BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0256500 Os06g0256500|AK068236
         (567 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42740.1  | chr5:17136080-17140622 FORWARD LENGTH=561          900   0.0  
AT4G24620.1  | chr4:12708972-12712610 REVERSE LENGTH=614          140   2e-33

>AT5G42740.1 | chr5:17136080-17140622 FORWARD LENGTH=561
          Length = 560

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/550 (77%), Positives = 473/550 (86%)

Query: 2   ASSALICDTEQWKGLQAHVGAIQKTHLRDLMDDAERCKAMTAEYEGIFLDYSRQRATGET 61
           +S+ALICDTE WK L+ HV  I+KTHLRDLM DA RC++M  E++G+ LDYSRQRAT ET
Sbjct: 3   SSTALICDTEAWKDLKGHVEDIKKTHLRDLMSDANRCQSMMMEFDGLLLDYSRQRATVET 62

Query: 62  MXXXXXXXXXXXXXXXXXXMFSGDKINSTENRSVLHVALRAPRDEVIKSDGVNVVPEVWG 121
           M                  MF+G+ INSTENRSVLHVALRAP+D VIK+DG+NVVPEVW 
Sbjct: 63  MDKLLNLAKASQLTEKISRMFNGEHINSTENRSVLHVALRAPKDAVIKADGMNVVPEVWN 122

Query: 122 VKDKIKQFSETFRSGSWVGATGKALTNVVSVGIGGSFLGPLFVHAALQTDPEAAESAKGR 181
           V DKIK+FS+  RSGSWVGATGK L +V+++GIGGSFLGPLFVH ALQTDPEA ESAKGR
Sbjct: 123 VLDKIKEFSDKIRSGSWVGATGKPLKDVIAIGIGGSFLGPLFVHTALQTDPEALESAKGR 182

Query: 182 QLRFLANVDPVDVARSIKDLDPETTLVVVVSKTFTTAETMLNARTLKEWIVSSLGPDAVA 241
           QLRFLAN+DPVDVAR+I  L+PETTLVVVVSKTFTTAETMLNARTL+EWI ++LG  AVA
Sbjct: 183 QLRFLANIDPVDVARNISGLNPETTLVVVVSKTFTTAETMLNARTLREWITAALGASAVA 242

Query: 242 KHMIAVSTNLELVEKFGIDPKNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFPIVQKFLEG 301
           KHM+AVSTNL LVEKFGIDP NAFAFWDWVGGRYSVCSAVGVLPLSLQYGF +V+KFL+G
Sbjct: 243 KHMVAVSTNLALVEKFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFSMVEKFLKG 302

Query: 302 AASIDKHFRSSSFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQLSMES 361
           A+SID+HF+S+ FEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQ+SMES
Sbjct: 303 ASSIDQHFQSTPFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKFAPHIQQVSMES 362

Query: 362 NGKGVSIDGVQLSFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLKG 421
           NGKGVSIDG+ L FETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIG+VKSQQPVYLKG
Sbjct: 363 NGKGVSIDGLPLPFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGIVKSQQPVYLKG 422

Query: 422 EIVSNHDELMSNFFAQPDALAYGKTPEQLHSEKVPEHLISHKTFQGNRXXXXXXXXXXXA 481
           E+VSNHDELMSNFFAQPDALAYGKTPEQL  E V E+LI HKTF GNR           A
Sbjct: 423 EVVSNHDELMSNFFAQPDALAYGKTPEQLQKENVSENLIPHKTFSGNRPSLSLLLPELTA 482

Query: 482 YEIGQLLSIYEHRIAVQGFLWGINSFDQWGVELGKSLASQVRKSLHASRMEGKPVQGFNS 541
           Y +GQLL+IYEHR+AVQGF+WGINSFDQWGVELGK LA+QVRK LH+SR +G   +GFN 
Sbjct: 483 YNVGQLLAIYEHRVAVQGFVWGINSFDQWGVELGKVLATQVRKQLHSSRTQGTAPEGFNY 542

Query: 542 STASLLTRYL 551
           ST +LL RYL
Sbjct: 543 STTTLLKRYL 552



>AT4G24620.1 | chr4:12708972-12712610 REVERSE LENGTH=614
          Length = 613

 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 220/490 (44%), Gaps = 60/490 (12%)

Query: 47  GIFLDYSRQRATGETMXXXXXXXXXXXXXXXXXXMFSGDKINSTENRSVLHVALR----A 102
           G++LD SR   T E +                  +  G   N  E R V H  LR    A
Sbjct: 89  GLYLDISRVGFTDEFVAEMEPRFQAAFKAMED--LEKGSIANPDEGRMVGHYWLRNSKLA 146

Query: 103 PRDEVIKSDGVNVVPEVWGVKDKIKQFSETFRSGSWVGATGKA--LTNVVSVGIGGSFLG 160
           P+   +K+   N +       D I  FS+   SG     +      T ++SVGIGGS LG
Sbjct: 147 PK-PTLKTLIENTL-------DSICAFSDDIISGKIKPPSSPEGRFTQILSVGIGGSALG 198

Query: 161 PLFVHAALQTDPEAAESAKGRQLRFLANVDPVDVARSIKDLDPE--TTLVVVVSKTFTTA 218
           P FV  AL  D          ++RF+ N DP  +   I  L PE  +TLVVV+SK+  T 
Sbjct: 199 PQFVAEALAPDNPPL------KIRFIDNTDPAGIDHQIAQLGPELASTLVVVISKSGGTP 252

Query: 219 ET---MLNARTLKEWIVSSLGPDAVAKHMIAVSTNLELVEKFG-IDPKNA-FAFWDWVGG 273
           ET   +L  +  K +  + L     AK  +A++    L++    I+   A F  +DWVGG
Sbjct: 253 ETRNGLLEVQ--KAFREAGLN---FAKQGVAITQENSLLDNTARIEGWLARFPMYDWVGG 307

Query: 274 RYSVCSAVGVLPLSLQYGFPIVQKFLEGAASIDKHFRSSSFEKNIPVLLGLLSVWNVSFL 333
           R S+ SAVG+LP +LQ G   V++ L GAA +D+  R++S + N   LL +   W  + +
Sbjct: 308 RTSIMSAVGLLPAALQ-GIN-VREMLTGAALMDEATRTTSIKNNPAALLAMCWYWASNGV 365

Query: 334 GYPARAILPYSQALEKFAPHIQQLSMESNGKGVSIDGVQLSFETGEIDFGEPGTNGQHSF 393
           G     +LPY  +L  F+ ++QQL MES GK   +DG  ++   G   +G  G+  QH++
Sbjct: 366 GSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNTVN--QGLTVYGNKGSTDQHAY 423

Query: 394 YQLIHQG-RVIPCDFIGVVKSQQPVYLKGEIVSNHDELMSNFFAQPDALAYGKTPEQLHS 452
            Q +  G       FI V++ + P          HD  +       D L +G     L  
Sbjct: 424 IQQLRDGVHNFFATFIEVLRDRPP---------GHDWELEPGVTCGDYL-FG----MLQG 469

Query: 453 EKVPEHLISHKTFQGNRXXXXXXXXXXXAYEIGQLLSIYEHRIAVQGFLWGINSFDQWGV 512
            +          +   R              +G ++++YE  + +   +  IN++ Q GV
Sbjct: 470 TR-------SALYANGRESISVTIQEVTPTSVGAIIALYERAVGLYASIVNINAYHQPGV 522

Query: 513 ELGKSLASQV 522
           E GK  A++V
Sbjct: 523 EAGKKAAAEV 532



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,331,954
Number of extensions: 443456
Number of successful extensions: 997
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 992
Number of HSP's successfully gapped: 2
Length of query: 567
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 463
Effective length of database: 8,255,305
Effective search space: 3822206215
Effective search space used: 3822206215
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)