BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0256300 Os06g0256300|AK105344
(453 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37710.1 | chr5:14979159-14981400 FORWARD LENGTH=437 543 e-155
AT3G49050.1 | chr3:18181498-18183613 FORWARD LENGTH=478 485 e-137
AT4G00500.1 | chr4:225214-226978 REVERSE LENGTH=461 422 e-118
AT3G14075.1 | chr3:4663819-4666338 REVERSE LENGTH=643 78 1e-14
AT2G42450.1 | chr2:17672425-17674854 REVERSE LENGTH=547 75 7e-14
AT4G16070.1 | chr4:9096808-9100596 REVERSE LENGTH=655 66 3e-11
>AT5G37710.1 | chr5:14979159-14981400 FORWARD LENGTH=437
Length = 436
Score = 543 bits (1400), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/448 (58%), Positives = 340/448 (75%), Gaps = 19/448 (4%)
Query: 1 MSVSCGLEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIYEDDL 60
MSV+CGLE V C+G +RWAWKR T++G+ DS W +A P EFEP+PRI RVILA+YE DL
Sbjct: 1 MSVACGLECVFCVGFSRWAWKRCTHVGSDDSATWTSATPEEFEPIPRISRVILAVYEPDL 60
Query: 61 SNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLNLTRN 120
NP P G ++ V+KR T+E PPYI+Y+DH H+E+VLAIRGLNL +
Sbjct: 61 RNPK--ISPSLGTFDLNPEWVIKRVTHEKTQGRSPPYIIYIDHDHREIVLAIRGLNLAKE 118
Query: 121 ADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHS 180
+DYK+ L+DNKLG +M GGYVH GLLK+A ++L +E++TL + ++NG +Y L+FAGHS
Sbjct: 119 SDYKI-LLDNKLGQKMLGGGYVHRGLLKSAAWVLNQESETLWRVWEENGREYDLVFAGHS 177
Query: 181 LGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDF 240
LGSG+AALM VLVVN M G+IPR+++RC+ALAPARCMSLNLAVKYADVI+SV+LQDDF
Sbjct: 178 LGSGVAALMAVLVVNTPAMIGDIPRNKVRCFALAPARCMSLNLAVKYADVISSVILQDDF 237
Query: 241 LPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFCR 300
LPRT TPLE IF S+FCLPCLLF++CLRDTF + RK +DPRRLYAPGR+YHIVERKFC
Sbjct: 238 LPRTATPLEDIFKSVFCLPCLLFLVCLRDTFIPEGRKLRDPRRLYAPGRIYHIVERKFC- 296
Query: 301 CGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTT---PP 357
RFPPEVRTAIPV+GRFEHIVLS + TSDHAI+WIERE+EKAL++++ T P
Sbjct: 297 --RFPPEVRTAIPVDGRFEHIVLSSNATSDHAILWIEREAEKALQILREKSSETVVTMAP 354
Query: 358 AQQKMERLQSFEEEHKNALERAKTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATSEAKS 417
+++MERL + E+EHK+ALERA +L++PHAV ++ + EA++E K+
Sbjct: 355 KEKRMERLSTLEKEHKDALERAVSLNIPHAV---------STAEEEEECNNGEASAELKT 405
Query: 418 AGRTSWDELMHKLFTRDEGGKLVVKEDI 445
+ +WDE++ KLF R G+ V+ +++
Sbjct: 406 K-KKNWDEVVDKLFHRSNSGEFVLNDNV 432
>AT3G49050.1 | chr3:18181498-18183613 FORWARD LENGTH=478
Length = 477
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/477 (53%), Positives = 326/477 (68%), Gaps = 39/477 (8%)
Query: 1 MSVSCG----LEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIY 56
MS+ CG LE V CLGC RW +KR Y +DSE W A EFEPVPR CR ILA+Y
Sbjct: 1 MSILCGCCPLLECVYCLGCARWGYKRCLYTAGHDSEDWGLATTDEFEPVPRFCRYILAVY 60
Query: 57 EDDLSNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLN 116
EDD+ NP + PP GY G++ ++ + TYE P YI+Y+DH H+++V+AIRGLN
Sbjct: 61 EDDIRNPL-WEPP-EGY-GINPDWLLLKKTYEDTQGRAPAYILYLDHVHQDIVVAIRGLN 117
Query: 117 LTRNADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGPDYKLIF 176
L + +DY +L+DNKLG + FDGGYVH+GL+K+A ++L+ E K L+EL+++ P Y L F
Sbjct: 118 LAKESDY-AMLLDNKLGERKFDGGYVHNGLVKSAGYVLDEECKVLKELVKKY-PSYTLTF 175
Query: 177 AGHSLGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVL 236
AGHSLGSG+A ++ +LVV + + GNI R ++RC+A+APARCMSLNLAV+YADVINSV+L
Sbjct: 176 AGHSLGSGVATMLALLVVRHPERLGNIDRKRVRCFAIAPARCMSLNLAVRYADVINSVIL 235
Query: 237 QDDFLPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVER 296
QDDFLPRT TPLE IF S+FCLPCLL I C++DT +++ KDPRRLYAPGRMYHIVER
Sbjct: 236 QDDFLPRTATPLEDIFKSVFCLPCLLCIRCMKDTCVPEQKMLKDPRRLYAPGRMYHIVER 295
Query: 297 KFCRCGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTP 356
K CR GR+PP V+TA+PV+GRFEHIVLSC+ TSDHAI+WIERE+++AL LM NEK
Sbjct: 296 KPCRLGRYPPVVKTAVPVDGRFEHIVLSCNATSDHAIIWIEREAQRALNLMMENEKKMEI 355
Query: 357 PAQQKMERLQSFEEEH----KNALERAKTLDVPHAVDLS--------------------- 391
P +Q+MER +S EH + AL RA TLDVPHA ++
Sbjct: 356 PEKQRMERQESLAREHNLEYRAALRRAVTLDVPHAESMAYEYGTFDKTQEDETEEEEVET 415
Query: 392 EVEIQEGSSPTP-----PSDTHSEATSEAKSAGRTSWDELMHKLFTRDEGGKLVVKE 443
E E ++ S P S + + T + R SWDEL+ LF RDE G L ++
Sbjct: 416 EEEEEDTDSIAPMVGESSSSSSVKPTYRIRRNRRVSWDELIEHLFERDESGNLTFEK 472
>AT4G00500.1 | chr4:225214-226978 REVERSE LENGTH=461
Length = 460
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/473 (48%), Positives = 311/473 (65%), Gaps = 40/473 (8%)
Query: 1 MSVSCG---LEWVVCLGCTRWAWKRLTYIGAYDSEAWPAAAPGEFEPVPRICRVILAIYE 57
MS+ C LE V CLGCT W WK+ Y ++SE W A EFEP+PRICR+ILA+YE
Sbjct: 1 MSILCCVPVLECVYCLGCTHWLWKKCLYSAGHESENWGLATSDEFEPIPRICRLILAVYE 60
Query: 58 DDLSNPTKFAPPGRGYAGVDLAGVVKRATYEHVGNTCPPYIVYVDHRHKEVVLAIRGLNL 117
++L +P +APP GY G+D V+ + Y+ PY++Y+DH + +VVLAIRGLNL
Sbjct: 61 ENLHDPM-WAPPD-GY-GIDPNHVILKKDYDQTEGRVTPYMIYLDHENGDVVLAIRGLNL 117
Query: 118 TRNADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFILERETKTLQELLQQNGPDYKLIFA 177
+ DY VL+DNKLG FDGGYVH+GLLKAA ++ E E L+ELL+ N P Y L F
Sbjct: 118 AKECDY-AVLLDNKLGQTKFDGGYVHNGLLKAAMWVFEEEHVVLRELLEAN-PSYSLTFV 175
Query: 178 GHSLGSGIAALMTVLVVNNRKMFGNIPRSQIRCYALAPARCMSLNLAVKYADVINSVVLQ 237
GHSLG+G+ +L+ + V+ NR GNI R +IRC+A+AP RCMSL+LAV YADVINSVVLQ
Sbjct: 176 GHSLGAGVVSLLVLFVIQNRVRLGNIERKRIRCFAIAPPRCMSLHLAVTYADVINSVVLQ 235
Query: 238 DDFLPRTPTPLEYIFGSIFCLPCLLFIMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERK 297
DDFLPRT T LE +F SI CLPCLL + CL+DTF ++RK KD RRLYAPGR+YHIV RK
Sbjct: 236 DDFLPRTTTALENVFKSIICLPCLLCLTCLKDTFTFEERKLKDARRLYAPGRLYHIVVRK 295
Query: 298 FCRCGRFPPEVRTAIPVEGRFEHIVLSCSTTSDHAIVWIERESEKALELMKGNEKPTTPP 357
R GR+PP VRTA+PV+GRFE IVLSC+ T+DHAI+WIERES++AL+LM ++ P
Sbjct: 296 PLRLGRYPPVVRTAVPVDGRFEQIVLSCNATADHAIIWIERESQRALDLMVEEDQVMQIP 355
Query: 358 AQQKMERLQSF----EEEHKNALERAKTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATS 413
+QK+ R +S +EE++ A+ +A +L++P SP+P T +
Sbjct: 356 VEQKIVRQKSIVEDHDEEYRAAIMKAASLNIP-------------MSPSPSYGTFHDTEE 402
Query: 414 EAKSAG---------------RTSWDELMHKLFTRDEGGKLVVKEDIKARNIV 451
SAG R WD+ + F ++ + ++ ++ +++ ++
Sbjct: 403 GESSAGSGMEGSPSGWSFKGMRRKWDQFIDCHFPVNDNSEHMIFKNQESQALL 455
>AT3G14075.1 | chr3:4663819-4666338 REVERSE LENGTH=643
Length = 642
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Query: 95 PPYIVYVDHRHKEVVLAIRGLNLTRN----ADYKVV----LMDNKLGMQMFDGGYVHHGL 146
P + V VDH K +L IRG + ++ A +V + N+ G+ GY H G+
Sbjct: 169 PAFTVLVDHNTKYFLLLIRGTHSIKDTLTAATGAIVPFHHTVVNERGVSNLVLGYAHCGM 228
Query: 147 LKAAQFILERETKTLQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNIPRS 206
+ AA+ I + T L + L+Q PDYK+ GHSLG G AAL+T ++ +KM S
Sbjct: 229 VAAARCIAKLATPCLLKGLEQY-PDYKIKIVGHSLGGGTAALLT-YIMREQKML-----S 281
Query: 207 QIRCYALAPARCMSLNLAVKYADVINSVVLQDDFLP 242
C APA CM+ LA D I SV+ D +P
Sbjct: 282 TATCVTFAPAACMTWELADSGNDFIVSVINGADLVP 317
>AT2G42450.1 | chr2:17672425-17674854 REVERSE LENGTH=547
Length = 546
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 95 PPYIVYVDHRHKEVVLAIRGLNLTRNADYKVVLMDNKLGMQMFDGGYVHHGLLKAAQFIL 154
P Y + VDHR K VV IRG + + +V ++ F+G H G +AA++ L
Sbjct: 229 PGYYIGVDHRRKLVVFGIRGTHTIYDLITDIVSSSDE--EVTFEGYSTHFGTAEAARWFL 286
Query: 155 ERETKTLQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNIPRSQ------- 207
E +T++ L + YKL GHSLG IA+LM + M +PR +
Sbjct: 287 NHELQTIRRCLAKY-EGYKLRLVGHSLGGAIASLMAI-------MLKKMPREELGFDAEI 338
Query: 208 IRCYALAPARCMSLNLAVKYADVINSVVLQDDFLPR 243
I A C+S LA ++ + ++V+QDD +PR
Sbjct: 339 ISAVGYATPPCVSKELAENCSEFVTTIVMQDDIIPR 374
>AT4G16070.1 | chr4:9096808-9100596 REVERSE LENGTH=655
Length = 654
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 95 PPYIVYVDHRHKEVVLAIRGLNLTRNA----------DYKVVLMDNKLGMQMFDGGYVHH 144
P + + D K ++L IRG + ++ + VL D G+ GY H
Sbjct: 167 PAFTIIRDTNSKCILLLIRGTHSIKDTLTAATGAVVPFHHSVLHDG--GLSNLVLGYAHC 224
Query: 145 GLLKAAQFILERETKTLQELLQQNGPDYKLIFAGHSLGSGIAALMTVLVVNNRKMFGNIP 204
G++ AA++I + L + L +N P +K+ GHSLG G A+L+T ++ +K F +
Sbjct: 225 GMVAAARWIAKLSVPCLLKALDEN-PSFKVQIVGHSLGGGTASLLT-YILREQKEFASAT 282
Query: 205 RSQIRCYALAPARCMSLNLAVKYADVINSVVLQDDFLP 242
C+ APA CM+ +LA I +++ D +P
Sbjct: 283 -----CFTFAPAACMTWDLAESGKHFITTIINGSDLVP 315
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,711,277
Number of extensions: 469090
Number of successful extensions: 1387
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1365
Number of HSP's successfully gapped: 6
Length of query: 453
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 351
Effective length of database: 8,310,137
Effective search space: 2916858087
Effective search space used: 2916858087
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)