYYVGFPSDEEAI 352

Query: 263 TLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHL 322
            +L R   +      S    +K+   +   CG+LPL +  +G+ L  K   EWE     L
Sbjct: 353 KILCRYAFRQSS---SRHGFKKLTRSVTELCGKLPLGLRVVGSSLHGKNEEEWEYVIRRL 409

Query: 323 PSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVR 382
             E  I+  +E + R+   GY  L  + +  FL+++IF   F  +   LV   +AE  + 
Sbjct: 410 --ETIIDRDIEQVLRV---GYESLHENEQSLFLHIAIF---FNYEDGDLVKAMLAENDL- 460

Query: 383 PKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQEN 438
                   D+ E   N L+N+S+I    +   G+I   R+H +++     + RQ N
Sbjct: 461 --------DI-EHELNILVNKSLIY---ISTDGRI---RMHKLLQ----LVGRQAN 497
>AT5G38850.1 | chr5:15555187-15558430 FORWARD LENGTH=987
          Length = 986

 Score = 73.2 bits (178), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 146/304 (48%), Gaps = 33/304 (10%)

Query: 107 AKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGP 166
            +++ + G  G+GKT ++R +   +  +  NF  + ++   +    I L +  ++  L  
Sbjct: 199 VRIVGICGPAGIGKTTIARAL---QSLLSSNFQRSCFMENVRGSLNIGLDEYGLKLDLQ- 254

Query: 167 SSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK 226
              ++LL ++  +  +++ HL   + + L +++  ++LDD+  L  +   ++  +     
Sbjct: 255 ---ERLLSKIMNQKGMRIEHLGT-IRDRLHDQKVLIILDDVNDLDLYALADQTTW---FG 307

Query: 227 KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMV 286
            GSRI++TT + +L +K    + VYH+DF    +A+ +  R   +     ++   + K+ 
Sbjct: 308 PGSRIIVTTEDNELLQKHDINN-VYHVDFPSRKEALEIFCRCAFRQSSAPDT---ILKLA 363

Query: 287 ERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHL 346
           ER+   CG LPL +  IG+ L  K   EWE     L  E+ ++   EA  R+   GY+ L
Sbjct: 364 ERVTELCGNLPLGLCVIGSSLHGKTEDEWEILIRRL--EISLDRDNEAQLRV---GYDSL 418

Query: 347 PSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMI 406
             + +  FL +++F   F  K  +LV   + +  +  + G+ T          L N+S+I
Sbjct: 419 HENEQALFLSIAVF---FNYKDRQLVMAMLLDSNLDVEYGLRT----------LANKSLI 465

Query: 407 QRSR 410
             SR
Sbjct: 466 HISR 469
>AT5G41740.2 | chr5:16688687-16692801 FORWARD LENGTH=1115
          Length = 1114

 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 154/338 (45%), Gaps = 50/338 (14%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFP 139
           D   +VG     KRL  ++   +++   K+I + G  G+GKT ++R +F+          
Sbjct: 172 DFEGMVGMEAHLKRLNSLLCLESDE--VKMIGIWGPAGIGKTTIARALFDDR-------- 221

Query: 140 CNAWITVSQSFHRIELLKDMIRQLLGPSSLD-------QLLQELQGKVVVQVHHLSEYLI 192
                 +S SF     + ++   + G +  D       QLL ++  +  +++HHL   + 
Sbjct: 222 ------LSSSFQHKCFMGNLKGSIKGVADHDSKLRLQKQLLSKIFKEENMKIHHLGA-IR 274

Query: 193 EELKEKRYFVVLDDLWILHDWNWI-NEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVY 251
           E L ++R  ++LDD+  L     +  EI++  +   GSRI+ TT +  + +     + +Y
Sbjct: 275 ERLHDQRVLIILDDVDDLKQLEVLAKEISWFGS---GSRIIGTTEDKKILKAHGIHN-IY 330

Query: 252 HLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ 311
            +DF    DA+ +L     K     +     +++  ++   C  LPL +  +GA L  + 
Sbjct: 331 RVDFPSKKDALEILCLSAFKQSSIPD---GFEELANKVAKLCSNLPLGLCVVGASLRGEG 387

Query: 312 VSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRL 371
             EWE+    + S L+ +     +  ++ +GY+ L ++ K  FL+++ F   F   +   
Sbjct: 388 NQEWERLLSRIESSLDRD-----IDDILRIGYDRLLTNDKSLFLHIACF---FNYAKVDN 439

Query: 372 VGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRS 409
           V   +A+         +  DVG   FN L +RS+++ S
Sbjct: 440 VTALLAD---------SNLDVGNG-FNTLADRSLVRIS 467
>AT5G04720.1 | chr5:1360748-1363665 FORWARD LENGTH=812
          Length = 811

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 162/366 (44%), Gaps = 52/366 (14%)

Query: 78  NVDEAEL-VGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRK 136
             D A+L VG    K+++ EM+   + DG  ++I + GM G GKT L++++   EE +R 
Sbjct: 172 TTDGADLGVGLDLGKRKVKEML-FKSIDG-ERLIGISGMSGSGKTTLAKELARDEE-VRG 228

Query: 137 NFPCNA-WITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEEL 195
           +F     ++TVSQS                P+     L+EL+  +   +      +   L
Sbjct: 229 HFGNKVLFLTVSQS----------------PN-----LEELRAHIWGFLTSYEAGVGATL 267

Query: 196 KEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDF 255
            E R  V+LDD+W       ++++ F   N  G+  ++ +R+     K A + + Y ++ 
Sbjct: 268 PESRKLVILDDVWTRES---LDQLMF--ENIPGTTTLVVSRS-----KLADSRVTYDVEL 317

Query: 256 LQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEW 315
           L  ++A  L        ++ +  +   Q +V+++V +C  LPL++  IGA L  +    W
Sbjct: 318 LNEHEATALFCLSV--FNQKLVPSGFSQSLVKQVVGECKGLPLSLKVIGASLKERPEKYW 375

Query: 316 EKFYEHLPSELEINPSLEA-LRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           E   E L      + + E+ +   +     +L    + CFL L  FPED +I  + L+  
Sbjct: 376 EGAVERLSRGEPADETHESRVFAQIEATLENLDPKTRDCFLVLGAFPEDKKIPLDVLINV 435

Query: 375 WIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRI------HDIIRD 428
            +    +             +   +L NR+++   +    G + T         HD++RD
Sbjct: 436 LVELHDLEDATAF-------AVIVDLANRNLLTLVKDPRFGHMYTSYYDIFVTQHDVLRD 488

Query: 429 ITVSIS 434
           + + +S
Sbjct: 489 VALRLS 494
>AT1G63750.3 | chr1:23650940-23655333 FORWARD LENGTH=1132
          Length = 1131

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 152/338 (44%), Gaps = 43/338 (12%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFP 139
           D  +++G     K++  ++  +  D  A +I + G  G+GK+ ++R + ES    R    
Sbjct: 187 DFEDMMGLEAHLKKIQSLLRLDYKD-EALIIGISGPAGIGKSTIARAL-ESRLSDRFQLT 244

Query: 140 CNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQ----VHHLSEYLIEEL 195
           C   +  S++             L       +L ++L  KV+ Q    + HL   L + L
Sbjct: 245 CFMDLRGSEN-----------NGLHDYGQQLRLQEQLLAKVLNQDGTRICHLG-VLQQRL 292

Query: 196 KEKRYFVVLDDLWILHDWNWINEIAFPKN-NKKGSRIVITTRNVDLAEKCATASLVYHLD 254
            + R  ++LDD+    D   +  +A        GSRI++TT N DL ++    S  YH+ 
Sbjct: 293 SDLRVLIILDDV---SDIKQLKALAKETTWFGPGSRIIVTTENKDLLQQRGIDS-TYHVG 348

Query: 255 FLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSE 314
           F    +A+ +  +      E        +K+  RI + CG LPL +  +G+ L  K+  E
Sbjct: 349 FPSREEALEIFCKFA---FEQSSPPHAFEKLAARITHLCGNLPLGLCVMGSSLFGKKQDE 405

Query: 315 WEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           WE F  H    LE NP  E +  ++ +GY  L  + +  FL+++IF   F  +   LV  
Sbjct: 406 WE-FVVH---RLETNPGQE-IDDVLRVGYERLHENDQMLFLHIAIF---FNYRDRDLVEA 457

Query: 375 WIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVG 412
            +A+            DVG ++   LIN+S+I+  R G
Sbjct: 458 MLADD--------GNLDVG-NWLKFLINKSLIEIYRTG 486
>AT1G63870.1 | chr1:23707131-23711901 REVERSE LENGTH=1032
          Length = 1031

 Score = 69.7 bits (169), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 42/286 (14%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           +VG       +  ++D +  DG  K++ + G  G+GKT ++R +   +  +   F    +
Sbjct: 190 MVGLEAHLTEMESLLDLDY-DG-VKMVGISGPAGIGKTTIARAL---QSRLSNKFQLTCF 244

Query: 144 I-TVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFV 202
           +  + +SF  +  L ++  Q       +Q L ++     +++ H S  + E L ++R  +
Sbjct: 245 VDNLKESF--LNSLDELRLQ-------EQFLAKVLNHDGIRICH-SGVIEERLCKQRVLI 294

Query: 203 VLDDLWILHDWNWINEIAFPKNNK----KGSRIVITTRNVDLAEKCATASLVYHLDFLQM 258
           +LDD+      N I ++    N       GSRIV+TT N ++ ++     L YH+ F   
Sbjct: 295 ILDDV------NHIMQLEALANETTWFGSGSRIVVTTENKEILQQHGINDL-YHVGFPSD 347

Query: 259 NDAITLL----LRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSE 314
             A  +L     RKT  +H         +K+  R+   CG LPL +  +G+ L  K   E
Sbjct: 348 EQAFEILCRYAFRKTTLSH-------GFEKLARRVTKLCGNLPLGLRVLGSSLRGKNEEE 400

Query: 315 WEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
           WE+    L + L+     E LR    +GY  L  + +  FL++++F
Sbjct: 401 WEEVIRRLETILDHQDIEEVLR----VGYGSLHENEQSLFLHIAVF 442
>AT4G33300.1 | chr4:16051162-16054005 REVERSE LENGTH=817
          Length = 816

 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 33/271 (12%)

Query: 109 VICVVGMGGLGKTALSRKIFESEEDIRKNFPCNA-WITVSQSFHRIELLKDMIRQLLGPS 167
           V  + GMGG+GKT L++++ + + +++ +F     ++TVSQS   +E L+++I   L   
Sbjct: 202 VFGISGMGGVGKTTLAKEL-QRDHEVQCHFENRILFLTVSQS-PLLEELRELIWGFLSGC 259

Query: 168 SLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKK 227
                     G  V   +             R  V+LDD+W     + +    FP     
Sbjct: 260 E--------AGNPVPDCNF-------PFDGARKLVILDDVWTTQALDRLTSFKFP----- 299

Query: 228 GSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLL-LRKTNKNHEDMESNKNMQKMV 286
           G   ++ +R+     K       Y ++ L  ++AI+L  L    +    +   K++   V
Sbjct: 300 GCTTLVVSRS-----KLTEPKFTYDVEVLSEDEAISLFCLCAFGQKSIPLGFCKDL---V 351

Query: 287 ERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEA-LRRMVTLGYNH 345
           +++ N+C  LPLA+   GA L  K    W+   + L      + S E+ L R +    ++
Sbjct: 352 KQVANECKGLPLALKVTGASLNGKPEMYWKGVLQRLSKGEPADDSHESRLLRQMEASLDN 411

Query: 346 LPSHLKPCFLYLSIFPEDFEIKRNRLVGRWI 376
           L    K CFL L  FPED +I  + L+  WI
Sbjct: 412 LDQTTKDCFLDLGAFPEDRKIPLDVLINIWI 442
>AT1G56540.1 | chr1:21181664-21185306 FORWARD LENGTH=1097
          Length = 1096

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/348 (21%), Positives = 164/348 (47%), Gaps = 36/348 (10%)

Query: 41  EEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDT 100
           E   + +    ++E I+S   D +++         +R+ D   ++G     +++  ++D 
Sbjct: 154 EHFQNWDNEAKMIEKIASDVSDKLNT-------TPSRDFDG--MIGLEAHLRKIESLLDL 204

Query: 101 NANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMI 160
           +  DG AK++ + G  G+GK+ ++R +      + K F  N ++      ++I L++  +
Sbjct: 205 DY-DG-AKIVGISGPAGIGKSTIARALHSV---LSKRFQHNCFMDNLHESYKIGLVEYGL 259

Query: 161 RQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIA 220
           R  L    L ++L  L G   +++ HL   + E L +++  ++LDD+  L   + +  I 
Sbjct: 260 RLRLQEQLLSKILN-LDG---IRIAHLG-VIRERLHDQKVLIILDDVESLDQLDALANIE 314

Query: 221 FPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNK 280
           +      GSR+++TT N ++ ++   +  +YH+ F    +A+ +      +     +   
Sbjct: 315 W---FGPGSRVIVTTENKEILQQHGISD-IYHVGFPSSKEALMIFCLSAFRQLSPPDRFM 370

Query: 281 NMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEA-LRRMV 339
           N+   V ++   CG LPLA+  +G+ L  K  S+W    E LP    +   L+  +  ++
Sbjct: 371 NLAAEVAKL---CGYLPLALHVLGSSLRGKNYSDW---IEELP---RLQTCLDGRIESVL 421

Query: 340 TLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGM 387
            +GY  L    +  FLY+++F   F  +    V   +A+  +  ++G+
Sbjct: 422 KVGYESLHEKDQALFLYIAVF---FNYQHADYVTSMLAKTNLNVRLGL 466
>AT4G14370.1 | chr4:8279946-8283263 REVERSE LENGTH=1009
          Length = 1008

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 175/382 (45%), Gaps = 52/382 (13%)

Query: 64  MDSYAEDIRNQ--SARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKT 121
           ++  + DI N+  S  + D  ++VG     + +  ++D +  DG A ++ + G  G+GKT
Sbjct: 122 IEKISRDISNKLNSTISRDFDDMVGLEAHLEEMKYLLDLDYKDG-AMIVGICGPAGIGKT 180

Query: 122 ALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVV 181
            ++R ++       +       ++ S +    E    +  Q       +QLL ++  +  
Sbjct: 181 TIARALYSLLLSSFQLSCFVENLSGSDNRGLDEYGFKLRLQ-------EQLLSKILNQNG 233

Query: 182 VQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWI-NEIAFPKNNKKGSRIVITTRNVDL 240
           ++++HL   + E L +++  +VLDD+  L     + NE ++      GSRI++TT +  L
Sbjct: 234 MRIYHLGA-IQERLCDQKVLIVLDDVNDLKQLEALANETSW---FGPGSRIIVTTEDKGL 289

Query: 241 AEKCATASLVYHLDFLQMNDAITLL----LRKTNKNHEDMESNKNMQKMVERIVNKCGRL 296
            E+       YH+ F  + +A+ +      RK++            +K+ +R+ N    L
Sbjct: 290 LEQHGINK-TYHVGFPSIEEALEIFCIYAFRKSS-------PPDGFKKLTKRVTNVFDNL 341

Query: 297 PLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLY 356
           PL +  +G+ L  K   EWE   + L + L+ N     +   + +GY+ L    +  FL+
Sbjct: 342 PLGLRVMGSSLRGKGEDEWEALLDRLETSLDRN-----IEGALRVGYDSLQEEEQALFLH 396

Query: 357 LSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGK 416
           +++F   F   ++  V   +A+  +  K G+            L N+S++ RS    +GK
Sbjct: 397 IAVF---FNYNKDEHVIAMLADSNLDVKQGLKI----------LTNKSLVYRS---TSGK 440

Query: 417 IKTCRIHDIIRDI-TVSISRQE 437
           I    +H +++ +   +I RQE
Sbjct: 441 IV---MHKLLQQVGRKAIQRQE 459
>AT5G58120.1 | chr5:23517492-23520927 FORWARD LENGTH=1047
          Length = 1046

 Score = 66.2 bits (160), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/356 (21%), Positives = 160/356 (44%), Gaps = 45/356 (12%)

Query: 64  MDSYAEDIRNQSARNV--DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKT 121
           ++  A D+ N+    +  D  ++VG     +++  ++  +  DG A ++ + G  G+GKT
Sbjct: 166 IEKIARDVSNKLNATISWDFEDMVGIEAHLQKMQSLLHLDYEDG-AMIVGIYGPAGIGKT 224

Query: 122 ALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVV 181
            ++R +      +  +F    ++   +  +   L +  ++  L     +QLL ++     
Sbjct: 225 TIARAL---HSRLSSSFQLTCFMENIRGSYNSGLDEYGLKLRLQ----EQLLSKVLNHDG 277

Query: 182 VQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKN-NKKGSRIVITTRNVDL 240
           ++++HL   + E L +++  ++LDD+    D   +  +A   N    GSRI++TT + +L
Sbjct: 278 IRINHLGA-IPERLCDQKVLIILDDV---DDLQQLEALANETNWFGPGSRIIVTTEDQEL 333

Query: 241 AEKCATASLVYHLDFLQMNDAI----TLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRL 296
            E+    +  YH+DF    +A     T   R++   +         +K+ ER+   C  L
Sbjct: 334 LEQ-HDVNKKYHVDFPTREEACKIFCTYAFRRSFAPY-------GFEKLAERVTWLCSNL 385

Query: 297 PLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLY 356
           PL +  +G+ L  K+  +WE     L + L+       +  ++ +GY+HL    +  +L 
Sbjct: 386 PLGLRVMGSTLRGKKEDDWEGILRRLENSLD-----RKIDGVLRVGYDHLCEDDQFLYLL 440

Query: 357 LSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVG 412
           ++ F   F    +  V   + E  +  K+G+ T          L  +S+IQ S  G
Sbjct: 441 IAFF---FNYVDDDHVKAMLVEDNLDVKLGLKT----------LAYKSLIQISAEG 483
>AT1G27170.1 | chr1:9434718-9439219 FORWARD LENGTH=1385
          Length = 1384

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 60/309 (19%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           +VG     K L  +IDT ++ G  +V+ + GMGG+GKT L++  +     I  NF   A+
Sbjct: 189 IVGLESPLKDLTGLIDTESSSG-VQVLGLYGMGGIGKTTLAKAFYNK---IVGNFEQRAF 244

Query: 144 IT-----VSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLS---EYLIEEL 195
           I+      S     + L K +I++L               ++V ++  +S   E +   +
Sbjct: 245 ISDIRERSSAENGLVTLQKTLIKELF--------------RLVPEIEDVSIGLEKIKANV 290

Query: 196 KEKRYFVVLDDL-------WILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATAS 248
            EK+  VVLDD+        ++ +  W  +         G+ IVITTR+ ++  K +   
Sbjct: 291 HEKKIIVVLDDVDHIDQVHALVGETRWYGQ---------GTLIVITTRDSEILSKLSVNQ 341

Query: 249 LVYHLDFLQMNDAITLL----LRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIG 304
             Y +  L    A+ L     LRK        E  KN+  + ++IV   G LPLA+   G
Sbjct: 342 -QYEVKCLTEPQALKLFSYHSLRKE-------EPTKNLLALSKKIVQISGLLPLAVEVFG 393

Query: 305 AVLA-TKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPED 363
           ++L   K+  +W+   + L      N     L+ ++ L +  L    K  FL ++     
Sbjct: 394 SLLYDKKEEKDWQTQLDKLKKTQPGN-----LQDVLELSFKSLDDEEKKVFLDIACLFLK 448

Query: 364 FEIKRNRLV 372
            EIK++ +V
Sbjct: 449 MEIKKDEVV 457
>AT1G56510.1 | chr1:21167704-21172260 FORWARD LENGTH=1008
          Length = 1007

 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 131/293 (44%), Gaps = 47/293 (16%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKN-- 137
           D  ++VG     K ++ ++D +      K++ + G  G+GK+ +++ +        ++  
Sbjct: 182 DFDDMVGLERHLKEMVSLLDLDKEG--VKMVGISGPAGIGKSTIAKALHSRHSSTFQHNC 239

Query: 138 FPCNAW----ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIE 193
           F  N W    I   +   ++ L +  + ++L  + L             ++ HLS  + +
Sbjct: 240 FVDNLWENYKICTGEHGVKLRLHEQFVSKILKQNGL-------------ELTHLS-VIKD 285

Query: 194 ELKEKRYFVVLDD------LWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATA 247
            L++K+  ++LDD      L  L D  W            GSR+++TT N ++ ++    
Sbjct: 286 RLQDKKVLIILDDVESLAQLETLADMTWFG---------PGSRVIVTTENKEILQQHGIG 336

Query: 248 SLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVL 307
             +Y + +   ++A+T+      K     +   ++   V RI   C +LPLA+  +G+ L
Sbjct: 337 D-IYQVGYPSESEALTIFCLSAFKQASPPDGFMDLADEVVRI---CDKLPLALCVLGSSL 392

Query: 308 ATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
             K  ++WE   + LP    +   L+ +  ++ +G+  L    +  FLY+++F
Sbjct: 393 LRKSQTDWE---DELP---RLRNCLDGIESVLKVGFESLNEKDQALFLYITVF 439
>AT1G27180.1 | chr1:9439859-9445818 FORWARD LENGTH=1557
          Length = 1556

 Score = 63.2 bits (152), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 79/375 (21%)

Query: 85  VGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWI 144
           VG     K L+++ +T ++ G  +V+ + GMGG+GKT L++  +               I
Sbjct: 363 VGLESPIKDLMKLFNTESSSG-IQVMGLYGMGGIGKTTLAKAFYNK-------------I 408

Query: 145 TVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLS----------EYLIEE 194
            V+ + HR+      I  + G SS    L  LQ  ++ ++  L           E + E 
Sbjct: 409 IVNFNRHRV-----FIESVRGKSSDQDGLVNLQKTLIKELFRLVPEIEDVSIGLEKIKEN 463

Query: 195 LKEKRYFVVLDDL-------WILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATA 247
           + EK+  VVLDD+        ++ + +W  E         GS IVITTR+ ++  K +  
Sbjct: 464 VHEKKIIVVLDDVDHIDQVNALVGETSWYGE---------GSLIVITTRDSEILSKLSVN 514

Query: 248 SLVYHLDFLQMNDAITLL----LRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTI 303
              Y +  L    A+ L     LRK      +    + + ++ ++I    G LPLA+   
Sbjct: 515 Q-QYEVKCLTEPQALKLFSFYSLRK------EKPPTQGLLELSKKIAEVTGLLPLAVKVF 567

Query: 304 GAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPED 363
           G+    K  +EW+   E L ++       + L  ++ L +  L    K  FL ++     
Sbjct: 568 GSHFYDKDENEWQVELEKLKTQ------QDKLHGVLALSFKSLDEEEKKIFLDIACLFLK 621

Query: 364 FEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIH 423
            +I +  +V   I +G      G+           E   R +IQ+S + I     T  +H
Sbjct: 622 MDITKEEVVD--ILKG-----CGLNA---------EAALRVLIQKSLLTILTD-DTLWMH 664

Query: 424 DIIRDITVSISRQEN 438
           D IRD+   +  +E+
Sbjct: 665 DQIRDMGRQMVHKES 679
>AT5G45250.1 | chr5:18321914-18326022 REVERSE LENGTH=1218
          Length = 1217

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 28/282 (9%)

Query: 83  ELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNA 142
           E  G     K L E +D +   G  ++I VVGM G+GKT L +++++             
Sbjct: 206 ETFGNEQRLKDLEEKLDRDKYKG-TRIIGVVGMPGIGKTTLLKELYK------------- 251

Query: 143 WITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIE---ELKEKR 199
             T    F R  L+ D IR       LD+L Q L G++    H   + L +   +L E++
Sbjct: 252 --TWQGKFSRHALI-DQIRVKSKHLELDRLPQMLLGELSKLNHPHVDNLKDPYSQLHERK 308

Query: 200 YFVVLDDLWILHDWNWINEI-AFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQM 258
             VVLDD+      + + EI  + K  K+GSR+VI T ++ L          Y +  L  
Sbjct: 309 VLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIATSDMSLTN--GLVDDTYMVQNLNH 366

Query: 259 NDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKF 318
            D++ L       + +     K+  K+ E  V+     PLA+  +G  L  K +  W   
Sbjct: 367 RDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSMDHWNSK 426

Query: 319 YEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
            + L      N     +  +  + Y+ L +  K  FL ++ F
Sbjct: 427 MKKLAQSPSPN-----IVSVFQVSYDELTTAQKDAFLDIACF 463
>AT5G18350.1 | chr5:6074069-6078569 REVERSE LENGTH=1246
          Length = 1245

 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 179/433 (41%), Gaps = 85/433 (19%)

Query: 56  ISSGTEDDMDSYAEDIRNQ----SARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVIC 111
           I S   D +D  AED+ ++     +R+ D    +G    K + L  +++    G  ++I 
Sbjct: 163 IWSKESDLIDKIAEDVLDELNYTMSRDFDGYVGIGRHMRKMKSLLCLES----GDVRMIG 218

Query: 112 VVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLD- 170
           +VG  G+GKT ++R +    + I +NF   A+I         ++     R+  G S L  
Sbjct: 219 IVGPPGIGKTTIARAL---RDQISENFQLTAFID--------DIRLTYPRRCYGESGLKP 267

Query: 171 --QLLQELQGKVVVQVHHLSEYLIEE-------------LKEKRYFVVLDDLWILHDWNW 215
               + + + K+V+Q + LSE L ++             LK+++  V+LDD+  L   + 
Sbjct: 268 PTAFMNDDRRKIVLQTNFLSEILNQKDIVIHNLNAAPNWLKDRKVLVILDDVDHLEQLD- 326

Query: 216 INEIAFPKNNK---KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKT--- 269
               A  K       GSRI+ITT++  L  K      +Y +   + +DA+ +        
Sbjct: 327 ----AMAKETGWFGYGSRIIITTQDRKLL-KAHNIDYIYEVGLPRKDDALQIFCLSAFGQ 381

Query: 270 NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEIN 329
           N  H+D       Q +   +    G LPL +  +G+ L    + EW+     L + L+ +
Sbjct: 382 NFPHDDF------QYLACEVTQLAGELPLGLKVLGSYLKGMSLEEWKNALPRLKTCLDGD 435

Query: 330 PSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTT 389
                + + +   Y+ L    +  FL+++     +E+            G V+  +G + 
Sbjct: 436 -----IEKTLRYSYDALSRKDQALFLHIACLFRGYEV------------GHVKQWLGKSD 478

Query: 390 KDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISR-------QENFVLL 442
            DV             + R +  I+  +    +H +++ + V I R       +E   L+
Sbjct: 479 LDVDHGL--------DVLRQKSLISIDMGFLNMHSLLQQLGVEIVRNQSSQEPRERQFLV 530

Query: 443 PMGDGSDLVQENT 455
            + D SD+   NT
Sbjct: 531 DVNDISDVFTYNT 543
>AT1G63740.1 | chr1:23645525-23648807 FORWARD LENGTH=993
          Length = 992

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 134/302 (44%), Gaps = 52/302 (17%)

Query: 64  MDSYAEDIRNQSARNV--DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKT 121
           M+  A DI N+    +  D  ++VG     +++  ++  + ND  A ++ + G  G+GKT
Sbjct: 122 MEKIARDISNKVNTTISRDFEDMVGVETHLEKIQSLLHLD-NDDEAMIVGIYGPAGIGKT 180

Query: 122 ALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGP--SSLDQL------- 172
            ++R +     D R    C                   +  L G   SSLD+        
Sbjct: 181 TIARALHSLLSD-RFQLTC------------------FMENLRGSYNSSLDEYGLKLQLQ 221

Query: 173 ---LQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKK-- 227
              L ++  +  ++V++LS  +   L +++  ++LDD   + D   +  +A   N  K  
Sbjct: 222 EQLLSKILNQTGMRVYNLSA-IQGMLCDQKVLIILDD---VDDLKQLEALA---NETKWF 274

Query: 228 --GSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKM 285
             GSR+V+TT N +L ++       Y++DF    +A  +  R   K     +  +N+   
Sbjct: 275 GPGSRVVVTTENQELLKQHDDIKNTYYVDFPTQKEARQIFCRYGFKQSTPQDGFENLS-- 332

Query: 286 VERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELE-INPSLEALRRMVTLGYN 344
            ER++  C +LPL +  +G  L  K   +WE     L S  + ++ ++E   R++ +GY+
Sbjct: 333 -ERVIKLCSKLPLGLSVMGLYLRKKTEDDWEDILHRLESSFDSVDRNIE---RVLRVGYD 388

Query: 345 HL 346
            L
Sbjct: 389 GL 390
>AT5G41550.1 | chr5:16617232-16620785 REVERSE LENGTH=1086
          Length = 1085

 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 139/290 (47%), Gaps = 37/290 (12%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFP 139
           D   +VG      +L  ++    +D   K+I + G  G+GK+ ++R ++     +  +F 
Sbjct: 182 DFEGMVGLEAHLTKLNSLLCFEGDD--VKMIGIWGPAGIGKSTIARALYN---QLSSSFQ 236

Query: 140 CNAWITVSQSFHRIELLKDMIRQLLG------PSSLDQLL-QELQGKVVVQVHHLSEYLI 192
              ++           LK  ++ ++G        SL +LL  ++  +  ++VH+L+  + 
Sbjct: 237 LKCFMGN---------LKGSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHNLAA-IK 286

Query: 193 EELKEKRYFVVLDDLWILHDWNWI-NEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVY 251
           E L+++R  ++LDD+  L     +  E+++  +   GSRI++ T +  + ++      +Y
Sbjct: 287 EWLQDQRVLIILDDVDDLEQLEVLAKELSWFGS---GSRIIVATEDKKILKEHGIND-IY 342

Query: 252 HLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ 311
           H+DF  M +A+ +L     K     +     +++ +++V+ CG LPL +  +G+ L  + 
Sbjct: 343 HVDFPSMEEALEILCLSAFKQSSVPD---GFEELAKKVVHLCGNLPLGLSIVGSSLRGES 399

Query: 312 VSEWEKFYEHLPSELEINPSLEA-LRRMVTLGYNHLPSHLKPCFLYLSIF 360
             EWE     LP    I  SL+  +  ++ +GY  L    +  FL+++ F
Sbjct: 400 KHEWEL---QLP---RIEASLDGKIESILKVGYERLSKKNQSLFLHIACF 443
>AT3G04220.1 | chr3:1109118-1112188 REVERSE LENGTH=868
          Length = 867

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 140/323 (43%), Gaps = 35/323 (10%)

Query: 58  SGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGG 117
           SG  + + S   ++ N S  + D  +L+G  D  +++  ++D ++++   K I + G  G
Sbjct: 211 SGMIEKIVSDISEMLNHSTPSRDFDDLIGMGDHMEKMKPLLDIDSDE--MKTIGIWGPPG 268

Query: 118 LGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQ 177
           +GKT ++R ++    D    F  + ++   ++ + I    D   + L      + L ++ 
Sbjct: 269 VGKTTIARSLYNQHSD---KFQLSVFMESIKTAYTIPACSDDYYEKLQLQQ--RFLSQIT 323

Query: 178 GKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---KGSRIVIT 234
            +  VQ+ HL     E L +K+  VV+DD+        +   A  K N     GSRI+IT
Sbjct: 324 NQENVQIPHLG-VAQERLNDKKVLVVIDDVN-----QSVQVDALAKENDWLGPGSRIIIT 377

Query: 235 TRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCG 294
           T++  +  +      +Y +D+    +A+ +            +     +++ +++    G
Sbjct: 378 TQDRGIL-RAHGIEHIYEVDYPNYEEALQIFCMHAFGQKSPYDG---FEELAQQVTTLSG 433

Query: 295 RLPLAILTIGAVLATKQVSEWE----KFYEHLPSELEINPSLEALRRMVTLGYNHLPSHL 350
           RLPL +  +G+        EW     +   HL  ++E          ++ L Y+ L    
Sbjct: 434 RLPLGLKVMGSYFRGMTKQEWTMALPRVRTHLDGKIE---------SILKLSYDALCDVD 484

Query: 351 KPCFLYL--SIFPEDFEIKRNRL 371
           K  FL+L  S   +D E+   +L
Sbjct: 485 KSLFLHLACSFHNDDTELVEQQL 507
>AT5G36930.2 | chr5:14567771-14571916 REVERSE LENGTH=1192
          Length = 1191

 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 154/340 (45%), Gaps = 53/340 (15%)

Query: 102 ANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIR 161
            +DG  +VI + GMGG+GKT L++  F            N +  + +    +E  ++  +
Sbjct: 208 GSDG-VRVIVIYGMGGIGKTTLAKVAF------------NEFSHLFEGSSFLENFREYSK 254

Query: 162 QLLGPSSLD-QLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIA 220
           +  G + L  QLL ++  +  ++   L   + E  + KR  +V+DD+  +H    +N  A
Sbjct: 255 KPEGRTHLQHQLLSDILRRNDIEFKGLDHAVKERFRSKRVLLVVDDVDDVHQ---LNSAA 311

Query: 221 FPKNN-KKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESN 279
             ++    GSRI+ITTRN+ L ++   A   Y    L  ++++ L      +     E  
Sbjct: 312 IDRDCFGHGSRIIITTRNMHLLKQ-LRAEGSYSPKELDGDESLELFSWHAFRTS---EPP 367

Query: 280 KNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWE---KFYEHLPSELEINPSLEALR 336
           K   +  E +V  C  LPLA+  +GA L  + + EWE   K  + +P     N +++A  
Sbjct: 368 KEFLQHSEEVVTYCAGLPLAVEVLGAFLIERSIREWESTLKLLKRIP-----NDNIQA-- 420

Query: 337 RMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESY 396
             + + +N L    K  FL ++ F           +G  +   +V   +       G + 
Sbjct: 421 -KLQISFNALTIEQKDVFLDIACF----------FIG--VDSYYVACILD------GCNL 461

Query: 397 FNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQ 436
           + +++   +++R  + I+G      +HD++RD+   I R+
Sbjct: 462 YPDIVLSLLMERCLITISG--NNIMMHDLLRDMGRQIVRE 499
>AT2G16870.1 | chr2:7308077-7311686 REVERSE LENGTH=1110
          Length = 1109

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/403 (21%), Positives = 177/403 (43%), Gaps = 72/403 (17%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSR--------KIFESE---E 132
           +VG     K +  ++D +  DG  K++ + G  G+GKT ++R        K F+     +
Sbjct: 185 MVGIEAHLKEMEVLLDFDY-DG-VKIVGIFGPAGIGKTTIARALHSLLLFKKFQLTCFVD 242

Query: 133 DIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLI 192
           ++R ++P    I + +   ++ L + ++ ++L    +             ++ HL   + 
Sbjct: 243 NLRGSYP----IGIDEYGLKLRLQEHLLSKILNQDGM-------------RISHLGA-VK 284

Query: 193 EELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKK----GSRIVITTRNVDLAEKCATAS 248
           E L + +  ++LDD+      N + ++    N+      GSR+++TT N ++ ++    +
Sbjct: 285 ERLCDMKVLIILDDV------NDVKQLEALANDTTWFGPGSRVIVTTENKEILQRHGIDN 338

Query: 249 LVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLA 308
           + YH+ F     A+ +L     K             + +++   CG LPL +  +G+ L 
Sbjct: 339 M-YHVGFPSDEKAMEILCGYAFKQSS---PRPGFNYLAQKVTWLCGNLPLGLRVVGSSLR 394

Query: 309 TKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKR 368
            K+  EW+     L +   I+  +E + R   +GY  L  + +  FL++++F   F  K 
Sbjct: 395 GKKEDEWKSVIRRLDT--IIDRDIEDVLR---VGYESLHENEQSLFLHIAVF---FNCKD 446

Query: 369 NRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRD 428
             LV   +A+  +    G+            L+N+S+I  S  G        R+H +++ 
Sbjct: 447 VDLVKAMLADDNLDIAHGLKI----------LVNKSLIYISTTG------EIRMHKLLQQ 490

Query: 429 IT-VSISRQENFVLLPMGDGSDL--VQENTRHIAFHGSMSCKT 468
           +   +I+RQE +  L + +  ++  V EN +       +S  T
Sbjct: 491 VGRQAINRQEPWKRLILTNAQEICYVLENDKGTGVVSGISFDT 533
>AT3G51570.1 | chr3:19126358-19130456 FORWARD LENGTH=1227
          Length = 1226

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 49/311 (15%)

Query: 65  DSYAEDIRNQS-ARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTAL 123
           D++    +N S +   ++ E+ G     + L E +D +  +   +++ VVGM G+GKT L
Sbjct: 189 DAFVYHSKNNSMSVGREKHEIYGLKQRLEELKEKLDLDCEE--TRILGVVGMPGIGKTTL 246

Query: 124 SRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQL----LQELQGK 179
           +R+I+E               T+   F R  L++D IR+      LD L    L+EL G 
Sbjct: 247 AREIYE---------------TLRCKFLRHGLIQD-IRRTSKEHGLDCLPALLLEELLGV 290

Query: 180 VVVQVHHLS---EYLIEELKEKRYFVVLDDLW-------ILHDWNWINEIAFPKNNKKGS 229
            +  +       E    EL   +  VVLDD+        +L   NWI         ++GS
Sbjct: 291 TIPDIESTRCAYESYKMELHTHKVLVVLDDVSDKEQIDVLLGRCNWI---------RQGS 341

Query: 230 RIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERI 289
           RIVI T +  L +    A   Y +  L   D +    R     H ++ +N+ + K+ +  
Sbjct: 342 RIVIATSDKSLIQD--VADYTYVVPQLNHKDGLGHFGRYAFDRHSNIHNNEVIMKLSKEF 399

Query: 290 VNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSH 349
           V+     PL +  +GA L  K    W+     L        S  ++R ++ + Y+ L   
Sbjct: 400 VHYGRGHPLVLKLLGADLNGKDEDHWKTKLATLAEN-----SSHSIRDVLQVSYDELSQV 454

Query: 350 LKPCFLYLSIF 360
            K  FL ++ F
Sbjct: 455 HKDIFLDIACF 465
>AT1G33560.1 | chr1:12169092-12171878 FORWARD LENGTH=788
          Length = 787

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 141/329 (42%), Gaps = 50/329 (15%)

Query: 112 VVGMGGLGKTALSRKIFESEEDIRKNFPCNA-WITVSQSFHRIELLKDMIRQLLGPSSLD 170
           + GM G GKT L+ ++   ++D+R  F     ++TVS+S    E L+  IR+ L      
Sbjct: 191 ISGMSGSGKTTLAIEL-SKDDDVRGLFKNKVLFLTVSRS-PNFENLESCIREFLYDG--- 245

Query: 171 QLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSR 230
                        VH            +R  V+LDD+W     + +       +  +GS 
Sbjct: 246 -------------VH------------QRKLVILDDVWTRESLDRL------MSKIRGST 274

Query: 231 IVITTRNVDLAEKCATASLVYHLDFLQMNDAITLL-LRKTNKNHEDMESNKNMQKMVERI 289
            ++ +R+     K A     Y+++ L+ ++A++LL L    +       NK    +V+++
Sbjct: 275 TLVVSRS-----KLADPRTTYNVELLKKDEAMSLLCLCAFEQKSPPSPFNK---YLVKQV 326

Query: 290 VNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEA-LRRMVTLGYNHLPS 348
           V++C  LPL++  +GA L  K    WE   + L      + + E+ +   +     +L  
Sbjct: 327 VDECKGLPLSLKVLGASLKNKPERYWEGVVKRLLRGEAADETHESRVFAHMEESLENLDP 386

Query: 349 HLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMT-TKDVGESYFNELINRSMIQ 407
            ++ CFL +  FPED +I  + L   W+    +  +   +    + +     ++N     
Sbjct: 387 KIRDCFLDMGAFPEDKKIPLDLLTSVWVERHDIDEETAFSFVLRLADKNLLTIVNNPRFG 446

Query: 408 RSRVGIAGKIKTCRIHDIIRDITVSISRQ 436
              +G      T   HD++RD+ + +S +
Sbjct: 447 DVHIGYYDVFVT--QHDVLRDLALHMSNR 473
>AT3G15700.1 | chr3:5321136-5322376 REVERSE LENGTH=376
          Length = 375

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 36/281 (12%)

Query: 40  VEEVSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMID 99
           V+E+ SR T   +VE    G+   M S           NVD  +     ++   L+    
Sbjct: 107 VQEIKSRGTFDVVVENSGIGSGSMMIS-----------NVDRDDQTVGLEAVSGLVWRCM 155

Query: 100 TNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKN-FPCNAWITVSQSFHRIELLKD 158
           T  N G   +I + G+ G+GKT +  ++       + N F    W+ VS++ + +E ++D
Sbjct: 156 TVDNTG---IIGLYGVEGVGKTTVLTQVNNRLLQHKLNGFDFVIWVFVSKNVN-LEKIQD 211

Query: 159 MIRQLLG---PSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNW 215
            IR+ +G    S + +  +E  GK+            E L ++R+ + LDD+W   D   
Sbjct: 212 TIREKIGFLDRSWMSKTEEEKAGKI-----------FEILSKRRFALFLDDVWEKVDL-- 258

Query: 216 INEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHED 275
           +     P +    S+IV TT + ++ ++    + +  ++ L    A  L   K N   E 
Sbjct: 259 VKAGVPPPDGLNRSKIVFTTCSDEVCQEMGAQTKI-KMEKLPWERAWDLF--KMNAGEEI 315

Query: 276 MESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQV-SEW 315
           ++S+ ++ K+ + +  KC  LPLA++TIG  +A+K+   EW
Sbjct: 316 VKSHPDITKVAQEVAAKCDGLPLALVTIGRAMASKKTPQEW 356
>AT1G66090.1 | chr1:24602221-24604573 FORWARD LENGTH=430
          Length = 429

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/274 (20%), Positives = 119/274 (43%), Gaps = 41/274 (14%)

Query: 43  VSSRNTRYNLVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNA 102
           V  R+   N++E I++   + +++           + D  E+VG      ++  ++  + 
Sbjct: 167 VQDRDDEANMIEKIATDVSEKLNA---------TESKDFDEMVGIKAHLTKIESLLSLDY 217

Query: 103 NDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQ 162
           +    K++ + G  G+GK+ ++R +                  +S SFH    ++++I Q
Sbjct: 218 D--KVKIVGISGPAGIGKSTIARALHN---------------LLSSSFHLSCFMENLISQ 260

Query: 163 LLGPSSLD---------QLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDW 213
               SSL+         QLL ++  +  +++ HL   + E L ++R  ++LDD+  L   
Sbjct: 261 SNPHSSLEYSSKLSLQEQLLSQVLNEKDIRIRHLGA-IQERLHDQRVLIILDDVTSLEQL 319

Query: 214 NWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNH 273
             +  I   K    GSRI++ T+  D+  +      +YH+ F    DA+ +      +  
Sbjct: 320 EVLANI---KWYGPGSRIIVITKKKDILVQHGICD-IYHVGFPTDADALKIFCLSAYRQT 375

Query: 274 EDMESNKNMQKMVERIVNKCGRLPLAILTIGAVL 307
              + +  + +  E  +  CG LPL +  +G+ L
Sbjct: 376 SPPDGSMKIHE-CEMFIKICGNLPLHLHVLGSAL 408
>AT3G44670.1 | chr3:16217242-16221425 FORWARD LENGTH=1220
          Length = 1219

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 167/398 (41%), Gaps = 51/398 (12%)

Query: 45  SRNTR--YNLVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNA 102
           SRN R   +++E I++   + ++S+        +R+ D   LVG       L +++  + 
Sbjct: 235 SRNWRNEADMIEKIATDVSNMLNSFT------PSRDFDG--LVGMRAHMDMLEQLLRLDL 286

Query: 103 NDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQ 162
           ++   ++I + G  G+GKT ++R +F    D    F  +A I   +  +      +   Q
Sbjct: 287 DE--VRMIGIWGPPGIGKTTIARFLFNQVSD---RFQLSAIIVNIRGIYPRPCFDEYSAQ 341

Query: 163 LLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFP 222
           L      +Q+L ++     + + HL     E L++K+ F+VLD++  L   +     A  
Sbjct: 342 L---QLQNQMLSQMINHKDIMISHLG-VAQERLRDKKVFLVLDEVDQLGQLD-----ALA 392

Query: 223 KNNK---KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESN 279
           K  +    GSRI+ITT ++ +  K    + VY + +   ++A  +         +  E  
Sbjct: 393 KETRWFGPGSRIIITTEDLGVL-KAHGINHVYKVKYPSNDEAFQIFCMNAFGQKQPHEG- 450

Query: 280 KNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMV 339
               ++   ++   G LPL +  +G+ L  K   EWE+    L + L+ N     +  ++
Sbjct: 451 --FDEIAWEVMALAGELPLGLKVLGSALRGKSKPEWERTLPRLKTSLDGN-----IGSII 503

Query: 340 TLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNE 399
              Y+ L    K   LY++     F  +    V   +A  F+  K G+            
Sbjct: 504 QFSYDGLCDEDKYLLLYIACL---FNYESTTKVEEVLANKFLDVKQGLHV---------- 550

Query: 400 LINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQE 437
           L  +S+I      + G   T  +H ++R      SR++
Sbjct: 551 LAQKSLISIDENSLYG--DTINMHTLLRQFGRETSRKQ 586
>AT5G18370.1 | chr5:6085036-6088926 REVERSE LENGTH=1211
          Length = 1210

 Score = 57.4 bits (137), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 86/393 (21%), Positives = 169/393 (43%), Gaps = 54/393 (13%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFE--SEEDIRKN 137
           D  + VG      R+  ++   ++D   ++I ++G  G+GKT ++R +++  SE+     
Sbjct: 230 DFDDYVGIRPHITRINSLLCLESSD--VRMIGILGPPGIGKTTIARVLYDQISEKFQFSA 287

Query: 138 FPCNAWITVSQSFHRIELLKDMIRQLLGPSSLD-----QLLQELQGKVVVQVHHLSEYLI 192
           F  N  ++  + +H    L   +  + G          +LL EL  +  +QV HL   + 
Sbjct: 288 FIENIRLSYWKGWHDEGNLDFPVEIMTGDRQRKLNLQRRLLSELFNQKDIQVRHLGA-VQ 346

Query: 193 EELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---KGSRIVITTRNVDLAEKCATASL 249
           E L++ +  V+LD +  L         A  K  +    GSRI+ITT++  L  +    + 
Sbjct: 347 ERLRDHKVLVILDGVDQLEQLT-----ALAKETQWFGYGSRIIITTQDQRLL-RAHEINH 400

Query: 250 VYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLAT 309
           VY +D    ++A+ +            +  K   K+        G LPL +  +G+ L  
Sbjct: 401 VYKVDLPATDEALQIFCLYAFGQKFPYDGFK---KLAREFTALAGELPLGLRVLGSYLRG 457

Query: 310 KQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRN 369
             + EW+     L + L+       + + +   YN L    K  FL+++      ++   
Sbjct: 458 MSLEEWKNALPRLRTSLD-----GEIEKTLRFAYNVLSDKDKSLFLHIACLFNGCQVNH- 511

Query: 370 RLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDI 429
             V +W+A          ++ DV    F  L N+S+I  + +G+       R+H +++ +
Sbjct: 512 --VKQWLAN---------SSLDVNHG-FEVLSNKSLIS-TDMGLV------RMHSLLQQL 552

Query: 430 TVSISRQENF-------VLLPMGDGSDLVQENT 455
            V I R+++         L+ + + SD++ +NT
Sbjct: 553 GVDIVRKQSIGEPEKRQFLVDVNEISDVITDNT 585
>AT3G04210.1 | chr3:1106243-1108005 REVERSE LENGTH=532
          Length = 531

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 39/255 (15%)

Query: 73  NQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEE 132
           N S  + D ++LVG  D  K+L  M+  + ND   ++I + G  G+GKT+++R +F    
Sbjct: 229 NISTPSSDFSDLVGMEDHMKKLERMLYLDLND--VRMIGIWGPPGIGKTSIARVLFRKHS 286

Query: 133 DIRKNFPCNAWITVSQSFHRIEL-----LKDMIRQLLGPSSLDQLLQELQGKVVVQVHHL 187
           D   +F  + ++   + + R        LK  ++Q        Q L ++  +  V+V HL
Sbjct: 287 D---SFDLSVFMETVKGYTRPGCSDEHGLKLHLQQ--------QFLSQIFNQKDVEVPHL 335

Query: 188 SEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---KGSRIVITTRNVDLAEKC 244
              + + L++KR  VVLDD+    D +   E A  K NK    GSRI+ITT++  L  K 
Sbjct: 336 G-VVQDRLRDKRVLVVLDDV----DQSAQLE-AMAKENKWFGPGSRIIITTQDRRLL-KA 388

Query: 245 ATASLVYHLDFLQMNDAITLL----LRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAI 300
                VY +D    +DA  +       KT+  H         +++        G  P  I
Sbjct: 389 HGIKDVYKVDLPPPDDAFQIFCMYAFGKTSPKH-------GFEELAWEATYLSGIHPSGI 441

Query: 301 LTIGAVLATKQVSEW 315
            ++G+        EW
Sbjct: 442 KSMGSYFRKMSKPEW 456
>AT4G11170.1 | chr4:6811127-6817130 FORWARD LENGTH=1096
          Length = 1095

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 151/347 (43%), Gaps = 66/347 (19%)

Query: 107 AKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGP 166
            +++ + G  G+GKT ++R ++       +NF              + +  + +R+  G 
Sbjct: 205 VRIVGIWGPAGVGKTTIARALYN---QYHENF-------------NLSIFMENVRESYGE 248

Query: 167 SSLD----------QLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWI 216
           + LD          + L +L  +  ++V HL   + E LK ++  ++LDD+      + I
Sbjct: 249 AGLDDYGLKLHLQQRFLSKLLDQKDLRVRHLGA-IEERLKSQKVLIILDDV------DNI 301

Query: 217 NEI-AFPKNNK---KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKN 272
            ++ A  K N+     SRIV+TT+N  L       + +Y + +    +A+T+  +   K 
Sbjct: 302 EQLKALAKENQWFGNKSRIVVTTQNKQLLVS-HDINHMYQVAYPSKQEALTIFCQHAFKQ 360

Query: 273 HEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSL 332
                 + +++ +        G LPLA+  +G+ +  K   EWE     L S L+     
Sbjct: 361 SS---PSDDLKHLAIEFTTLAGHLPLALRVLGSFMRGKGKEEWEFSLPTLKSRLD----- 412

Query: 333 EALRRMVTLGYNHLPSHLKPCFLYLS-IFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKD 391
             + +++ +GY+ L  H K  FL+++ IF    E   N L    IA        G+    
Sbjct: 413 GEVEKVLKVGYDGLHDHEKDLFLHIACIFSGQHE---NYLKQMIIANNDTYVSFGLQV-- 467

Query: 392 VGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDITVSISRQEN 438
                   L ++S+IQ+      G+I+   +H ++R +   + R+++
Sbjct: 468 --------LADKSLIQKFE---NGRIE---MHSLLRQLGKEVVRKQS 500
>AT5G17680.1 | chr5:5822999-5827153 FORWARD LENGTH=1295
          Length = 1294

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 165/749 (22%), Positives = 284/749 (37%), Gaps = 153/749 (20%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFP 139
           D   L+G S     L  MI     D   +++ + GMGG+GKT +++ ++     +   F 
Sbjct: 181 DSKGLIGMSSHMDFLQSMISIVDKD--VRMLGIWGMGGVGKTTIAKYLYNQ---LSGQFQ 235

Query: 140 CNAWI-TVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEK 198
            + ++  V +  +R  + +      L    L ++ QE   +    V      + E  + K
Sbjct: 236 VHCFMENVKEVCNRYGVRR------LQVEFLCRMFQERDKEAWSSVS-CCNIIKERFRHK 288

Query: 199 RYFVVLDDL-------WILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVY 251
             F+VLDD+        ++ +  W            GSRI++TTR+  L       +LVY
Sbjct: 289 MVFIVLDDVDRSEQLNELVKETGWFG---------PGSRIIVTTRDRHLLLSHGI-NLVY 338

Query: 252 HLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQ 311
            +  L   +A+ L      +  E++      +++  + VN    LPLA+  +G+ L  + 
Sbjct: 339 KVKCLPKKEALQLFCNYAFR--EEIILPHGFEELSVQAVNYASGLPLALRVLGSFLYRRS 396

Query: 312 VSEWE------KFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFE 365
             EWE      K Y H       +  +E LR    + Y+ L    K  FLY+S F   + 
Sbjct: 397 QIEWESTLARLKTYPH-------SDIMEVLR----VSYDGLDEQEKAIFLYISCF---YN 442

Query: 366 IKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDI 425
           +K+   V + +       ++G+T           L  +S+I  S     G +K   IHD+
Sbjct: 443 MKQVDYVRKLLDLCGYAAEIGITI----------LTEKSLIVESN----GCVK---IHDL 485

Query: 426 IRDITVSISRQENFV----------------LLPMGDGSDLVQ-------ENTRHIAFHG 462
           +  +   + RQ+                   LL    G+ LV+       E +   A   
Sbjct: 486 LEQMGRELVRQQAVNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEISEVFASDR 545

Query: 463 SMSCKTGLDWSIIRSLAIFGDR----PKSLAHAVCPDQLRMLRVLDLEDVT--------F 510
           +    + L       L+  G+     P  L++   P +LR LR       T        F
Sbjct: 546 AFEGLSNLKLLNFYDLSFDGETRVHLPNGLSYL--PRKLRYLRWDGYPLKTMPSRFFPEF 603

Query: 511 LIT--------QKDFDHIALLCHLKXXXXXXXXXXXXXPRSIGKLQGLQTLNMP--STYI 560
           L+         +K +D I  L +LK             P  + K   L+ LN+    + +
Sbjct: 604 LVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVP-DLSKATNLEELNLSYCQSLV 662

Query: 561 AALPS--EISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNTICLPKVFTPLVSRDDRAKQ 618
              PS   +  L C +   CI             +K I   I L  + T  +S     K 
Sbjct: 663 EVTPSIKNLKGLSCFYLTNCIQ------------LKDIPIGIILKSLETVGMSGCSSLKH 710

Query: 619 IAELHMATKSCWSESFGV-KVPKGIGKLRDLQVLEYVDIRRTSSRAIKELGQLSKLRKLG 677
             E+   T+  +  S  + ++P  I +L  L  L+  D +R  +     LG L  L+ L 
Sbjct: 711 FPEISWNTRRLYLSSTKIEELPSSISRLSCLVKLDMSDCQRLRTLP-SYLGHLVSLKSL- 768

Query: 678 VTTNGSTKEKCKILYAAIEKLSSLQSLHVDAVL----FSGIIGTLECLDSISSXXXXXXX 733
              N     + + L   ++ L+SL++L V   L    F  +  ++E L            
Sbjct: 769 ---NLDGCRRLENLPDTLQNLTSLETLEVSGCLNVNEFPRVSTSIEVL------------ 813

Query: 734 XXXNGSLEEMPNWIEQLTHLKKFDLRRSK 762
                S+EE+P  I  L+ L+  D+  +K
Sbjct: 814 RISETSIEEIPARICNLSQLRSLDISENK 842
>AT1G69550.1 | chr1:26148836-26153374 REVERSE LENGTH=1401
          Length = 1400

 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 152/350 (43%), Gaps = 32/350 (9%)

Query: 541  PRSIGKLQGLQTLNMP-STYIAALPSEISKLQCLHTLRCIGQFHYDNFSLNHPMKCITNT 599
            P SIG L  L+TLN+   + +  LPS I  L  L  L     +  +  SL      I N 
Sbjct: 925  PSSIGNLINLKTLNLSECSSLVELPSSIGNLINLQEL-----YLSECSSLVELPSSIGNL 979

Query: 600  ICLPKV-FTPLVSRDDRAKQIAEL-HMATKSCWSESFGVKVPKGIGKLRDLQVLEYVDIR 657
            I L K+  +   S  +    I  L ++ T +    S  V++P  IG L +LQ L Y+   
Sbjct: 980  INLKKLDLSGCSSLVELPLSIGNLINLKTLNLSECSSLVELPSSIGNLINLQEL-YLSEC 1038

Query: 658  RTSSRAIKELGQLSKLRKLGVTTNGSTKEKCKILYAAIEKLSSLQSLHVDAVLFSGIIGT 717
             +       +G L  L+KL ++   S  E    L  +I  L +L++L++     SG    
Sbjct: 1039 SSLVELPSSIGNLINLKKLDLSGCSSLVE----LPLSIGNLINLKTLNL-----SGCSSL 1089

Query: 718  LECLDSISSXXXXXXXXXXNGSLEEMPNWIEQLTHLKKFDLRR-SKLKEGKTMLILGALP 776
            +E   SI +            SL E+P+ I  L +LKK DL   S L E    L +G L 
Sbjct: 1090 VELPSSIGNLNLKKLDLSGCSSLVELPSSIGNLINLKKLDLSGCSSLVE--LPLSIGNLI 1147

Query: 777  NLMVLYLYRNAYLGEKLVFKTGAFPNLRTLCIYELDQLREIRFEDGSSPLLEKIEIGKCR 836
            NL  LYL   + L E L    G   NL+ L + E   L E+    G+   L+K+++ KC 
Sbjct: 1148 NLQELYLSECSSLVE-LPSSIGNLINLQELYLSECSSLVELPSSIGNLINLKKLDLNKCT 1206

Query: 837  LESGIIGIIHLPKLKEIPITYGSKVA-GLGQLEGEVNTHPNRPVLLMYSD 885
                   ++ LP+L   P +    VA     LE    + PN  V L + D
Sbjct: 1207 ------KLVSLPQL---PDSLSVLVAESCESLETLACSFPNPQVWLKFID 1247
>AT5G66910.1 | chr5:26718338-26721133 REVERSE LENGTH=816
          Length = 815

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 154/357 (43%), Gaps = 66/357 (18%)

Query: 75  SARNVDEAELVGFS----DSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFES 130
           S   +D   LVG      + KK+LL+            V+ V G  G GKT L  K+ + 
Sbjct: 163 SVPKLDNMVLVGLDWPLVELKKKLLD----------NSVVVVSGPPGCGKTTLVTKLCDD 212

Query: 131 EEDIRKNFPCNAWITVSQSFHRIELLKDMIR-QLLGPSSLDQLLQELQGKVVVQVHHLSE 189
            E I   F    +  VS + +   +++++++    G  + D   Q   G        L +
Sbjct: 213 PE-IEGEFKKIFYSVVSNTPNFRAIVQNLLQDNGCGAITFDDDSQAETG--------LRD 263

Query: 190 YLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAE------- 242
            L E  K+ R  +VLDD+W                  +GS  ++    +DL +       
Sbjct: 264 LLEELTKDGRILLVLDDVW------------------QGSEFLLRKFQIDLPDYKILVTS 305

Query: 243 KCATASL--VYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAI 300
           +    SL   YHL  L+   A +LL++  +       S    + ++++I+ +C   PL I
Sbjct: 306 QFDFTSLWPTYHLVPLKYEYARSLLIQWASPPLH--TSPDEYEDLLQKILKRCNGFPLVI 363

Query: 301 LTIGAVLATKQVSEWEKFYEHLPSELEI-----NPSLEALRRMVTLGYNHLPSHLKPCFL 355
             +G  L  + +  W+   E   SE E      NP++   R+ +   +N L  HLK CF+
Sbjct: 364 EVVGISLKGQALYLWKGQVESW-SEGETILGNANPTV---RQRLQPSFNVLKPHLKECFM 419

Query: 356 YLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVG 412
            +  F +D +I+ + ++  W+ E + R   G ++ +    Y NEL ++++++   +G
Sbjct: 420 DMGSFLQDQKIRASLIIDIWM-ELYGR---GSSSTNKFMLYLNELASQNLLKLVHLG 472
>AT1G17600.1 | chr1:6053026-6056572 REVERSE LENGTH=1050
          Length = 1049

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 33/321 (10%)

Query: 47  NTRYNLVEPISSGTEDDMDSYAEDIRNQSAR-----NVDEAELVGFSDSKKRLLEMIDTN 101
           N   NL   +SS   D+     E  R+ S R      +D   +VG     + L  ++D  
Sbjct: 142 NLIANLSGVVSSHCVDEAIMVGEIARDISRRVTLMHKIDSGNIVGMKAHMEGLNHLLDQE 201

Query: 102 ANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIEL--LKDM 159
           +N+    ++ + GMGG+GKT++ + +++    +   FP + +I   +S  +     LK +
Sbjct: 202 SNE--VLLVGIWGMGGIGKTSIVKCLYDQ---LSPKFPAHCFIENIKSVSKDNGHDLKHL 256

Query: 160 IRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEI 219
            ++LL     D +        +  V    + + + L  ++ F+VLD +        ++ +
Sbjct: 257 QKELLSSILCDDIR-------LWSVEAGCQEIKKRLGNQKVFLVLDGV---DKVAQVHAL 306

Query: 220 AFPKN-NKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMES 278
           A  KN    GSRI+ITTR++ L   C    +VY +  L   DA+ +   K       +  
Sbjct: 307 AKEKNWFGPGSRIIITTRDMGLLNTCG-VEVVYEVKCLDDKDALQMF--KQIAFEGGLPP 363

Query: 279 NKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVS--EWEKFYEHLPSELEINPSLEALR 336
            +   ++  R       LP AI      L  +  S  EWE+    L S L+     E + 
Sbjct: 364 CEGFDQLSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGALESSLD-----ENIM 418

Query: 337 RMVTLGYNHLPSHLKPCFLYL 357
            ++ + Y  LP   +  FL++
Sbjct: 419 EILKISYEGLPKPHQNVFLHV 439
>AT5G11250.1 | chr5:3587978-3591960 REVERSE LENGTH=1190
          Length = 1189

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/392 (20%), Positives = 157/392 (40%), Gaps = 77/392 (19%)

Query: 68  AEDIRN---QSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALS 124
           A DI N    S  + D   LVG     +++  ++  + ++   ++I + G  G+GKT ++
Sbjct: 217 ATDISNILINSTPSRDFDGLVGMRAHLEKMKPLLCLDTDE--VRIIGIWGPPGIGKTTIA 274

Query: 125 RKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLD------QLLQELQG 178
           R ++                 +S SF     ++++      P+  D      QL Q    
Sbjct: 275 RVVYNQ---------------LSHSFQLSVFMENIKANYTRPTGSDDYSAKLQLQQMFMS 319

Query: 179 KVV----VQVHHLSEYLIEELKEKRYFVVLD--------DLWILHDWNWINEIAFPKNNK 226
           ++     +++ HL     + LK+K+  VVLD        D      W W           
Sbjct: 320 QITKQKDIEIPHLG-VAQDRLKDKKVLVVLDGVNQSVQLDAMAKEAW-WFG--------- 368

Query: 227 KGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMV 286
            GSRI+ITT++  L  +    + +Y +DF    +A+ +        +   +     Q + 
Sbjct: 369 PGSRIIITTQDQKLF-RAHGINHIYKVDFPPTEEALQIFCMYAFGQNSPKDG---FQNLA 424

Query: 287 ERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHL 346
            +++N  G LPL +  +G+        EW+K    L S L+ +     ++ ++   Y+ L
Sbjct: 425 WKVINLAGNLPLGLRIMGSYFRGMSREEWKKSLPRLESSLDAD-----IQSILKFSYDAL 479

Query: 347 PSHLKPCFLYLSIFPEDFEIKRNRLVGRWIAEGFVRPKVGMTTKDVGESYFNELINRSMI 406
               K  FL+++ F   F  K  +++   +A+ FV  +             N L  +S+I
Sbjct: 480 DDEDKNLFLHIACF---FNGKEIKILEEHLAKKFVEVR----------QRLNVLAEKSLI 526

Query: 407 QRSRVGIAGKIKTCRIHDIIRDITVSISRQEN 438
             S  G      T  +H ++  +   I R ++
Sbjct: 527 SFSNWG------TIEMHKLLAKLGGEIVRNQS 552
>AT3G44400.1 | chr3:16046331-16049668 REVERSE LENGTH=1008
          Length = 1007

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 144/313 (46%), Gaps = 31/313 (9%)

Query: 69  EDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIF 128
           E I    +++ D+   VG +   +R  +++  + ++   ++I ++G  G+GKT ++  +F
Sbjct: 200 EKISTDVSKDFDD--FVGMAAHMERTEQLLRLDLDE--VRMIGILGPPGIGKTTIATCMF 255

Query: 129 ESEEDIRKNFPCNAWIT-VSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHL 187
           +      + FP  A +T + + + R+  L +   QL      +Q+L ++  +    + HL
Sbjct: 256 DR---FSRRFPFAAIMTDIRECYPRL-CLNERNAQL---KLQEQMLSQIFNQKDTMISHL 308

Query: 188 SEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---KGSRIVITTRNVDLAEKC 244
                E LK+K+ F+VLD++  L   +     A  K  +    GSRI+ITT ++ +  K 
Sbjct: 309 G-VAPERLKDKKVFLVLDEVGHLGQLD-----ALAKETRWFGPGSRIIITTEDLGVL-KA 361

Query: 245 ATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIG 304
              + VY + +   ++A  +         +  E   ++   V+ +    G LPL +  +G
Sbjct: 362 HGINHVYKVGYPSNDEAFQIFCMNAFGQKQPCEGFCDLAWEVKALA---GELPLGLKVLG 418

Query: 305 AVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLS-IFPED 363
           + L      EWE+    L + L+       +  ++   Y+ L    K  FLY++ +F  +
Sbjct: 419 SALRGMSKPEWERTLPRLRTSLD-----GKIGNIIQFSYDALCDEDKYLFLYIACLFNYE 473

Query: 364 FEIKRNRLVGRWI 376
              K   L+G+++
Sbjct: 474 STTKVKELLGKFL 486
>AT4G09420.1 | chr4:5962319-5963776 REVERSE LENGTH=458
          Length = 457

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 126/273 (46%), Gaps = 25/273 (9%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           L+G       L E++D  +N+   ++I + G GG+GKT L+R ++   E++ KNF  + +
Sbjct: 204 LIGLDRHMLALNELLDLKSNE-EVRLIGICGQGGVGKTTLARYVY---EELFKNFHAHVF 259

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           +  +   ++ +  +   ++ L    + +  Q +   + V     S+++   +  +R  +V
Sbjct: 260 VDNAGKIYKQDTDESHSQKSLTSKEIQEGTQTVTRTLTVA----SDFIKSTVSHQRSLLV 315

Query: 204 ---LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMND 260
              +D++  L +   I  + FP     GSR+++ T++  L +       VY +  L+ ++
Sbjct: 316 VDCVDNIKQLEEIANIVGLCFP-----GSRVILVTQDKKLLDDFGVEH-VYEVQSLRYDE 369

Query: 261 AITLLLRKT-NKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFY 319
           A+ +  +   N+ H       + + +  R V   G LPL +  +G+ L  K    WEK  
Sbjct: 370 ALQVFSQSAFNQQH----PPASFESLSFRAVRVAGFLPLLLKILGSSLQDKDGKYWEKEL 425

Query: 320 EHLPSELEINPSLEALRRMVTLGYNHLPSHLKP 352
           + L    E    +E +++  T     +P+ + P
Sbjct: 426 QRLEGGQE-KAIMEVMKKSCT--REKVPTFIFP 455
>AT3G44480.1 | chr3:16090878-16096041 REVERSE LENGTH=1195
          Length = 1194

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 146/330 (44%), Gaps = 35/330 (10%)

Query: 51  NLVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVI 110
           +++E IS+   + ++S+        +R+ D   LVG       L +++  + ++   ++I
Sbjct: 247 DMIEKISTDVSNMLNSFT------PSRDFDG--LVGMRAHMDMLEQLLRLDLDE--VRMI 296

Query: 111 CVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLD 170
            + G  G+GKT ++R +F    D    F  +A +   +  +      +   QL      +
Sbjct: 297 GIWGPPGIGKTTIARFLFNQVSD---RFQLSAIMVNIKGCYPRPCFDEYSAQL---QLQN 350

Query: 171 QLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---K 227
           Q+L ++     + + HL     E L++K+ F+VLD++  L   +     A  K  +    
Sbjct: 351 QMLSQMINHKDIMISHLG-VAQERLRDKKVFLVLDEVDQLGQLD-----ALAKETRWFGP 404

Query: 228 GSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVE 287
           GSRI+ITT ++ +  K    + VY +++   ++A  +         +  E      ++  
Sbjct: 405 GSRIIITTEDLGVL-KAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHE---GFDEIAW 460

Query: 288 RIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLP 347
            +    G LPL +  +G+ L  K   EWE+    L + L+       +  ++   Y+ L 
Sbjct: 461 EVTCLAGELPLGLKVLGSALRGKSKREWERTLPRLKTSLD-----GKIGSIIQFSYDVLC 515

Query: 348 SHLKPCFLYLS-IFPEDFEIKRNRLVGRWI 376
              K  FLY++ +F  +   K   L+G+++
Sbjct: 516 DEDKYLFLYIACLFNGESTTKVKELLGKFL 545
>AT4G19510.1 | chr4:10633685-10637841 FORWARD LENGTH=1211
          Length = 1210

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 44/338 (13%)

Query: 32  RIHNLKSRVEEVSSRNTRYNLVEPISSGTEDDMDSYAED---IRNQSARNVDEAELVGFS 88
           +I  LK  ++  S  N R   V P +S   D +D   ++   + N+ +  V   +L G  
Sbjct: 180 KIEELKVALKTAS--NIR-GFVYPENSSEPDFLDEIVKNTFRMLNELSPCVIPDDLPGI- 235

Query: 89  DSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQ 148
           +S+ + LE +    ND   +V+ V+GM G+GKT ++  ++      ++NF         Q
Sbjct: 236 ESRSKELEKLLMFDNDECVRVVGVLGMTGIGKTTVADIVY------KQNF---------Q 280

Query: 149 SFHRIELLKDM---IRQLLGPSSLDQLLQELQG--KVVVQVHHLSEYLIEELKEKRYFVV 203
            F   E L+D+    ++   P    +LL +L     V V+     E     L+ K+ F+V
Sbjct: 281 RFDGYEFLEDIEDNSKRYGLPYLYQKLLHKLLDGENVDVRAQGRPENF---LRNKKLFIV 337

Query: 204 LDDLWILHDWNWINEIAFPKN-NKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAI 262
           LD+   + +   I  +   KN  ++GSRIVI TR+  L +K A A+  Y +  L   +A+
Sbjct: 338 LDN---VTEEKQIEYLIGKKNVYRQGSRIVIITRDKKLLQKNADAT--YVVPRLNDREAM 392

Query: 263 TLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHL 322
            L   +   NH   E       +    V     LPLA+  +G  L T  ++ W+K  E  
Sbjct: 393 ELFCLQVFGNHYPTEE---FVDLSNDFVCYAKGLPLALKLLGKGLLTHDINYWKKKLEF- 448

Query: 323 PSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
              L++NP  E L++ +   Y  L    K  FL ++ F
Sbjct: 449 ---LQVNPDKE-LQKELKSSYKALDDDQKSVFLDIACF 482
>AT1G63730.1 | chr1:23641770-23645132 FORWARD LENGTH=967
          Length = 966

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 48/298 (16%)

Query: 64  MDSYAEDIRNQSARNV--DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKT 121
           +++ A D+ N+    +  D  ++VG     +++  ++  + N+  A ++ + G  G+GKT
Sbjct: 164 VETIARDVSNKLNTTISKDFEDMVGIEAHLQKMQSLLHLD-NEDEAMIVGICGPSGIGKT 222

Query: 122 ALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGP--SSLDQL------L 173
            ++R +                  +S SF     L   +  L G   S LD+        
Sbjct: 223 TIARALHSR---------------LSSSFQ----LTCFMENLKGSYNSGLDEYGLKLCLQ 263

Query: 174 QELQGKVVVQ----VHHLSEYLIEELKEKRYFVVLDDLWILHDWNWI-NEIAFPKNNKKG 228
           Q+L  K++ Q    + HL   + E L ++   ++LD +  L     + NE ++      G
Sbjct: 264 QQLLSKILNQNDLRIFHLGA-IPERLCDQNVLIILDGVDDLQQLEALTNETSW---FGPG 319

Query: 229 SRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVER 288
           SRI++TT + +L E+    +  YH+DF  + +A  +  R   +      +    +K+VER
Sbjct: 320 SRIIVTTEDQELLEQHDINN-TYHVDFPTIKEARKIFCRSAFRQSS---APYGFEKLVER 375

Query: 289 IVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHL 346
           ++  C  LPL +  +G+ L  K+  +WE        E  ++  +E + R+   GY++L
Sbjct: 376 VLKLCSNLPLGLRVMGSSLRRKKEDDWESILHR--QENSLDRKIEGVLRV---GYDNL 428
>AT5G40910.1 | chr5:16395507-16399129 FORWARD LENGTH=1105
          Length = 1104

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 37/286 (12%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFP 139
           D   +VG      +L   +   ++D   K+I + G  G+GKT ++R +F           
Sbjct: 181 DFEGMVGLEAHLTKLDSFLCLESDD--VKMIGIWGPAGIGKTTIARALFNQ--------- 229

Query: 140 CNAWITVSQSFHRIELLKDMIRQLLGPSSL---DQLLQELQGKVVVQVHHLSEYLIEE-L 195
                 +S  F R+      I      S L   ++LL ++  +  +++HHL    IEE L
Sbjct: 230 ------LSTGF-RLSCFMGTIDVNDYDSKLCLQNKLLSKILNQKDMKIHHLGA--IEEWL 280

Query: 196 KEKRYFVVLDDLWILHDWNWINEIAFPKN-NKKGSRIVITTRNVDLAEKCATASLVYHLD 254
             +R  +VLDD+    D   +  +A   +    GSRI+++  +  +  K    + +Y +D
Sbjct: 281 HNQRVLIVLDDV---DDLEQLEVLAKESSWFGHGSRIIVSLNDRKIL-KAHGINDIYDVD 336

Query: 255 FLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSE 314
           F    +A+ +L     K +   +     +++ +R+V  CG+LPL +  +G+    +   E
Sbjct: 337 FPSEEEALEILCLSAFKQNSPQD---GFEEVAKRVVELCGKLPLGLRVVGSSFYGESEDE 393

Query: 315 WEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
           W      + + L+       +  ++ +GY+ L    +  FL+++ F
Sbjct: 394 WRIQLYGIETNLD-----RKIENVLRVGYDKLSERHQSLFLHIACF 434
>AT5G17970.1 | chr5:5948999-5951619 REVERSE LENGTH=781
          Length = 780

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 179/416 (43%), Gaps = 58/416 (13%)

Query: 25  ERHRIAIRIHNLKSRVEEVSSR-NTRYNLVEPISSGTEDDMDSYAEDIRNQSARNVDEAE 83
           ER R    + N+ +   E SS+ +    ++E I +   +++  +          + D  +
Sbjct: 138 ERQRWRQALTNVGNIAGECSSKWDNDAKMIEKIVAYVSEELFCFTS--------STDFED 189

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIF----ESEEDIRKNFP 139
           L+G       L  M+   +N+   K+I V G  G+GKT ++R ++     S +D   +F 
Sbjct: 190 LLGLEAHVANLKSMLGLESNE--VKMIGVWGPAGIGKTTITRILYNQLSSSNDD---DFQ 244

Query: 140 CNAWI-TVSQSFHRIEL----LKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEE 194
              ++  V  S+ R E+    +K  +R+        + L E+  +  ++V HL     E 
Sbjct: 245 LFIFMENVKGSYRRKEIDGYSMKLHLRE--------RFLSEITTQRKIKVSHLG-VAQER 295

Query: 195 LKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLD 254
           LK ++  +VLDD+  L     + +      N  G+RI++TT +  L  K    + VY +D
Sbjct: 296 LKNQKALIVLDDVDELEQLRALADQTQWVGN--GTRILVTTEDRQLL-KAHGITHVYEVD 352

Query: 255 FLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSE 314
           +   ++A+ +L +     +   E   ++   VE +V   G LPL +  +GA L      E
Sbjct: 353 YPSRDEALKILCQCAFGKNSAPEGYNDLA--VE-VVELAGYLPLGLSVLGASLRGMSKKE 409

Query: 315 WEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGR 374
           W      L + L  N  +E L R+    Y  L    K  FL+++       + R +L+  
Sbjct: 410 WINALPRLRTSL--NGKIEKLLRVC---YEGLDEKDKAIFLHIACLFNGKNVDRVKLL-- 462

Query: 375 WIAEGFVRPKVGMTTKDVGESYFNELINRSMIQRSRVGIAGKIKTCRIHDIIRDIT 430
            +A+  +  + G+            L++RS+I     G    +  C +  + ++IT
Sbjct: 463 -LAKSALDVEFGLKV----------LVDRSLIHIDADGYI--VMHCLLQQLGKEIT 505
>AT5G44510.1 | chr5:17929673-17934188 REVERSE LENGTH=1188
          Length = 1187

 Score = 52.8 bits (125), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/300 (20%), Positives = 123/300 (41%), Gaps = 58/300 (19%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSR----KIFESEE--- 132
           D  E VG       +  ++  +  +   ++I + G  G+GKT +SR    K+F   +   
Sbjct: 209 DFDEFVGIEAHTTEITSLLQLDLEE--VRMIGIWGPAGIGKTTISRVLYNKLFHQFQLGA 266

Query: 133 -----DIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHL 187
                 +R   PC+      +   +++L K+++ Q++            Q  +VV    +
Sbjct: 267 IIDNIKVRYPRPCH-----DEYSAKLQLQKELLSQMIN-----------QKDMVVPHLGV 310

Query: 188 SEYLIEELKEKRYFVVLDDL-------WILHDWNWINEIAFPKNNKKGSRIVITTRNVDL 240
           ++   E LK+K+  +VLDD+        +  D  W            GSRI++ T+++ L
Sbjct: 311 AQ---ERLKDKKVLLVLDDVDGLVQLDAMAKDVQWFG---------LGSRIIVVTQDLKL 358

Query: 241 AEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAI 300
             K      +Y +DF   ++A+ +          +       +++   +    G+LPL +
Sbjct: 359 L-KAHGIKYIYKVDFPTSDEALEIFCMYA---FGEKSPKVGFEQIARTVTTLAGKLPLGL 414

Query: 301 LTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
             +G+ L      EW K    L + L+     + +  ++   YN L    K  FL+++ F
Sbjct: 415 RVMGSYLRRMSKQEWAKSIPRLRTSLD-----DDIESVLKFSYNSLAEQEKDLFLHITCF 469
>AT4G19530.1 | chr4:10651962-10657090 FORWARD LENGTH=1168
          Length = 1167

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 29/305 (9%)

Query: 65  DSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDG----PAKVICVVGMGGLGK 120
           +S +  +       V+EA+    S   +RL E+ +  A  G      +++ VVGM G+GK
Sbjct: 183 ESTSGSVDQGRGEEVEEAKADKISGLNQRLKELEEKVAITGDKRDETRIVEVVGMPGIGK 242

Query: 121 TALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKV 180
           + L +  +E+            W T   S   ++ + ++++ +        LL+EL    
Sbjct: 243 STLLKAFYET------------WKTRFLSSALLQNISELVKAMGLGRLTGMLLKELLPDE 290

Query: 181 VVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIA--FPKNNKKGSRIVITTRNV 238
            +       Y  E+L +   F+VLD +    D   I ++     K  KKGS+IVI  R V
Sbjct: 291 NIDEETYEPY-KEKLLKNTVFIVLDGI---SDETHIQKLLKDHRKWAKKGSKIVIARRAV 346

Query: 239 --DLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKN-MQKMVERIVNKCGR 295
             DL  + +     Y +  L   D +        ++    ++NK    K  +  V     
Sbjct: 347 TRDLLHEDSMVRYTYFVPLLSHRDGLNHFCHYAFRHFAAHQNNKEAFMKESKEFVRYARG 406

Query: 296 LPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFL 355
            PL +  +G  L  K +S WE+  + LP  L  N       R++ + Y+ L    K  FL
Sbjct: 407 HPLILKLLGEELREKSLSYWEEKLKSLPKSLSQN----IRDRVLQVTYDELSQVQKDAFL 462

Query: 356 YLSIF 360
            ++ F
Sbjct: 463 DIACF 467
>AT5G40090.1 | chr5:16042115-16043494 REVERSE LENGTH=460
          Length = 459

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 36/257 (14%)

Query: 70  DIRNQSARNV----------DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLG 119
           D+ NQ AR++          D   LV      K + +++    N    + I + G  G+G
Sbjct: 157 DLLNQIARDISLVVFYSGSNDSNALVAMDRHMKVVYDLLALEVNK-EVRTIGIWGSAGVG 215

Query: 120 KTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGK 179
           KT L+R I+    +I  NF  + ++        +E +KD + +  G         E    
Sbjct: 216 KTTLARYIYA---EIFVNFQTHVFLD------NVENMKDKLLKFEG---------EEDPT 257

Query: 180 VVVQVHHLSEYLIE-ELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNV 238
           V++  +H    + E   K ++  ++ DD+  +    WI  I +      GSR+++ ++N 
Sbjct: 258 VIISSYHDGHEITEARRKHRKILLIADDVNNMEQGKWI--IEYANWFAPGSRVILISQNK 315

Query: 239 DLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPL 298
           +L         VY +  L+ ++A+ +    ++   +      + +++  R V+  G LPL
Sbjct: 316 NLLVDAGVMD-VYEVRSLRYDEALQVF---SHFAFKQPYPPSDFEELAVRAVHLAGFLPL 371

Query: 299 AILTIGAVLATKQVSEW 315
            +  +G+ LA K   EW
Sbjct: 372 GLRLLGSFLAGKGREEW 388
>AT5G45440.1 | chr5:18412426-18413466 REVERSE LENGTH=347
          Length = 346

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 46/280 (16%)

Query: 59  GTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGL 118
           GT  D     ED R ++   +   ++ GF +  K L   +    +    K + VVG  G+
Sbjct: 31  GTTGDETKQVED-RVETDSGLPGHDIYGFENEIKSLQHFLLDQKSYKLFKSLVVVGEYGV 89

Query: 119 GKTALSRKIFESEEDIRKNFPCNAWITVSQSFH------RIELLKDMIRQLLGPSSLDQL 172
           GKTAL ++IF ++ D+R  +    W+++  +        +I +LK +++   G    + +
Sbjct: 90  GKTALCQQIF-NDYDVRNAYAPRIWVSMHSNESKEGLDGKICVLKTILK---GLGVEESM 145

Query: 173 LQELQGKVVVQVHHLSE------------------YLIE-ELKEKRYFVVLDDLWILHDW 213
            + +  +VV +V +  E                  Y +   L+ K+Y +V DD+  + +W
Sbjct: 146 FESIHREVVEEVSNRQEAGEIDGETAKEKEISALLYALHLNLRWKKYLIVFDDVQEIDNW 205

Query: 214 N------------WINEIA--FPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMN 259
           +            W   ++  FPK +  G R++ TTR+ +LA+         H  +   +
Sbjct: 206 DEKLDAKLNEGEKWGKYLSDGFPKGS--GGRVIYTTRDENLAKNLVVQKHEIHRLWPLSD 263

Query: 260 DAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLA 299
                 + +      + ES +N +K ++ ++NK   LPLA
Sbjct: 264 SNSVWKIYEAMIQKREKESPRNDKKCIDELMNKSRGLPLA 303
>AT3G44630.3 | chr3:16196292-16200410 FORWARD LENGTH=1241
          Length = 1240

 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 147/330 (44%), Gaps = 35/330 (10%)

Query: 51  NLVEPISSGTEDDMDSYAEDIRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVI 110
           +++E I++   + ++S+        +R+ D   LVG       L +++  + ++   ++I
Sbjct: 243 DMIEKIATDVSNMLNSFT------PSRDFDG--LVGMRAHMDMLEQLLRLDLDE--VRII 292

Query: 111 CVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLD 170
            + G  G+GKT ++R +     D    F  +A +   +  +      +   QL      +
Sbjct: 293 GIWGPPGIGKTTIARFLLNQVSD---RFQLSAIMVNIKGCYPRPCFDEYSAQL---QLQN 346

Query: 171 QLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---K 227
           Q+L ++     + + HL     E L++K+ F+VLD++  L   +     A  K  +    
Sbjct: 347 QMLSQMINHKDIMISHLG-VAQERLRDKKVFLVLDEVDQLGQLD-----ALAKETRWFGP 400

Query: 228 GSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVE 287
           GSRI+ITT ++ +  K    + VY +++   ++A  +         +  E    +   V+
Sbjct: 401 GSRIIITTEDLGVL-KAHGINHVYKVEYPSNDEAFQIFCMNAFGQKQPHEGFDEIAWEVK 459

Query: 288 RIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLP 347
            +    G+LPL +  +G+ L  K   EWE+    L + L+       +  ++   Y+ L 
Sbjct: 460 ALA---GKLPLGLKVLGSALRGKSKPEWERTLPRLRTSLD-----GKIGGIIQFSYDALC 511

Query: 348 SHLKPCFLYLS-IFPEDFEIKRNRLVGRWI 376
              K  FLY++ +F  +   K   L+G+++
Sbjct: 512 DEDKYLFLYIACLFNGESTTKVKELLGKFL 541
>AT1G52660.1 | chr1:19613475-19614796 FORWARD LENGTH=380
          Length = 379

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 105/209 (50%), Gaps = 16/209 (7%)

Query: 109 VICVVGMGGLGKTALSRKIFESEEDIRKN-FPCNAWITVSQSFHRIELLKDMIRQLLGPS 167
           +I + G+ G+GKT +  ++       + N F    W+ VS++ + ++ ++D IR+ +G  
Sbjct: 162 IIGLYGVEGVGKTTVLTQVNNRLLQQKANGFDFVLWVFVSKNLN-LQKIQDTIREKIG-- 218

Query: 168 SLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVVLDDLWILHDWNWINEIAFPKNNKK 227
            LD+                +  + E L ++R+ + LDD+W   D   +     P + + 
Sbjct: 219 FLDRTWTSKSE------EEKAAKIFEILSKRRFALFLDDVWEKVDL--VKAGVPPPDAQN 270

Query: 228 GSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDMESNKNMQKMVE 287
            S+IV TT + ++ ++ +  + +  ++ L    A  L   K N   + ++S+ ++ K+ +
Sbjct: 271 RSKIVFTTCSEEVCKEMSAQTKI-KVEKLAWERAWDLF--KKNVGEDTIKSHPDIAKVAQ 327

Query: 288 RIVNKCGRLPLAILTIGAVLATKQV-SEW 315
            +  +C  LPLA++TIG  +A+K+   EW
Sbjct: 328 EVAARCDGLPLALVTIGRAMASKKTPQEW 356
>AT4G16950.1 | chr4:9539010-9544340 REVERSE LENGTH=1450
          Length = 1449

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 40/269 (14%)

Query: 107 AKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITV-SQSFHRIELLKDMIRQLLG 165
           A+++ + G  G+GK+ + R +F     +   FP  A++T  S S   +  +K        
Sbjct: 209 ARMVGIWGQSGIGKSTIGRALFSQ---LSIQFPLRAFLTYKSTSGSDVSGMK-------- 257

Query: 166 PSSLDQLLQELQGKVVVQVHHLSEYLIEE-LKEKRYFVVLDDLWILHDWNWINEIAFPKN 224
            S   +LL E+ G+  +++ H    ++E+ LK K+  ++LDD         ++ + F K 
Sbjct: 258 LSWEKELLSEILGQKDIKIEHFG--VVEQRLKHKKVLILLDD---------VDNLEFLKT 306

Query: 225 -------NKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNKNHEDME 277
                     GSRI++ T++     K     LVY +       A+T+L R         +
Sbjct: 307 LVGKAEWFGSGSRIIVITQDRQFL-KAHDIDLVYEVKLPSQGLALTMLCRSAFGKDSPPD 365

Query: 278 SNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRR 337
             K +   V ++    G LPL +  +G+ L  +   EW +    L + L  +     + +
Sbjct: 366 DFKELAFEVAKLA---GHLPLGLNVLGSSLRRRGKKEWMEMMPRLRNGLNGD-----IMK 417

Query: 338 MVTLGYNHLPSHLKPCFLYLSIFPEDFEI 366
            + + Y+ L    +  FL ++     FE+
Sbjct: 418 TLRVSYDRLHQKDQDMFLCIACLFNGFEV 446
>AT1G56520.2 | chr1:21174880-21178920 REVERSE LENGTH=1118
          Length = 1117

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 124/278 (44%), Gaps = 24/278 (8%)

Query: 84  LVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAW 143
           +VG +D  + +  ++D   NDG  K++ + G  G+GK+ ++  +     ++   F    +
Sbjct: 186 MVGLNDHLREMESLLDLK-NDG-VKIVGISGPAGIGKSTIATALHGRLSNM---FQRTCF 240

Query: 144 ITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKRYFVV 203
           +   +  ++I L  D  R  L            Q K+  +V HLS  + E L + R  ++
Sbjct: 241 VDNLRESYKIGL--DEYRLKLHLQQQLLAYVLNQDKI--RVGHLS-VMKERLDDLRVLII 295

Query: 204 LDDLWILHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAIT 263
           LDD+  L+    + +I +      GSR+++TT N ++  +      +YH+ F    +A+ 
Sbjct: 296 LDDVEHLYQLEALADIRW---FGPGSRVIVTTENREILLQHGIKD-IYHVGFPSEGEALM 351

Query: 264 LLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLP 323
           +      +            K+   + + CG LPL +  +G +L  K  ++W    E LP
Sbjct: 352 IFCLSAFRQPS---PPYGFLKLTYEVASICGNLPLGLHVLGTLLWGKSQADW---IEELP 405

Query: 324 SELEINPSLEA-LRRMVTLGYNHLPSHLKPCFLYLSIF 360
               +   L+  +  ++ +GY  L    +  FL ++++
Sbjct: 406 ---RLKDCLDGRIESVLKVGYESLYEKDQALFLLIAVY 440
>AT4G12010.1 | chr4:7197325-7201393 REVERSE LENGTH=1220
          Length = 1219

 Score = 51.2 bits (121), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 136/329 (41%), Gaps = 42/329 (12%)

Query: 43  VSSRNTRYNLVEPISSGTEDDMDSYAEDI---RNQSARNVDEAELVGFSDSKKRLLEMID 99
            S+ N    +V+ IS+     +D  A D     N  A + +E  LVG     K L +++ 
Sbjct: 144 ASASNILGYVVKEISTSEAKLVDEIAVDTFKKLNDLAPSGNEG-LVGIESRLKNLEKLLS 202

Query: 100 TNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSFHRIELLKDM 159
               D    +I +VGM G+GKT L+  ++     +R  F  + ++T              
Sbjct: 203 WEDLD-TVHIIGIVGMVGIGKTTLADCLYGR---MRGQFDGSCFLT-------------N 245

Query: 160 IRQLLGPSSLDQLLQELQGKV-------VVQVHHLSEYLIEELKEKRYFVVLDDLWILHD 212
           IR+  G S L+ LLQ+L   V       +    +  E     LK KR  +VLDD   ++D
Sbjct: 246 IRENSGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERFERRLKSKRLLIVLDD---VND 302

Query: 213 WNWINEI-AFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLLRKTNK 271
              I  +    K  + GSRI+ITTR+  L E        Y L  L   +A+ L       
Sbjct: 303 EKQIRYLMGHCKWYQGGSRIIITTRDSKLIE--TIKGRKYVLPKLNDREALKLFSLNAFS 360

Query: 272 NHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLPSELEINPS 331
           N   ++  + +  MV   ++     PLA+  +G+ L  +    WE   + L S      S
Sbjct: 361 NSFPLKEFEGLTNMV---LDYAKGHPLALKVLGSDLCERDDLYWEAKLDRLKSR-----S 412

Query: 332 LEALRRMVTLGYNHLPSHLKPCFLYLSIF 360
              +  ++   Y  L +  K  FL ++ F
Sbjct: 413 HGDIYEVLETSYEELTTEQKNVFLDIACF 441
>AT5G66900.1 | chr5:26714931-26717757 REVERSE LENGTH=810
          Length = 809

 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 38/292 (13%)

Query: 91  KKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFPCNAWITVSQSF 150
           KKRLL        D     + V    G GKT L  ++ + + DI+  F    +  VS + 
Sbjct: 179 KKRLL--------DDSVVTLVVSAPPGCGKTTLVSRLCD-DPDIKGKFKHIFFNVVSNTP 229

Query: 151 HRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEK-RYFVVLDDLWI 209
           +     + +++ LL  +  + L  E   +  V +  L    +EELKE     +VLDD+W 
Sbjct: 230 N----FRVIVQNLLQHNGYNALTFENDSQAEVGLRKL----LEELKENGPILLVLDDVWR 281

Query: 210 LHDWNWINEIAFPKNNKKGSRIVITTRNVDLAEKCATASLVYHLDFLQMNDAITLLL--- 266
             D +++ +      N K   I++T+R  D     +     Y L  L+ +DA  LL+   
Sbjct: 282 GAD-SFLQKFQIKLPNYK---ILVTSR-FDFPSFDSN----YRLKPLEDDDARALLIHWA 332

Query: 267 -RKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWEKFYEHLP-S 324
            R  N + ++ E       ++++I+ +C   P+ I  +G  L  + ++ W+   E     
Sbjct: 333 SRPCNTSPDEYED------LLQKILKRCNGFPIVIEVVGVSLKGRSLNTWKGQVESWSEG 386

Query: 325 ELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLSIFPEDFEIKRNRLVGRWI 376
           E  +      +   +   ++ L  +LK CFL +  F ED +I+ + ++  W+
Sbjct: 387 EKILGKPYPTVLECLQPSFDALDPNLKECFLDMGSFLEDQKIRASVIIDMWV 438
>AT5G18360.1 | chr5:6080049-6083027 REVERSE LENGTH=901
          Length = 900

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 123/282 (43%), Gaps = 26/282 (9%)

Query: 80  DEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFESEEDIRKNFP 139
           D   LVG  +  + L  ++   + +   K++ + G  G+GKT ++R +F     + +NF 
Sbjct: 182 DSYNLVGIDNHMRELDSLLCLESTE--VKMVGIWGPAGIGKTTIARALFNR---LSENFQ 236

Query: 140 CNAWITVSQSFHRIELLKDMIRQLLGPSSLDQLLQELQGKVVVQVHHLSEYLIEELKEKR 199
              ++   +   R   L     QL      +Q L E+     +++H L   + E L++ +
Sbjct: 237 HTIFMENVKGSSRTSELDAYGFQL---RLQEQFLSEVIDHKHMKIHDLG-LVKERLQDLK 292

Query: 200 YFVVLDDLWILHDWNWINEIAFPKNNK---KGSRIVITTRNVDLAEKCATASLVYHLDFL 256
             VVLDD+  L   +     A  K ++    GSRI++TT N  L  +    + +Y L F 
Sbjct: 293 VLVVLDDVDKLEQLD-----ALVKQSQWFGSGSRIIVTTENKQLL-RAHGITCIYELGFP 346

Query: 257 QMNDAITLLLRKTNKNHEDMESNKNMQKMVERIVNKCGRLPLAILTIGAVLATKQVSEWE 316
             +D++ +  +       +  +     ++   I    G LPLA+  +G+ L      E +
Sbjct: 347 SRSDSLQIFCQYA---FGESSAPDGCIELATEITKLAGYLPLALKVLGSSLRGMSKDEQK 403

Query: 317 KFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYLS 358
                L + L      E +R ++ +GY+ +    K  FL+++
Sbjct: 404 SALPRLRTSLN-----EDIRNVLRVGYDGIHDKDKVIFLHIA 440
>AT3G25510.1 | chr3:9260838-9268797 REVERSE LENGTH=1982
          Length = 1981

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/330 (21%), Positives = 142/330 (43%), Gaps = 49/330 (14%)

Query: 71  IRNQSARNVDEAELVGFSDSKKRLLEMIDTNANDGPAKVICVVGMGGLGKTALSRKIFES 130
           I    + N D   L+G     + +  ++  + +D   ++I + G  G+GKT ++R +   
Sbjct: 189 IAGYHSSNWDFEALIGMGAHMENMRALLRLDLDD--VRMIGIWGPPGIGKTTIARFLLSQ 246

Query: 131 EEDIRKNFPCNAWITVSQSFHRIELLKDMIRQLLGPSSLDQ--LLQELQGKVVVQVHHLS 188
                          VS+SF    ++ + I++      LD+  +  +LQ K++ ++ +  
Sbjct: 247 ---------------VSKSFQLSTIMVN-IKECYPSPCLDEYSVQLQLQNKMLSKMINQK 290

Query: 189 EYLI-------EELKEKRYFVVLDDLWILHDWNWINEIAFPKNNK---KGSRIVITTRNV 238
           + +I       E LK+K+ F+VLDD+  L   +     A  K  +    GSRI+ITT N+
Sbjct: 291 DIMIPHLGVAQERLKDKKVFLVLDDVDQLGQLD-----ALAKETRWFGPGSRIIITTENL 345

Query: 239 DLAEKCATASLVYHLDFLQMNDAITLL-LRKTNKNHEDMESNKNMQKMVERIVNKCGRLP 297
            L       + +Y ++F   ++A  +  +    + H          ++   +    G LP
Sbjct: 346 RLL-MAHRINHIYKVEFSSTDEAFQIFCMHAFGQKH----PYNGFYELSREVTELAGGLP 400

Query: 298 LAILTIGAVLATKQVSEWEKFYEHLPSELEINPSLEALRRMVTLGYNHLPSHLKPCFLYL 357
           L +  +G+ L      EW++    L + L+       +  ++   Y  L    K  FL +
Sbjct: 401 LGLKVMGSSLRGMSKQEWKRTLPRLRTCLD-----GKIESILMFSYEALSHEDKDLFLCI 455

Query: 358 SIFPEDFEIKRNRLVGRWIAEGFVRPKVGM 387
           + F   F  ++ + V + +A+ F+  + G+
Sbjct: 456 ACF---FNYQKIKKVEKHLADRFLDVRQGL 482
  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,581,600
Number of extensions: 834097
Number of successful extensions: 3180
Number of sequences better than 1.0e-05: 110
Number of HSP's gapped: 2960
Number of HSP's successfully gapped: 121
Length of query: 953
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 845
Effective length of database: 8,145,641
Effective search space: 6883066645
Effective search space used: 6883066645
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)