BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0258900 Os06g0258900|AK067794
(1376 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G18270.3 | chr1:6283634-6293772 REVERSE LENGTH=1394 1716 0.0
AT4G20930.1 | chr4:11198627-11201036 REVERSE LENGTH=348 113 8e-25
AT4G29120.1 | chr4:14350861-14351865 FORWARD LENGTH=335 106 8e-23
AT1G71170.1 | chr1:26830673-26831572 FORWARD LENGTH=300 100 8e-21
AT3G25530.1 | chr3:9271949-9273514 REVERSE LENGTH=290 95 2e-19
AT1G71180.1 | chr1:26832335-26833291 FORWARD LENGTH=319 94 5e-19
AT1G17650.1 | chr1:6069594-6071964 REVERSE LENGTH=359 89 1e-17
>AT1G18270.3 | chr1:6283634-6293772 REVERSE LENGTH=1394
Length = 1393
Score = 1716 bits (4443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 871/1395 (62%), Positives = 1075/1395 (77%), Gaps = 29/1395 (2%)
Query: 6 VVSFVGADELGVSLAASFVRSGAIVRCFVAPGGDGSATALAELGGVRCASPAEAARDAEL 65
VV FVG D LA+S +RSG V+ F ELGG +C SPA+ + A
Sbjct: 4 VVGFVGLDSFSFELASSLLRSGFKVQAFEI--STELVEKFIELGGHKCDSPADVGKAAAA 61
Query: 66 VIV-LSDTDGVDELFFGPEGIVKGLCSGAVVLIRSTMLPSHLEKLNQKLADEKKNALL-D 123
V+V LS D + ++ FG EG++KGL AV+L+ ST+ L+KL ++L ++++ + D
Sbjct: 62 VVVVLSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTISTLQLQKLEKQLTEKREQIFVVD 121
Query: 124 GYIFSGLSDELKQKIVVVASGRHDVTERTGQFFSGLDTAVYFVEGEFGSSSKIKLVNDLL 183
Y+ G+S+ L K++++ASGR D R + + + +Y EGE G+ SK+K+VN+LL
Sbjct: 122 AYVLKGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKVKMVNELL 181
Query: 184 ESIHFIASIEAMFLGVRAGIHPSIIYDIISNAAGSSRIFVEIVPKLLREDSLLIDYLESS 243
E IH +A++EA+ LG +AG+HP I+YDIISNAAG+S I+ +P LL++D + +L+
Sbjct: 182 EGIHLVAAVEAISLGSQAGVHPWILYDIISNAAGNSWIYKNHIPLLLKDD-IEGRFLDVL 240
Query: 244 KTNAGYVMDMAKAVIFPLPLVAVSYQQLIHGCSSANGDALVSPL-KVWEQSFGVNIIDAA 302
N V D AK++ FP+PL+AV+ QQLI G S GD + L K+ E+ GV I++AA
Sbjct: 241 SQNLAIVEDKAKSLPFPVPLLAVARQQLISGISQMQGDDTATSLAKISEKVLGVGILEAA 300
Query: 303 SQQIYDASKLADQLVMACKTAKTIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARF 362
++++Y LA ++ K IGFIGLGAMGFGMA+HLLKS FSV YDVYKPTL RF
Sbjct: 301 NRELYKPEDLAKEITTQAKPVNRIGFIGLGAMGFGMAAHLLKSNFSVCGYDVYKPTLVRF 360
Query: 363 TDLGGLTKDSPEEVSKDVEILVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPG 422
+ GGL +SP EV+KDV++LVIMV NEVQAE+VLYG+ GAV + +G +++L+STVSP
Sbjct: 361 ENAGGLAANSPAEVTKDVDVLVIMVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPA 420
Query: 423 FVIKLKERLEAECRDIKLVDAPVSGGVKRAAEGTLTIIASGTDEALQCTGSVLSALSEKL 482
FV +L+ RLE E +D+KLVDAPVSGGVKRAA G LTI+ASGTDEAL+ G VLSALSEKL
Sbjct: 421 FVSQLERRLENEGKDLKLVDAPVSGGVKRAAMGELTIMASGTDEALKSAGLVLSALSEKL 480
Query: 483 YVIKGGCGAASSVKMVNQLLAGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWMFG 542
YVIKGGCGA S VKMVNQLLAGVHIASAAEAMAFGARL L TR+LF +I ++ G SWMF
Sbjct: 481 YVIKGGCGAGSGVKMVNQLLAGVHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWMFE 540
Query: 543 NRVPHMLDNDYTPYSAVDIFVKDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWGRFD 602
NRVPHMLDNDYTPYSA+DIFVKDLGIV+ E S+ ++PLH+S++AHQLFL+GSA+GWGR D
Sbjct: 541 NRVPHMLDNDYTPYSALDIFVKDLGIVTREGSSRKVPLHISTVAHQLFLAGSAAGWGRID 600
Query: 603 DAAVVKVYETLTGVKVEGRPPMLNKEDVLSSLPAEWPEDPMDDLVSSASHNSKKILVVLD 662
DA VVKVYETL G+KVEGR P+L K+D+L SLPAEWP DP D+ NSK LVVLD
Sbjct: 601 DAGVVKVYETLAGIKVEGRLPVLKKQDLLKSLPAEWPSDPTTDIHRLNMGNSK-TLVVLD 659
Query: 663 DDPTGTQTVHDIEVLTEWPVEALAEQFQKLPACFFILTNSRSMTAEKATLLVKDICRNLE 722
DDPTGTQTVHD+EVLTEW VE+++EQF+K PACFFILTNSRS++ EKA+ L+KDIC NL
Sbjct: 660 DDPTGTQTVHDVEVLTEWSVESISEQFRKKPACFFILTNSRSLSPEKASELIKDICSNLC 719
Query: 723 AAAKSVPGVSYTVVLRGDSTLRGHFPEEADAVVSVLGEMDAWIICPFFLQGGRYTIDDIH 782
AA+K V YT+VLRGDSTLRGHFP+EADA VS+LGEMDAWIICPFFLQGGRYTIDD+H
Sbjct: 720 AASKEVGNADYTIVLRGDSTLRGHFPQEADAAVSILGEMDAWIICPFFLQGGRYTIDDVH 779
Query: 783 YVADSDRLIPAGETEFAKDAAFGYKSSNLRQWVEEKTKGRISENQVSTISVNLLRKEGPN 842
YVADSDRL+PAGETEFAKDA+FGYKSSNLR+WVEEKT G I N V +IS+ LLRK GP+
Sbjct: 780 YVADSDRLVPAGETEFAKDASFGYKSSNLREWVEEKTAGVIPANSVQSISIQLLRKGGPD 839
Query: 843 AVCQHLCSLKK--------------------GSACIVNAASERDMSVFAAGMIQAELKGK 882
AVC+ LCSLKK GS CIVNAASERDM+VFAAGMIQAELKG+
Sbjct: 840 AVCEFLCSLKKVNFSKQISRRLLDVAFRELLGSTCIVNAASERDMAVFAAGMIQAELKGR 899
Query: 883 RFLCRTAASFVSXXXXXXXXXXXXXTDLGLKRALTGGLIVVGSYVPKTTKQVDELRSQCE 942
FLCRTAASFVS D + +G LIVVGSYVPKTTKQV+EL+SQ
Sbjct: 900 SFLCRTAASFVSALIGIIPKDPVLPKDFESNKESSGALIVVGSYVPKTTKQVEELQSQHN 959
Query: 943 QSLRIIEVSVEMISMKSAEDRDHEISRVIELGNAYIQSRKDTLVVTSRQLITGKTPEESL 1002
Q+LR IE+SVE +++KS+E RD EI R +E+ +A++++ ++TL+++SR+LITGKT ESL
Sbjct: 960 QNLRSIEISVEKVALKSSEVRDEEIRRAVEMADAFLRAGRETLIMSSRELITGKTSSESL 1019
Query: 1003 EINYKVSSALVEIVRGIGSRPRYILAKGGITSSDLATKALEARRAKVMGQALAGVPLWQL 1062
+IN KVSSALVE+V I +RPRYILAKGGITSSD ATKAL+ARRA V+GQALAGVP+W+L
Sbjct: 1020 DINSKVSSALVEVVSQISTRPRYILAKGGITSSDTATKALKARRALVIGQALAGVPVWKL 1079
Query: 1063 GPESRHPGVPYIVFPGNVGDNSALAKVVQNWACPSRSSAKELLLNAENGGYAIGAFNVYN 1122
GPESRHPGVPYIVFPGNVG+++ALA+VV++W+ + S KELLLNAE GGYA+GAFNVYN
Sbjct: 1080 GPESRHPGVPYIVFPGNVGNSTALAEVVKSWSVVAGRSTKELLLNAEKGGYAVGAFNVYN 1139
Query: 1123 LEGIDAVVSAAEAEKSPAILQVHPSALKQGGVPLVSCCIAAAEHASVPITVHYDHGTSKS 1182
LEGI+AVV+AAE E SPAILQVHP A KQGG+PLVSCCI+AAE A VPI+VH+DHGT+K
Sbjct: 1140 LEGIEAVVAAAEEENSPAILQVHPGAFKQGGIPLVSCCISAAEQARVPISVHFDHGTTKH 1199
Query: 1183 DLLQALEMGFDSIMVDGSHLPLGKNILYTRSISSLAHSKGMLVEAELGRLSGTEDGLTVE 1242
+LL+ALE+G DS+MVDGSHL +N+ YT+SI+ LA SK ++VEAELGRLSGTEDGLTVE
Sbjct: 1200 ELLEALELGLDSVMVDGSHLSFTENLSYTKSITELARSKNIMVEAELGRLSGTEDGLTVE 1259
Query: 1243 EYEARFTDVAQALEFIDETGIDSLAVCIGNVHGKYPPSGPNLRFDLLEDLRALTMKKGVS 1302
+YEA+ T+V QA EF+ ETGID+LAVCIGNVHGKYP SGPNL+ DLL++L AL+ KKGV
Sbjct: 1260 DYEAKLTNVNQAQEFM-ETGIDALAVCIGNVHGKYPKSGPNLKLDLLKELHALSSKKGVF 1318
Query: 1303 LVLHGASGLPHELVKECIALGVRKFNVNTEVRNSYLESLKRPEK-DLIHXXXXXXXXXXX 1361
LVLHGASGL L+KECI GVRKFNVNTEVR +Y+E+L +K D++
Sbjct: 1319 LVLHGASGLSENLIKECIENGVRKFNVNTEVRTAYMEALSSGKKTDIVDVMSATKAAMKA 1378
Query: 1362 XXXXXXRLFGSSGKA 1376
RLFGS+GKA
Sbjct: 1379 VIADKIRLFGSAGKA 1393
>AT4G20930.1 | chr4:11198627-11201036 REVERSE LENGTH=348
Length = 347
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 28/278 (10%)
Query: 326 IGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDSPEEVSKDVEILVI 385
+GFIGLG MGF M ++L+++G+ V +D+ + + FT++G ++++P EV++D E+++
Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVIT 99
Query: 386 MVANEVQAENVLYGNAGAVSVMAAGTSI-----ILSSTVSPGFVIK---------LKERL 431
M+ + +V G G ++ I I SST+ P K LKE+
Sbjct: 100 MLPSSSHVMDVYTGTNG---LLLGENDIRPALFIDSSTIDPQTTRKISLAVSNCNLKEKR 156
Query: 432 EAECRDIKLVDAPVSGGVKRAAEGTLTIIASGTDEALQCTGSVLSALSEKLYVIKGGCGA 491
+ + + ++DAPVSGGV A GTLT + G ++A +L ++ + + GG G
Sbjct: 157 DNWEKPV-MLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMG-RTSIYCGGSGN 214
Query: 492 ASSVKMVNQLLAGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWMFG--NRVPHML 549
S+ K+ N L V + +EA+A G L + L E++ + G W N VP ++
Sbjct: 215 GSAAKICNNLAMAVSMLGTSEALALGQSLGISASTLTEVLNTSSGRCWSSDAYNPVPGVM 274
Query: 550 -----DNDYTPYSAVDIFVKDLGI--VSHESSNARIPL 580
DY A + KDL + S E + PL
Sbjct: 275 KGVPSSRDYNGGFASKLMAKDLNLAAASAEEVGHKSPL 312
>AT4G29120.1 | chr4:14350861-14351865 FORWARD LENGTH=335
Length = 334
Score = 106 bits (265), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 326 IGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDSPEEVSKDVEILVI 385
IG+IG G MG M HL+K+G++V ++ D+G DSP V++ +++
Sbjct: 40 IGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQSDVVFT 99
Query: 386 MVANEVQAENVLYG-NAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAP 444
+V +VL +GA+S + G ++ +T P ++ + A ++ +DAP
Sbjct: 100 IVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAK--AASFKNCFSIDAP 157
Query: 445 VSGGVKRAAEGTLTIIASGTDEALQCTGSVLSALSEKLYVIKGGCGAASSVKMVNQLLAG 504
VSGG A G L+I A G + ++ + S + + ++ G G K+ NQ+
Sbjct: 158 VSGGDLGAKNGKLSIFAGGDETTVKRLDPLFSLMGKVNFM--GTSGKGQFAKLANQITIA 215
Query: 505 VHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSW---MFGNRVPHMLDNDYTPYSAVDI 561
+ E + + + L ++ E I S ++G+R+ L D+ P V+
Sbjct: 216 STMLGLVEGLIYAHKAGLDVKKFLEAISTGAAGSKSIDLYGDRI---LKRDFDPGFYVNH 272
Query: 562 FVKDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVKVYETLTGVKVE 619
FVKDLGI +E + L ++A QL+LS A G G A++ E L V V+
Sbjct: 273 FVKDLGICLNECQRMGLALPGLALAQQLYLSLKAHGEGDLGTQALLLALERLNNVSVQ 330
>AT1G71170.1 | chr1:26830673-26831572 FORWARD LENGTH=300
Length = 299
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 134/285 (47%), Gaps = 20/285 (7%)
Query: 338 MASHLLKSGFSVIAYDVYKPTLARFTDL---GGLTKDSPEEVSKDVEILVIMVANEVQAE 394
M SH+L +G+SV VY L + DL GG T +SP+E+ + +++ +V N
Sbjct: 28 MVSHILAAGYSVT---VYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFTIVGNSNDVR 84
Query: 395 NVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAE 454
++L G+ G +S + G + ++ PG ++ EA RD VDAPVSGG A E
Sbjct: 85 SLLLGDDGVLSGLKPGGVTVDMTSSKPGLAREIYA--EARRRDCWAVDAPVSGGDAGARE 142
Query: 455 GTLTIIASGTDEALQCTGSVLSALSEKLYVIKGGCGAASSVKMVNQLLAGVHIASAAEAM 514
G LTI A G E ++ V+ + + GG G+ S K+ NQ+ G ++ AE +
Sbjct: 143 GKLTIFAGGDSEIVEWLAPVMKTMG--IVRFMGGAGSGQSCKIGNQICVGSNMIGLAEGI 200
Query: 515 AFGARLNLRTRRLFEIIQH-ARGYSWM--FGNRVPHMLDNDYTPYSAVDIFVKDLGIVSH 571
F + L + E ++ A G + M FG M DY + VKDLG+ +
Sbjct: 201 VFAEKAGLDPVKWLEAVKDGAAGSAVMRLFGE---MMAVRDYKATGFAEYMVKDLGMAAE 257
Query: 572 ESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVKVYETLTGV 616
+ +++ QLF A+G G+ VV V L G+
Sbjct: 258 AAMAM----PGTALNKQLFTVMVANGDGKLGFQGVVDVIRRLNGL 298
>AT3G25530.1 | chr3:9271949-9273514 REVERSE LENGTH=290
Length = 289
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 9/286 (3%)
Query: 326 IGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDL---GGLTKDSPEEVSKDVEI 382
+GF+GLG MG M+ +LLK+GF V V+ TL++ +L G +SP EV K +
Sbjct: 3 VGFLGLGIMGKAMSMNLLKNGFKVT---VWNRTLSKCDELVEHGASVCESPAEVIKKCKY 59
Query: 383 LVIMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVD 442
+ M+++ A +V++ G + + G I STV +K+ E + + + V+
Sbjct: 60 TIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITG--KGGRFVE 117
Query: 443 APVSGGVKRAAEGTLTIIASGTDEALQCTGSVLSALSEKLYVIKGGCGAASSVKMVNQLL 502
PVSG K A +G L I+A+G + + L ++ + + G G + +K++ ++
Sbjct: 118 GPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYL-GQVGNGAKMKLIVNMI 176
Query: 503 AGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWMFGNRVPHMLDNDYTPYSAVDIF 562
G + + +E + + L + L +I+ + MF + P M + Y P +
Sbjct: 177 MGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQ 236
Query: 563 VKDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVK 608
KD+ + + + V++ A++ F + G G D +AV++
Sbjct: 237 QKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIE 282
>AT1G71180.1 | chr1:26832335-26833291 FORWARD LENGTH=319
Length = 318
Score = 94.0 bits (232), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 22/285 (7%)
Query: 338 MASHLLKSGFSVIAYDVYKPTLARFTDL---GGLTKDSPEEVSKDVEILVIMVANEVQAE 394
M SH++ +G+SV VY L + DL G +SP+E+++ +++ +V N
Sbjct: 49 MVSHIIAAGYSVT---VYARDLRKTKDLQTKGARIANSPKELAEMSDVVFTIVGNFNDVR 105
Query: 395 NVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAPVSGGVKRAAE 454
++L G+ G +S + G + ++ PG ++ EA R+ VDAPVSGG A E
Sbjct: 106 SLLLGDDGVLSGLTPGGVTVDMTSSKPGLAREIHA--EARRRNCWAVDAPVSGGDAGARE 163
Query: 455 GTLTIIASGTDEALQCTGSVLSALSEKLYVIKGGCGAASSVKMVNQLLAGVHIASAAEAM 514
GTL I A G E ++ V+ + Y+ G G+ S K+ NQ+ ++ AE +
Sbjct: 164 GTLGIFAGGDSEIVEWLSPVMKNIGTVTYM--GEAGSGQSCKIGNQIAGASNLVGLAEGI 221
Query: 515 AFGARLNLRTRRLFEIIQH-ARGYSWM--FGNRVPHMLDNDYTPYSAVDIFVKDLGIVSH 571
F + L T + E ++ A G + M FG + + DY + VKDLG+ +
Sbjct: 222 VFAEKAGLDTVKWLEAVKDGAAGSAVMRLFGEMI---VKRDYRATGFAEYMVKDLGMAAE 278
Query: 572 ESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVKVYETLTGV 616
+ ++++ QLF A+G G+ VV V L G+
Sbjct: 279 AAMPG------AALSKQLFTGMVANGDGKLGIQGVVSVIRRLNGI 317
>AT1G17650.1 | chr1:6069594-6071964 REVERSE LENGTH=359
Length = 358
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
Query: 325 TIGFIGLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDSPEEVSKDVEILV 384
+IGF+G+G MG MA +L+K+G V ++ K LG K SPEEV+ ++
Sbjct: 68 SIGFLGMGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLTF 127
Query: 385 IMVANEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAP 444
M+A+ A +V G GA+ +++G + STV I + ++++ ++AP
Sbjct: 128 AMLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDT--GALFLEAP 185
Query: 445 VSGGVKRAAEGTLTIIASGTDEALQCTGSVLSALSE-KLYVIKGGCGAASSVKMVNQLLA 503
VSG K A +G L + +G + L + + K Y+ + G GAA +K+V ++
Sbjct: 186 VSGSKKPAEDGQLIFLTAGDKPLYEKAAPFLDIMGKSKFYLGEVGNGAA--MKLVVNMIM 243
Query: 504 GVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWMFGNRVPHMLDNDYTPYSAVDIFV 563
G +AS AE + ++ L L E++ + M+ + P M+ + Y +
Sbjct: 244 GSMMASFAEGILLSQKVGLDPNVLVEVVSQGAINAPMYSLKGPSMIKSVYPTAFPLKHQQ 303
Query: 564 KDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVK 608
KD+ + + + +++ A++L+ + G D +AV++
Sbjct: 304 KDMRLALGLAESVSQSTPIAAAANELYKVAKSYGLSDEDFSAVIE 348
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 27,138,978
Number of extensions: 1115840
Number of successful extensions: 2865
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2836
Number of HSP's successfully gapped: 10
Length of query: 1376
Length of database: 11,106,569
Length adjustment: 111
Effective length of query: 1265
Effective length of database: 8,063,393
Effective search space: 10200192145
Effective search space used: 10200192145
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)