BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0252800 Os06g0252800|AK070507
(204 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G45070.1 | chr3:16486378-16487349 REVERSE LENGTH=324 65 2e-11
AT1G13420.1 | chr1:4604871-4605866 FORWARD LENGTH=332 65 3e-11
AT1G28170.1 | chr1:9841332-9842312 FORWARD LENGTH=327 64 4e-11
AT2G03750.1 | chr2:1147968-1149023 REVERSE LENGTH=352 63 9e-11
AT2G27570.1 | chr2:11775329-11776305 FORWARD LENGTH=274 63 1e-10
AT5G43690.1 | chr5:17546273-17547268 FORWARD LENGTH=332 59 1e-09
AT1G13430.1 | chr1:4606530-4607585 FORWARD LENGTH=352 59 2e-09
AT3G45080.1 | chr3:16488716-16489705 REVERSE LENGTH=330 59 2e-09
AT2G03760.1 | chr2:1149475-1150455 REVERSE LENGTH=327 58 3e-09
AT5G07010.1 | chr5:2174960-2176039 REVERSE LENGTH=360 58 3e-09
AT5G07000.1 | chr5:2171651-2172694 REVERSE LENGTH=348 57 7e-09
AT2G14920.1 | chr2:6418199-6419236 FORWARD LENGTH=334 57 1e-08
AT1G18590.1 | chr1:6398634-6399674 FORWARD LENGTH=347 56 1e-08
AT1G74100.1 | chr1:27864489-27865505 REVERSE LENGTH=339 55 2e-08
AT1G74090.1 | chr1:27863003-27864055 FORWARD LENGTH=351 55 3e-08
AT2G03770.1 | chr2:1150871-1151845 REVERSE LENGTH=325 52 2e-07
AT4G26280.1 | chr4:13304721-13305722 REVERSE LENGTH=315 50 9e-07
>AT3G45070.1 | chr3:16486378-16487349 REVERSE LENGTH=324
Length = 323
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 34 IDDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVA 93
I+D ++ ++SSLPS + + Y+G W + A + ++ F P+ D+IVA
Sbjct: 7 IEDLNEETKTLISSLPSDKDFTGKTICK-YQGCWYTHNVLQAVLNFQKSFKPQDTDIIVA 65
Query: 94 SLPKCGTTWLIALTFATMAR 113
S PKCGTTWL ALTFA + R
Sbjct: 66 SFPKCGTTWLKALTFALLHR 85
>AT1G13420.1 | chr1:4604871-4605866 FORWARD LENGTH=332
Length = 331
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 44 MVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCGTTWL 103
++SSLPS ++ + KL Y+G W + + A + + F P+ D+IVAS PK GTTWL
Sbjct: 28 LISSLPSDIDCS-GTKLYKYQGCWYDKDILQAILNFNKNFQPQETDIIVASFPKSGTTWL 86
Query: 104 IALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLEGLFAPVVKRPNSTHSPLRA 163
ALTFA R L NPH+ +P+LE +P+ T P +
Sbjct: 87 KALTFALAQR--------SKHTSDNHPLLTHNPHELVPYLELDLYLKSSKPDLTKLP--S 136
Query: 164 SSTRICHS-LYYRAPRQPLPQ 183
SS R+ + + + A + PL +
Sbjct: 137 SSPRLFSTHMSFDALKVPLKE 157
>AT1G28170.1 | chr1:9841332-9842312 FORWARD LENGTH=327
Length = 326
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 27 ERPAPEGIDDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPR 86
E P+ + D+ ++SSLP ++ + KL Y+G W + + + +R F P+
Sbjct: 3 ETKIPKKLQSDDEENISLISSLPFDVDFD-STKLFKYQGCWYDDKTLQGVLNFQRGFEPQ 61
Query: 87 PDDVIVASLPKCGTTWLIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLEGL 146
D+I+AS PK GTTWL ALT A + R NPH +PFLE
Sbjct: 62 DTDIIIASFPKSGTTWLKALTVALLERSKQKHSSDDHPLLLD------NPHGLVPFLELR 115
Query: 147 FAPVVKRPNST 157
+P+ T
Sbjct: 116 LFTETSKPDLT 126
>AT2G03750.1 | chr2:1147968-1149023 REVERSE LENGTH=352
Length = 351
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 20/152 (13%)
Query: 35 DDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVAS 94
D+ ++++SLPS + + L Y+G W + A + +++ F PR D+I+AS
Sbjct: 37 DNVSQETKNLITSLPSDKDF-MGYGLYNYKGCWYYPNTLQAVLDVQKHFKPRDTDIILAS 95
Query: 95 LPKCGTTWLIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLEGLFAPVVKRP 154
LPK GTTWL +L FA + R NPH +PFLE + P
Sbjct: 96 LPKGGTTWLKSLIFAVVHREKYRGTPQTHPLLLQ------NPHDLVPFLEVELYANSQIP 149
Query: 155 N----------STH---SPLRASSTRICHSLY 173
+ STH LR ++T+ C ++Y
Sbjct: 150 DLAKYSSPMIFSTHMHLQALREATTKACKTVY 181
>AT2G27570.1 | chr2:11775329-11776305 FORWARD LENGTH=274
Length = 273
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 35 DDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVAS 94
DD + ++SSLPS + + + + Y+G W + A + ++ F P+ ++IVAS
Sbjct: 13 DDLSEETKTLISSLPSDKD-STGINVCKYQGCWYTHHFLQAVLNFQKNFKPQDTNIIVAS 71
Query: 95 LPKCGTTWLIALTFATMAR 113
PKCGTTWL ALTF+ + R
Sbjct: 72 FPKCGTTWLKALTFSLVHR 90
>AT5G43690.1 | chr5:17546273-17547268 FORWARD LENGTH=332
Length = 331
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 38 DDHLAD----MVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVA 93
DD+L++ ++SSLP+ + ++ KL Y+G W + A + +R F P+ D+I+A
Sbjct: 13 DDNLSEETKTLISSLPTYQDSHV--KLCKYQGCWYYHNTLQAVINYQRNFQPQDTDIILA 70
Query: 94 SLPKCGTTWLIALTFATMAR 113
S PK GTTWL AL+ A + R
Sbjct: 71 SFPKSGTTWLKALSVAIVER 90
>AT1G13430.1 | chr1:4606530-4607585 FORWARD LENGTH=352
Length = 351
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 44 MVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCGTTWL 103
++SSLP +++ L KL Y+G+W E + + + F P+ D++VAS K GTTWL
Sbjct: 28 LISSLPWEIDY-LGNKLFKYQGYWYYEDVLQSIPNIHSSFQPQETDIVVASFYKSGTTWL 86
Query: 104 IALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLE 144
ALTFA + R L NPH+ +P+LE
Sbjct: 87 KALTFALVQR------SKHSLEDHHHPLLSHNPHEIVPYLE 121
>AT3G45080.1 | chr3:16488716-16489705 REVERSE LENGTH=330
Length = 329
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 44 MVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCGTTWL 103
++SSLPS + + + Y+G W + + ++ F P+ D+IVAS PKCGTTWL
Sbjct: 22 LISSLPSDKN-STGVNVCKYQGCWYTPPILQGVLNFQKNFKPQDTDIIVASFPKCGTTWL 80
Query: 104 IALTFATMAR 113
ALTFA + R
Sbjct: 81 KALTFALVRR 90
>AT2G03760.1 | chr2:1149475-1150455 REVERSE LENGTH=327
Length = 326
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)
Query: 25 ASERPAPEGIDDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFV 84
+S PA G +D ++SSLP K + L ++ ++G W + + + ++RF
Sbjct: 4 SSSVPAYLGDEDLTQETRALISSLP-KEKGWLVSEIYEFQGLWHTQAILQGILICQKRFE 62
Query: 85 PRPDDVIVASLPKCGTTWLIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLE 144
+ D+I+ + PK GTTWL AL FA + R L NPH +PFLE
Sbjct: 63 AKDSDIILVTNPKSGTTWLKALVFALLNR-----HKFPVSSSGNHPLLVTNPHLLVPFLE 117
Query: 145 GLFAPVVKRPNSTHSPL---RASSTRICH 170
G++ + P+ S L R +T I H
Sbjct: 118 GVY---YESPDFDFSSLPSPRLMNTHISH 143
>AT5G07010.1 | chr5:2174960-2176039 REVERSE LENGTH=360
Length = 359
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 40 HLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCG 99
+M+ SLP + L L++GFW + A ++ ++ F +DV++A++PK G
Sbjct: 45 EFQEMLDSLPKERGWRTRY-LYLFQGFWCQAKEIQAIMSFQKHFQSLENDVVLATIPKSG 103
Query: 100 TTWLIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLE 144
TTWL ALTF + R L NPH +PF E
Sbjct: 104 TTWLKALTFTILNR----HRFDPVASSTNHPLFTSNPHDLVPFFE 144
>AT5G07000.1 | chr5:2171651-2172694 REVERSE LENGTH=348
Length = 347
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 32 EGIDDGDDH------LADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVP 85
EG +G + +M+ SLP K L L++GF + A + ++ F
Sbjct: 17 EGKSEGQEEEGLSYEFQEMLDSLP-KERGRRNRYLYLFQGFRCQAKEIQAITSFQKHFQS 75
Query: 86 RPDDVIVASLPKCGTTWLIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLE 144
PDDV++A++PK GTTWL ALTF + R L NPH +PF E
Sbjct: 76 LPDDVVLATIPKSGTTWLKALTFTILTR---HRFDPVSSSSSDHPLLTSNPHDLVPFFE 131
>AT2G14920.1 | chr2:6418199-6419236 FORWARD LENGTH=334
Length = 333
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 44 MVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCGTTWL 103
++SSLP +++ L KL Y G+W +E + + + F P+ D+I+AS K GTTWL
Sbjct: 24 LISSLPWEIDY-LGNKLFNYEGYWYSEDILQSIPNIHTGFQPQETDIILASFYKSGTTWL 82
Query: 104 IALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLE 144
ALTFA + R LH NPH+ +P LE
Sbjct: 83 KALTFALVQR-----SKHSLEDHQHPLLHH-NPHEIVPNLE 117
>AT1G18590.1 | chr1:6398634-6399674 FORWARD LENGTH=347
Length = 346
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 11 VGPVPFEDVDGELPASERPAPEGIDDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAE 70
+ V + + EL +S +P + H +++++LP K Y G W +
Sbjct: 6 INDVVVSESNHELASS---SPSEFEKNQKHYQEIIATLPHKDGWRPKDPFVEYGGHWWLQ 62
Query: 71 IHVPAAVALRRRFVPRPDDVIVASLPKCGTTWLIALTFATMARXXXXXXXXXXXXXXXXX 130
+ + ++ F RP+D V S PK GTTWL ALTFA R
Sbjct: 63 PLLEGLLHAQKFFKARPNDFFVCSYPKTGTTWLKALTFAIANR--------SKFDVSTNP 114
Query: 131 LHRLNPHQCLPFLE 144
L + NPH+ +P++E
Sbjct: 115 LLKRNPHEFVPYIE 128
>AT1G74100.1 | chr1:27864489-27865505 REVERSE LENGTH=339
Length = 338
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Query: 43 DMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCGTTW 102
D +++LP L Y G W E + + F RP D +V S PK GTTW
Sbjct: 27 DFIATLPKSKGWRPDEILTQYGGHWWQECLLEGLFHAKDHFEARPTDFLVCSYPKTGTTW 86
Query: 103 LIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLEGLFA--PVVKRPNSTHSP 160
L ALT+A + R L + NPH+ +P++E FA P V +P
Sbjct: 87 LKALTYAIVNR--------SRYDDAANPLLKRNPHEFVPYVEIDFAFYPTVDVLQDRKNP 138
Query: 161 LRAS 164
L ++
Sbjct: 139 LFST 142
>AT1G74090.1 | chr1:27863003-27864055 FORWARD LENGTH=351
Length = 350
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 69/177 (38%), Gaps = 22/177 (12%)
Query: 34 IDDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVA 93
+ D++S+ P + L Y G+W + + + F RP D +V
Sbjct: 30 FEKNQKRYQDLISTFPHEKGWRPKEPLIEYGGYWWLPSLLEGCIHAQEFFQARPSDFLVC 89
Query: 94 SLPKCGTTWLIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLEGLF-----A 148
S PK GTTWL ALTFA R L + NPH+ +P++E F
Sbjct: 90 SYPKTGTTWLKALTFAIANR--------SRFDDSSNPLLKRNPHEFVPYIEIDFPFFPEV 141
Query: 149 PVVKRPN----STHSPLRASSTRI----CHSLY-YRAPRQPLPQLTPLATEEATKLS 196
V+K STH P + C +Y +R P+ + +E T+L
Sbjct: 142 DVLKDKGNTLFSTHIPYELLPDSVVKSGCKMVYIWREPKDTFISMWTFLHKERTELG 198
>AT2G03770.1 | chr2:1150871-1151845 REVERSE LENGTH=325
Length = 324
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 43 DMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVASLPKCGTTW 102
+++SSLP V L Y+GFW + + ++ F R D+++AS+PK GTTW
Sbjct: 23 ELLSSLPRDRSV-FAEYLYQYQGFWYPPNLLEGVLYSQKHFQARDSDIVLASIPKSGTTW 81
Query: 103 LIALTFATMARXXXXXXXXXXXXXXXXXLHRLNPHQCLPFLEGLFAPVVK---RPNSTHS 159
L +L FA + R L NPH + F+EG R STH
Sbjct: 82 LKSLVFALIHR------QEFQTPLVSHPLLDNNPHTLVTFIEGFHLHTQDTSPRIFSTHI 135
Query: 160 PL 161
P+
Sbjct: 136 PV 137
>AT4G26280.1 | chr4:13304721-13305722 REVERSE LENGTH=315
Length = 314
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 35 DDGDDHLADMVSSLPSKMEVNLPLKLRLYRGFWLAEIHVPAAVALRRRFVPRPDDVIVAS 94
+D + ++SSL S+ L L Y+G W + + +R F P+ D+IVAS
Sbjct: 10 EDLTEETKTLISSLSSEKGY-LGRNLCKYQGSWYYYNFLQGVLNFQRGFKPQDTDIIVAS 68
Query: 95 LPKCGTTWLIALTFATMAR 113
PK GT WL ALT A R
Sbjct: 69 YPKSGTLWLKALTVALFER 87
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,336,400
Number of extensions: 173248
Number of successful extensions: 357
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 351
Number of HSP's successfully gapped: 17
Length of query: 204
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 110
Effective length of database: 8,529,465
Effective search space: 938241150
Effective search space used: 938241150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)