BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0253600 Os06g0253600|Os06g0253600
(321 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37660.2 | chr5:14959842-14961165 FORWARD LENGTH=299 158 3e-39
AT2G01660.1 | chr2:290973-292496 REVERSE LENGTH=289 153 1e-37
AT1G70690.1 | chr1:26652099-26653381 FORWARD LENGTH=300 149 3e-36
AT3G60720.1 | chr3:22442035-22443608 FORWARD LENGTH=280 134 5e-32
AT5G43980.1 | chr5:17694817-17696458 REVERSE LENGTH=304 89 2e-18
AT1G04520.1 | chr1:1231852-1233787 FORWARD LENGTH=308 77 2e-14
AT2G33330.1 | chr2:14123181-14125028 REVERSE LENGTH=305 76 2e-14
AT5G41290.1 | chr5:16512326-16513500 FORWARD LENGTH=288 68 6e-12
AT1G63550.1 | chr1:23569786-23570890 FORWARD LENGTH=325 66 2e-11
AT5G48540.1 | chr5:19669096-19669887 REVERSE LENGTH=264 65 5e-11
AT1G63590.1 | chr1:23579896-23580702 FORWARD LENGTH=269 59 5e-09
AT1G63570.1 | chr1:23575450-23576304 FORWARD LENGTH=285 54 1e-07
AT5G41280.1 | chr5:16509532-16510729 FORWARD LENGTH=287 54 1e-07
AT4G05200.1 | chr4:2679793-2682309 REVERSE LENGTH=676 54 2e-07
AT1G61750.1 | chr1:22804613-22806318 REVERSE LENGTH=342 53 3e-07
AT4G23310.1 | chr4:12185737-12188763 FORWARD LENGTH=831 50 1e-06
AT1G63560.1 | chr1:23573161-23573940 FORWARD LENGTH=260 50 1e-06
>AT5G37660.2 | chr5:14959842-14961165 FORWARD LENGTH=299
Length = 298
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 5/204 (2%)
Query: 28 FVYAGCSQARYDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVYQCRSD 87
FV+ GCSQ ++ + Y +++++ L++L NSA Y++Y N+T ++S G++QCR D
Sbjct: 37 FVFGGCSQQKFSPASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDTARGLFQCRGD 96
Query: 88 LPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKCGGEG 147
L C CV A +++ LC G +QL C+++Y N SFLG++D TV+ KKCG
Sbjct: 97 LSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGSSE 156
Query: 148 GSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDCVSAAS 207
G +T ++ RD G +RAG +G VQ M QCVGDL C DC+ A
Sbjct: 157 GYNTDGISRRDAVLTELVNGG-----GYFRAGGSGDVQGMGQCVGDLTVSECQDCLGTAI 211
Query: 208 SQLKAGCGYASAGEVYLGKCYARF 231
+LK CG A G+++L KCYAR+
Sbjct: 212 GRLKNDCGTAVFGDMFLAKCYARY 235
>AT2G01660.1 | chr2:290973-292496 REVERSE LENGTH=289
Length = 288
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 121/207 (58%), Gaps = 7/207 (3%)
Query: 28 FVYAGCSQARYDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLV-GVYQCRS 86
F+Y GCSQ +Y G+ Y ++V++ L++ +SA Y N+T+ + + V G+YQCR
Sbjct: 27 FIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFTTNGISGDSSSVYGLYQCRG 86
Query: 87 DLPAAI--CGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKCG 144
DL + C CV A ++L SLC A+G +QL CFV+Y N +FLG +D TV+ ++CG
Sbjct: 87 DLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRRCG 146
Query: 145 GEGGSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDCVS 204
G ++ + RD GSYR G +G +Q ++QC GDL A C DC+
Sbjct: 147 PPVGYNSDEMTRRDSVVGSLAASSG----GSYRVGVSGELQGVAQCTGDLSATECQDCLM 202
Query: 205 AASSQLKAGCGYASAGEVYLGKCYARF 231
A +L+ CG A+ G+VYL KCYAR+
Sbjct: 203 EAIGRLRTDCGGAAWGDVYLAKCYARY 229
>AT1G70690.1 | chr1:26652099-26653381 FORWARD LENGTH=300
Length = 299
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 28 FVYAGCSQARYDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLV--GVYQCR 85
++YA CS A++ + Y ++++ LS+ S T YAN+T P+ + G+YQCR
Sbjct: 31 YIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTVTVYGIYQCR 90
Query: 86 SDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKCGG 145
DL C CV SA ++ +LC+++ +Q+ C +RY N SFLG QD T++ KCG
Sbjct: 91 GDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQ 150
Query: 146 --EGGSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDCV 203
E + D DGSYR G G VQ ++QC GDL C DC+
Sbjct: 151 PMEFNDQDALTKASDVIGSLGTG------DGSYRTGGNGNVQGVAQCSGDLSTSQCQDCL 204
Query: 204 SAASSQLKAGCGYASAGEVYLGKCYARF 231
S A +LK+ CG A G VYL KCYARF
Sbjct: 205 SDAIGRLKSDCGMAQGGYVYLSKCYARF 232
>AT3G60720.1 | chr3:22442035-22443608 FORWARD LENGTH=280
Length = 279
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 10/210 (4%)
Query: 28 FVYAGCSQARYDAGTQYAADVDTALSALTNSAGYTAYANYT----SPSAASGTGLVGVYQ 83
F+Y GCS +Y T + ++ DT LS++ S+ ++ ++ S S++S + + G+YQ
Sbjct: 29 FIYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLYQ 88
Query: 84 CRSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKC 143
CR DL ++ C C++++ ++ +C + GA +QL CF+RY + FLG+ DT++ +KKC
Sbjct: 89 CRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKKC 148
Query: 144 GGEG-GSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDC 202
+ +D RD Y+ +G V+ +QCVGDL CT C
Sbjct: 149 SSKSVENDYDFFKRRDDVLSDLESTQL-----GYKVSRSGLVEGYAQCVGDLSPSDCTAC 203
Query: 203 VSAASSQLKAGCGYASAGEVYLGKCYARFW 232
++ + +LK CG A A EVYL +CYAR+W
Sbjct: 204 LAESVGKLKNLCGSAVAAEVYLAQCYARYW 233
>AT5G43980.1 | chr5:17694817-17696458 REVERSE LENGTH=304
Length = 303
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 14/224 (6%)
Query: 21 GADDYTAFVYAGC-SQARYDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLV 79
G DDY ++ GC +Q D ++ ++ ++L + + +++A+ TS + + T ++
Sbjct: 21 GDDDYKNLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNT-TAVI 79
Query: 80 GVYQCRSDLPAAICGGCVRSAATKLASLCN------SAAGAGVQLRACFVRYGNDSFLGR 133
GV+QCR DL A C CV ++ LC + A V L C++RY + F
Sbjct: 80 GVFQCRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQT 139
Query: 134 QDTTVLFKKCGGEGGSDTGVVAMRDXXXXXXXXXXXXXXDGS------YRAGAAGYVQAM 187
T +LF+ CG + +D G V R+ G + AG V +
Sbjct: 140 SGTEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVL 199
Query: 188 SQCVGDLGAKACTDCVSAASSQLKAGCGYASAGEVYLGKCYARF 231
QC G LG C +CV + K+ CG +++G+VYL KC+ +
Sbjct: 200 GQCEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSY 243
>AT1G04520.1 | chr1:1231852-1233787 FORWARD LENGTH=308
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 5/209 (2%)
Query: 24 DYTAFVYAGCSQARY-DAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVY 82
+YT +Y GC++ ++ D Y+ + +L + + T + Y + + S T + G++
Sbjct: 31 EYTTLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRF--YKTTTGTSTTTITGLF 88
Query: 83 QCRSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKK 142
QCR DL C CV LC + VQL C++ Y F +LFK
Sbjct: 89 QCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLFKT 148
Query: 143 CGGEGGSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDC 202
CG + TG RD + A V + QC GD+G C+ C
Sbjct: 149 CGKNNIAGTGFEERRDTAFGVMQNGVVSGH--GFYATTYESVYVLGQCEGDVGDTDCSGC 206
Query: 203 VSAASSQLKAGCGYASAGEVYLGKCYARF 231
V A + + CG + +G++YL KC+ +
Sbjct: 207 VKNALEKAQVECGSSISGQIYLHKCFIAY 235
>AT2G33330.1 | chr2:14123181-14125028 REVERSE LENGTH=305
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 4/209 (1%)
Query: 22 ADDYTAFVYAGCSQARY-DAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVG 80
+ +YT +Y GC++ R D Y+ + L + T + T+ S T + G
Sbjct: 30 SPEYTNLIYKGCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYK-TTTGTTSQTSVTG 88
Query: 81 VYQCRSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLF 140
++QCR DL C CV LC A VQL C++ Y F +LF
Sbjct: 89 LFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELLF 148
Query: 141 KKCGGEGGSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACT 200
K CG + TG RD + A V + QC GD+G C+
Sbjct: 149 KTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGH--GFYATTYESVYVLGQCEGDIGDSDCS 206
Query: 201 DCVSAASSQLKAGCGYASAGEVYLGKCYA 229
C+ A + + CG + +G++YL KC+
Sbjct: 207 GCIKNALQRAQVECGSSISGQIYLHKCFV 235
>AT5G41290.1 | chr5:16512326-16513500 FORWARD LENGTH=288
Length = 287
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 16/204 (7%)
Query: 40 AGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVYQCRSDLPAAICGGCVRS 99
+ T Y +++T LS L+N + + Y N T+ A+ G++ C D+ C CV++
Sbjct: 42 SNTTYNKNLNTLLSTLSNQSSFANYYNLTTGLASDTVH--GMFLCTGDVNRTTCNACVKN 99
Query: 100 AATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTV--------LFKKCGGEGGS-- 149
A ++A C + A + C VRY + FL +T L K G+ G
Sbjct: 100 ATIEIAKNCTNHREAIIYNVDCMVRYSDKFFLTTLETNPSYWWSSNDLIPKSFGKFGQRL 159
Query: 150 --DTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDCVSAAS 207
G V +R + R ++++ QC DL + CT C+ A
Sbjct: 160 SDKMGEVIVRSSLLSSSFTPYYLM--DTTRFDNLYDLESIVQCTPDLDPRNCTTCLKLAL 217
Query: 208 SQLKAGCGYASAGEVYLGKCYARF 231
+L CG +Y C F
Sbjct: 218 QELTECCGNQVWAFIYTPNCMVSF 241
>AT1G63550.1 | chr1:23569786-23570890 FORWARD LENGTH=325
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 25/220 (11%)
Query: 29 VYAGCSQAR-YDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVYQCRSD 87
++ C+ + + Y + DT L++L S+ Y+N T S + G++ CR D
Sbjct: 32 IFTVCNPTNNFTQTSSYETNRDTLLASLRESSSLGHYSNATE--GLSPDTVHGMFLCRGD 89
Query: 88 LPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSF--------------LGR 133
+ A C CV++A T++AS C A + C VRY N SF L
Sbjct: 90 ITTASCVDCVQTATTEIASNCTLNKRAVIYYDECMVRYSNVSFSSELEIVPSITIYSLRS 149
Query: 134 QDTTVLFKKCGGEGGSDT--GVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCV 191
F + E S+ V + +GSY + M QC
Sbjct: 150 APNPTRFNQTLTEKFSELIFNVSSSSLVPYFVEDQERVTQSEGSYD------LDTMVQCS 203
Query: 192 GDLGAKACTDCVSAASSQLKAGCGYASAGEVYLGKCYARF 231
DL CT C+ A ++ CG S +++ KC RF
Sbjct: 204 PDLDIFNCTVCLRVAFFRISTCCGLPSYAKIFTPKCLLRF 243
>AT5G48540.1 | chr5:19669096-19669887 REVERSE LENGTH=264
Length = 263
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 8/206 (3%)
Query: 34 SQARYDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVYQCRSDLPAAIC 93
+ + A +Q + ++D+ L+ L + + TS S + + G+ QCR D+ C
Sbjct: 30 TNSNISASSQVSKNIDSLLATLVSKTPSKGFKTTTSSSYNNKEKVYGLAQCRGDISNTDC 89
Query: 94 GGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDT---TVLFKKCG----GE 146
C++ AA K+ +C + + + + CF+RY ++F+G+ DT + F
Sbjct: 90 STCIQDAAKKIREVCQNQSDSRILYDFCFLRYSQENFIGKLDTGAGLIYFNVANVTEIDP 149
Query: 147 GGSDTGVVAMRDXXXXXXXXXXXX-XXDGSYRAGAAGYVQAMSQCVGDLGAKACTDCVSA 205
D + A+ D G + + + QC DL C C +
Sbjct: 150 KKFDNELGALFDKIRSEAVLPKNKGLGKGKTKLTPFVTLNGLVQCTRDLSELDCAQCFAT 209
Query: 206 ASSQLKAGCGYASAGEVYLGKCYARF 231
A C V CY R+
Sbjct: 210 AVGSFMTTCHNKKGCRVLYSSCYVRY 235
>AT1G63590.1 | chr1:23579896-23580702 FORWARD LENGTH=269
Length = 268
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 79/214 (36%), Gaps = 26/214 (12%)
Query: 33 CSQARYDAGTQ---YAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVYQCRSDLP 89
C+Q +D T+ Y ++ DT LS L N + +Y+N T+ S + G++ CR DL
Sbjct: 33 CTQ--FDNVTRTSSYLSNRDTVLSTLRNRSSIGSYSNATA--GLSPNTIYGMFLCRGDLN 88
Query: 90 AAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFL---------------GRQ 134
C CV + ++ C A V C VRY N SF
Sbjct: 89 RTSCSDCVNATTLEIYKSCFYRKSALVISNECIVRYSNVSFFTLVEDVPSTARFSTGNSL 148
Query: 135 DTTVLFKKCGGEGGSDTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGY-VQAMSQCVGD 193
D+ F + E + +R Y + AM QC D
Sbjct: 149 DSPQFFSQTLLEK---LDALILRASLSSSLPVPYFVDDQQHVTQLEGSYDLHAMVQCSPD 205
Query: 194 LGAKACTDCVSAASSQLKAGCGYASAGEVYLGKC 227
L + CT C+ A +L C +A ++ KC
Sbjct: 206 LDPRNCTVCLRLAVQRLSGCCSHAQFARIFYTKC 239
>AT1G63570.1 | chr1:23575450-23576304 FORWARD LENGTH=285
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 10/162 (6%)
Query: 80 GVYQCRSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVL 139
G++ CR D+ C CV++AA ++A+ C A + C VRY N SF ++ +
Sbjct: 78 GMFLCRGDINTTSCSDCVQTAAIEIATNCTLNKRAFIYYDECMVRYSNVSFFSEFESKPV 137
Query: 140 FKKCGGEGGSDTGVV--AMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQ--------AMSQ 189
+ ++ + + + Q +M Q
Sbjct: 138 IVRYSLRSAPNSNRFNQTLSNKLDQLIPNVSPSTLIPYFVEDQERVTQLEGSYDLVSMIQ 197
Query: 190 CVGDLGAKACTDCVSAASSQLKAGCGYASAGEVYLGKCYARF 231
C DL CT C+ A + + CG S+ ++ KC R+
Sbjct: 198 CSPDLDPSNCTICLRFAYATVSTCCGVPSSALIFTPKCILRY 239
>AT5G41280.1 | chr5:16509532-16510729 FORWARD LENGTH=287
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 18/192 (9%)
Query: 53 SALTNSAGYTAYANYTSPSAASGTGLV-GVYQCRSDLPAAICGGCVRSAATKLASLCNSA 111
S L+N + ++ANY + + G+ V G++ C D+ C CV++A ++A C +
Sbjct: 56 STLSNQS---SFANYYNLTTGLGSDTVHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNH 112
Query: 112 AGAGVQLRACFVRYGNDSFLGRQDTTV------------LFKKCGGEGGSDTGVVAMRDX 159
A + +C VRY + FL +T + K G G V +R
Sbjct: 113 REAIIYYFSCMVRYSDKFFLSTLETKPNTYWSSDDPIPKSYDKFGQRLSDKMGEVIIRSS 172
Query: 160 XXXXXXXXXXXXXDGSYRAGAAGYVQAMSQCVGDLGAKACTDCVSAASSQLKAGCGYASA 219
++ ++++ QC L K CT C+ A +L CG
Sbjct: 173 LLSSSFTPYYLMDTTTFDNLYD--LESVVQCSPHLDPKNCTTCLKLALQELTQCCGDQLW 230
Query: 220 GEVYLGKCYARF 231
++ KC F
Sbjct: 231 AFIFTPKCLVSF 242
>AT4G05200.1 | chr4:2679793-2682309 REVERSE LENGTH=676
Length = 675
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 10/214 (4%)
Query: 28 FVYAGCSQAR-YDAGTQYAADVDTALSALT--NSAGYTAYANYTSPSAASGTGLVGVYQC 84
++Y C Y + Y ++ T LS+L+ N+A + + N + + GV+ C
Sbjct: 29 YLYHICPNTTTYSRNSSYLTNLRTVLSSLSSPNAAYASLFDNAAAGEENDSNRVYGVFLC 88
Query: 85 RSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKCG 144
R D+ A IC CV AA + C A + C VRY N S +G+
Sbjct: 89 RGDVSAEICRDCVAFAANETLQRCPREKVAVIWYDECMVRYSNQSIVGQMRIRPGVFLTN 148
Query: 145 GEGGSDTGVVAMRDXXXXXXXXXXXXXXDGS--YRAGAAGY-----VQAMSQCVGDLGAK 197
+ ++ V + S + A + + ++ QC DL +
Sbjct: 149 KQNITENQVSRFNESLPALLIDVAVKAALSSRKFATEKANFTVFQTIYSLVQCTPDLTNQ 208
Query: 198 ACTDCVSAASSQLKAGCGYASAGEVYLGKCYARF 231
C C+ + L C + G V C R+
Sbjct: 209 DCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRY 242
>AT1G61750.1 | chr1:22804613-22806318 REVERSE LENGTH=342
Length = 341
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 15/201 (7%)
Query: 38 YDAGTQYAADVDTALSAL---TNSAGYTAYANYTSPSAASGTGLVGVYQCRSDLPAAICG 94
Y + Y +++DT +S L +++ G+ +YA+ +SP+ T + G Y CR D+ ++ C
Sbjct: 40 YTPNSSYKSNLDTLISVLDSQSSNKGFYSYASGSSPT----TTVYGSYLCRGDISSSTCE 95
Query: 95 GCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQD-----TTVLFKKCGGEGGS 149
C+ A+ + C A + CF+RY + D T + +
Sbjct: 96 TCISRASKNVFIWCPVQKEAIIWYEECFLRYSSRKIFSILDQGPFVTWTSYDTTLYQFYF 155
Query: 150 DTGVVAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMS---QCVGDLGAKACTDCVSAA 206
V D + +Y G V ++ QC DL C C+ +A
Sbjct: 156 INTVEYRMDRLIQEAYSSSSYFAEETYHVSYLGEVYDLNGLVQCTPDLNQYDCYRCLKSA 215
Query: 207 SSQLKAGCGYASAGEVYLGKC 227
++ K C VY C
Sbjct: 216 YNETKDCCYGKRFALVYSSNC 236
>AT4G23310.1 | chr4:12185737-12188763 FORWARD LENGTH=831
Length = 830
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 15/215 (6%)
Query: 27 AFVYAGC-SQARYDAGTQYAADVDTALSALTN-SAGY-TAYANYTSPSAASGTGLVGVYQ 83
+VY C S A + + Y ++ T LS L++ SA Y T + N T+ + G++
Sbjct: 140 TYVYHVCPSWATFPRSSTYMTNLITLLSTLSSPSASYSTGFQNATA--GKHPDRVTGLFN 197
Query: 84 CRSDLPAAICGGCVRSAATKLASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTVLFKKC 143
CR D+ +C CV A + ++ C + C +RY N + L +T
Sbjct: 198 CRGDVSPEVCRRCVSFAVNETSTRCPIEKEVTLYYDQCTLRYSNRNILSTSNTNGGIILA 257
Query: 144 GGEGGSDTGVVAMRDXXXXXXXXXXXXXXDGSYR--AGAAGY-----VQAMSQCVGDLGA 196
+ + +D + S R A +A + + + QC DL
Sbjct: 258 NSQNMTSNEQARFKDLVLTTMNQATIAAANSSKRFDARSANFTTLHSLYTLVQCTHDLTR 317
Query: 197 KACTDCVSAASSQLKAGCGYASAGEVYLGKCYARF 231
+ C C+ +QL G+ + C +RF
Sbjct: 318 QDCLSCLQQIINQLPTE---KIGGQFIVPSCSSRF 349
>AT1G63560.1 | chr1:23573161-23573940 FORWARD LENGTH=260
Length = 259
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 77/213 (36%), Gaps = 21/213 (9%)
Query: 38 YDAGTQYAADVDTALSALTNSAGYTAYANYTSPSAASGTGLVGVYQCRSDLPAAICGGCV 97
+ + Y A+ +T LS+L + + Y+N T S + G++ CR DL C CV
Sbjct: 19 FTQTSSYKANRETLLSSLRDRSSLGTYSNATI--GLSPDTVYGMFLCRGDLTKTSCSDCV 76
Query: 98 RSAATKLA--SLCNSAAGAGVQLRACFVRYGNDSF--LGRQDTTVLFKKCGGEGGSDTGV 153
++A ++ + C S A + C VRY N SF L D + K +
Sbjct: 77 KTATLEITKNNNCTSRKTALIFYEECMVRYSNVSFFTLVELDGPYVAKYSLATFPTSLFS 136
Query: 154 VAMRDXXXXXXXXXXXXXXDGSYRAGAAGYVQAMS---------------QCVGDLGAKA 198
+ S A YV+ +S QC DL
Sbjct: 137 SFQQTLSNKVEQLIILIASKSSLSASTPYYVKDISRVNELEGSYTLDTVVQCSPDLDPAN 196
Query: 199 CTDCVSAASSQLKAGCGYASAGEVYLGKCYARF 231
C C+ L C A + YL KC+ ++
Sbjct: 197 CGVCLRLVVKGLSGCCTNARFAQFYLSKCFLKY 229
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,813,419
Number of extensions: 158739
Number of successful extensions: 603
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 606
Number of HSP's successfully gapped: 20
Length of query: 321
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 222
Effective length of database: 8,392,385
Effective search space: 1863109470
Effective search space used: 1863109470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)