BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0264300 Os06g0264300|AK073271
(413 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38470.1 | chr5:15404720-15407500 FORWARD LENGTH=379 369 e-102
AT1G79650.4 | chr1:29972406-29975132 REVERSE LENGTH=396 311 5e-85
AT3G02540.1 | chr3:533095-536151 REVERSE LENGTH=420 299 2e-81
AT1G16190.1 | chr1:5543267-5545892 FORWARD LENGTH=369 243 2e-64
AT5G16090.1 | chr5:5255797-5257230 REVERSE LENGTH=172 86 5e-17
>AT5G38470.1 | chr5:15404720-15407500 FORWARD LENGTH=379
Length = 378
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 214/420 (50%), Positives = 249/420 (59%), Gaps = 50/420 (11%)
Query: 1 MKLFVKTLKGTNFEIEASPEASVAEVKRIIESTQGQNVYPADQQMLIHQGKILKDDTTLE 60
MK+FVKTL G+NFEIE P V++VK IE+ +G YPA +QMLIHQGK+LKD+TTLE
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 59
Query: 61 GNKVAENSFLVIMLXXXXXXXXXXXXXXXXPVSQSQPAT--------PVASVARXXXXXX 112
N V ENSF+VIML S +QP T P ASV
Sbjct: 60 ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAPTASVP------- 112
Query: 113 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSQAASNLVSGSNLEQTIQQI 172
Y QAASNLV+G+ LE T+QQI
Sbjct: 113 -----------------VPTSGTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQI 155
Query: 173 LDMGGGTWERDMVVRALRAAYNNPERAIDYLYSGIPENXXXXXXXXXXXXXXXXGNXXXX 232
LDMGGG+W+RD VVRALRAA+NNPERA++YLYSGIP N
Sbjct: 156 LDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQ 215
Query: 233 XXXXXXXXXXXXXXXXXXXXNANPLNLFPQGIPSAGSNPXXXXXXXXXXXXLDALRQLPQ 292
NANPLNLFPQG+P+A + LD LR Q
Sbjct: 216 PQQAAAPAAATGGP------NANPLNLFPQGMPAADA--------GAGAGNLDFLRNSQQ 261
Query: 293 FQALLALVQANPQILQPMLQELGKQNPQILRLIQENQAEFLRLVNESPDSGAAGGNILGQ 352
FQAL A+VQANPQILQPMLQELGKQNPQ++RLIQE+QA+FLRL+NE P G N++ Q
Sbjct: 262 FQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINE-PVEGEE--NVMEQ 318
Query: 353 LAAAMPQALTVTPEEREAIQRLEAMGFNRELVLEVFFACNKDEELAANYLLDHGHEFEDQ 412
L AAMPQA+TVTPEEREAI+RLE MGF+R +VLEVFFACNK+EELAANYLLDH HEFEDQ
Sbjct: 319 LEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFEDQ 378
>AT1G79650.4 | chr1:29972406-29975132 REVERSE LENGTH=396
Length = 395
Score = 311 bits (796), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/421 (43%), Positives = 232/421 (55%), Gaps = 36/421 (8%)
Query: 1 MKLFVKTLKGTNFEIEASPEASVAEVKRIIESTQGQNVYPADQQMLIHQGKILKDDTTLE 60
MKL VKTLKG++FEI P ++ VK+ IE +QG++ YP QQ+LIH GK+LKD+T+L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 GNKVAENSFLVIMLXXXXX-----XXXXXXXXXXXPVS----QSQPATPVASVARXXXXX 111
NKV E FLV+ML PVS ++PA P S +
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAP--STTQSSPVP 118
Query: 112 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSQAASNLVSGSNLEQTIQQ 171
Y QAAS LVSGS+LEQ +QQ
Sbjct: 119 ASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQQ 178
Query: 172 ILDMGGGTWERDMVVRALRAAYNNPERAIDYLYSGIPENXXXXXXXXXXXXXXXXGNXXX 231
I++MGGG+W+++ V RALRAAYNNPERA+DYLYSGIP+
Sbjct: 179 IMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSGA---- 234
Query: 232 XXXXXXXXXXXXXXXXXXXXXNANPLNLFPQ-GIPSAGSNPXXXXXXXXXXXXLDALRQL 290
N++PL+LFPQ + +AGS L+ LR
Sbjct: 235 -----------APVAPASGGPNSSPLDLFPQETVAAAGSG---------DLGTLEFLRNN 274
Query: 291 PQFQALLALVQANPQILQPMLQELGKQNPQILRLIQENQAEFLRLVNESPDSGAAGGNIL 350
QFQ L +V +NPQILQPMLQELGKQNPQ+LRLIQENQAEFL+LVNE + G++
Sbjct: 275 DQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMF 334
Query: 351 GQLAAAMPQALTVTPEEREAIQRLEAMGFNRELVLEVFFACNKDEELAANYLLDHGHEFE 410
Q MP A+ VTP E+EAIQRLEAMGF+R LV+E F AC+++EELAANYLL++ +FE
Sbjct: 335 DQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 394
Query: 411 D 411
D
Sbjct: 395 D 395
>AT3G02540.1 | chr3:533095-536151 REVERSE LENGTH=420
Length = 419
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 181/262 (69%), Gaps = 18/262 (6%)
Query: 152 YSQAASNLVSGSNLEQTIQQILDMGGGTWERDMVVRALRAAYNNPERAIDYLYSGIPENX 211
Y QAASNL +GSNLE TIQQILDMGGGTW+R+ VV ALRAA+NNPERA++YLY+GIPE
Sbjct: 174 YGQAASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQA 233
Query: 212 XXXXXXXXXXXXXXXGNXXXXXXXXXXXXXXXXXXXXXXXXNANPLNLFPQGIPSAGSNP 271
N NANPL+LFPQG+P+ G NP
Sbjct: 234 EVPPVARPPASAGQPANPPAQTQQPAAAPASGP--------NANPLDLFPQGLPNVGGNP 285
Query: 272 XXXXXXXXXXXXLDALRQLPQFQALLALVQANPQILQPMLQELGKQNPQILRLIQENQAE 331
LD LR QFQAL A+VQANPQ+LQPMLQELGKQNP ++RLIQ++QA+
Sbjct: 286 GAGT--------LDFLRNSQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQAD 337
Query: 332 FLRLVNESPDSGAAGGNILGQLAAAM--PQALTVTPEEREAIQRLEAMGFNRELVLEVFF 389
FLRL+NE + G GN+LGQ+AA M PQA+ VT EEREAI+RLEAMGF R LVLEVFF
Sbjct: 338 FLRLINEPVEGGGESGNLLGQMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFF 397
Query: 390 ACNKDEELAANYLLDHGHEFED 411
ACNK+EELAANYLLDH HEFE+
Sbjct: 398 ACNKNEELAANYLLDHMHEFEE 419
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 1 MKLFVKTLKGTNFEIEASPEASVAEVKRIIESTQGQNVYPADQQMLIHQGKILKDDTTLE 60
MK+FVKTLKGT+FEIE PE SV +VK+ IES QG +VYPA +QMLIHQGK+LKD+TT+E
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 61 GNKVAENSFLVIML 74
NKVAENSF+VIM+
Sbjct: 61 ENKVAENSFIVIMM 74
>AT1G16190.1 | chr1:5543267-5545892 FORWARD LENGTH=369
Length = 368
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 170/263 (64%), Gaps = 30/263 (11%)
Query: 152 YSQAASNLVSGSNLEQTIQQILDMGGGTWERDMVVRALRAAYNNPERAIDYLYSGIPENX 211
Y QAAS LVSGS++EQ +QQI++MGGG+W+++ V RALRAAYNNPERA+DYLYSGIPE
Sbjct: 133 YGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETV 192
Query: 212 XXXXXXXXXXXXXXXGNXXXXXXXXXXXXXXXXXXXXXXXXNANPLNLFPQGIPS--AGS 269
N++PL+LFPQ S AG
Sbjct: 193 ----------------TIPATNLSGVGSGRELTAPPPSGGPNSSPLDLFPQEAVSDAAGG 236
Query: 270 NPXXXXXXXXXXXXLDALRQLPQFQALLALVQANPQILQPMLQELGKQNPQILRLIQENQ 329
+ L+ LR QFQ L ++V +NPQILQPMLQELGKQNPQ+LRLIQENQ
Sbjct: 237 D----------LGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQ 286
Query: 330 AEFLRLVNESPDSGAAGG-NILGQLAAAMPQALTVTPEEREAIQRLEAMGFNRELVLEVF 388
AEFL+L+NE P G+ G +I Q MP ++ VTPEE+E+I+RLEAMGF+R +V+E F
Sbjct: 287 AEFLQLLNE-PYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRAIVIEAF 345
Query: 389 FACNKDEELAANYLLDHGHEFED 411
+C+++EELAANYLL+H +FED
Sbjct: 346 LSCDRNEELAANYLLEHSADFED 368
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%)
Query: 1 MKLFVKTLKGTNFEIEASPEASVAEVKRIIESTQGQNVYPADQQMLIHQGKILKDDTTLE 60
MKL VKTLKG++FEI P ++ VK+ IE +Q ++ YP QQ+LIH GK+LKD+TTL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 61 GNKVAENSFLVIML 74
NKV E FLV+ML
Sbjct: 61 ENKVTEEGFLVVML 74
>AT5G16090.1 | chr5:5255797-5257230 REVERSE LENGTH=172
Length = 171
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 306 ILQPMLQELGKQNPQILRLIQENQAEFLRLVNESPDSGAAGGNILGQLAAAMPQALTVTP 365
I + L+E+ KQNP + ++I+ N A F+ ++N+ N L Q + Q L VT
Sbjct: 74 ITKGCLEEMEKQNPPLFQMIRHNSAGFVPVLNKE---SFERDNELAQPEEDLLQ-LQVTA 129
Query: 366 EEREAIQRLEAMGFNRELVLEVFFACNKDEELAANYLLDHGH 407
+ EAI RLEAMGF R +VLEVF ACNK+E+LAAN+LLDH H
Sbjct: 130 VDDEAINRLEAMGFERRVVLEVFLACNKNEQLAANFLLDHIH 171
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 54/74 (72%)
Query: 1 MKLFVKTLKGTNFEIEASPEASVAEVKRIIESTQGQNVYPADQQMLIHQGKILKDDTTLE 60
MK+ VKTLKG FEIE P SVAEVK+ IE+ G + YPA QQ+LIH+ + L+D+TT+E
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 61 GNKVAENSFLVIML 74
NKV + S + I++
Sbjct: 61 ANKVFDKSVIAIII 74
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,971,835
Number of extensions: 185861
Number of successful extensions: 482
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 498
Number of HSP's successfully gapped: 14
Length of query: 413
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 312
Effective length of database: 8,337,553
Effective search space: 2601316536
Effective search space used: 2601316536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)