BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0229800 Os06g0229800|AF419099
(810 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01180.1 | chr3:62456-65678 REVERSE LENGTH=793 830 0.0
AT5G24300.1 | chr5:8266934-8270860 FORWARD LENGTH=653 439 e-123
AT1G32900.1 | chr1:11920582-11923506 REVERSE LENGTH=611 338 9e-93
AT4G18240.1 | chr4:10082221-10087044 FORWARD LENGTH=1041 221 1e-57
AT1G11720.2 | chr1:3951597-3956840 FORWARD LENGTH=1095 188 1e-47
>AT3G01180.1 | chr3:62456-65678 REVERSE LENGTH=793
Length = 792
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/499 (76%), Positives = 437/499 (87%)
Query: 312 PLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQDV 371
PLAG NVMNVI+VAAEC+P+ KTGGLGDVAGALPK+LARRGHRVMVVVPRY +YAEA+D+
Sbjct: 294 PLAGANVMNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDL 353
Query: 372 GIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILFCKA 431
G+RK YK AGQD+EV YFHAFIDGVDFVFID+P FRH ++IYGGNR +I+KRM+LFCKA
Sbjct: 354 GVRKRYKVAGQDMEVMYFHAFIDGVDFVFIDSPEFRHLSNNIYGGNRLDILKRMVLFCKA 413
Query: 432 AVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHNIAY 491
AVEVPW+VPCGGV YGDGNL F+ANDWHTALLPVYLKAYYRD+G+M+YTRSVLVIHNIA+
Sbjct: 414 AVEVPWYVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDHGIMKYTRSVLVIHNIAH 473
Query: 492 QGRGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWELKTT 551
QGRGPVD+F Y++LP HYLD FKLYDPVGGEH NIF AGLK ADRV+TVS GY WE+KT
Sbjct: 474 QGRGPVDDFSYVDLPSHYLDSFKLYDPVGGEHFNIFAAGLKAADRVLTVSHGYSWEVKTL 533
Query: 552 EGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAA 611
EGGWGLH+II ENDWK GIVNGID +EWNPE D +L SD Y NY++ +L KP+CKAA
Sbjct: 534 EGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGKPQCKAA 593
Query: 612 LQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQ 671
LQ+ELGL VR DVPLIGFIGRLD QKGVD+I +A+PW+ QDVQLV+LG+GR DLE +L+
Sbjct: 594 LQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGRPDLEEVLR 653
Query: 672 RFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVG 731
+ E Q+ K RGWVGFSVK AHRITAGAD+L+MPSRFEPCGLNQLYAM YGT+PVVHAVG
Sbjct: 654 QMEHQYRDKARGWVGFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNYGTIPVVHAVG 713
Query: 732 GLRDTMSAFDPFEDTGLGWTFDRAEPHKLIEALGHCLETYRKYKESWRGLQVRGMSQDLS 791
GLRDT+ FDP+ +TGLGWTFD AE KLI ALG+CL TYR+YKESW GLQ RGM+QDLS
Sbjct: 714 GLRDTVQQFDPYSETGLGWTFDSAEAGKLIHALGNCLLTYREYKESWEGLQRRGMTQDLS 773
Query: 792 WDHAAELYEEVLVKAKYQW 810
WD+AAE YEEVLV AKY W
Sbjct: 774 WDNAAEKYEEVLVAAKYHW 792
>AT5G24300.1 | chr5:8266934-8270860 FORWARD LENGTH=653
Length = 652
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/517 (45%), Positives = 316/517 (61%), Gaps = 34/517 (6%)
Query: 316 ENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRY-------GDYAEA 368
E V N++ V +E +P+ KTGGLGDV G+LP ALA RGHRVMV+ PRY +YA A
Sbjct: 139 EVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRYLNGTAADKNYARA 198
Query: 369 QDVGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEI---MKRM 425
+D+GIR G EV ++H + DGVD+VF+D + HR + YG ++ R
Sbjct: 199 KDLGIRVTVNCFGGSQEVSFYHEYRDGVDWVFVDHKSY-HRPGNPYGDSKGAFGDNQFRF 257
Query: 426 ILFCKAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLV 485
L C AA E P +P GG YG+ +L FL NDWH L+P+ L A YR G+ + RS+L+
Sbjct: 258 TLLCHAACEAPLVLPLGGFTYGEKSL-FLVNDWHAGLVPILLAAKYRPYGVYKDARSILI 316
Query: 486 IHNIAYQGRGPVDEFPYMELPEHYLDHFKLYDPV--------GGEHANIFGAGLKMADRV 537
IHN+A+QG P + + LP + P GE N+ + +DR+
Sbjct: 317 IHNLAHQGVEPAATYTNLGLPSEWYGAVGWVFPTWARTHALDTGEAVNVLKGAIVTSDRI 376
Query: 538 VTVSPGYLWELKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYT 597
+TVS GY WE+ T EGG+GL D++ +NGI NGI+ EWNP D H+ +Y+
Sbjct: 377 ITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIP----FHYS 432
Query: 598 VASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLV 657
+ S K +CK ALQ+ELGL +R + P+IGFIGRLD QKG+D+I A P + D+Q V
Sbjct: 433 ADDV-SEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFV 491
Query: 658 LLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLY 717
+LGSG E ++ E + K RGWVGF+V ++HRITAG D+L+MPSRFEPCGLNQLY
Sbjct: 492 MLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 551
Query: 718 AMAYGTVPVVHAVGGLRDTMSAFDPF----EDTGLGWTFDRAEPHKLIEALGHCLETYRK 773
AM YGT+PVVH GGLRDT+ F+P+ TG GW F ++ AL TYR+
Sbjct: 552 AMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVSALRLAAATYRE 611
Query: 774 YKESWRGLQVRGMSQDLSWDHAAELYEEVLVKAKYQW 810
YK+SW GL RGM+++ SW++AA YE+V +QW
Sbjct: 612 YKQSWEGLMRRGMTRNYSWENAAVQYEQV-----FQW 643
>AT1G32900.1 | chr1:11920582-11923506 REVERSE LENGTH=611
Length = 610
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 207/514 (40%), Positives = 284/514 (55%), Gaps = 26/514 (5%)
Query: 311 GPLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYAEAQD 370
G + E M+VI + AE PW KTGGLGDV G LP ALA RGHRVM + PRY Y +A D
Sbjct: 76 GKIVCEKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRYDQYKDAWD 135
Query: 371 VGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQ-----DDIYG----GNRQEI 421
+ K + V++FH + GVD VF+D P+F + IYG + +
Sbjct: 136 TCVVVQIKVGDKVENVRFFHCYKRGVDRVFVDHPIFLAKVVGKTGSKIYGPITGVDYNDN 195
Query: 422 MKRMILFCKAAVEVPWHVPCGGVPYGDG----NLVFLANDWHTALLPVYLKAYYRDNGMM 477
R L C+AA+E P + Y G ++VF+ANDWHTALLP YLK+ Y+ G+
Sbjct: 196 QLRFSLLCQAALEAPQVLNLNSSKYFSGPYGEDVVFVANDWHTALLPCYLKSMYQSRGVY 255
Query: 478 QYTRSVLVIHNIAYQGRGPVDEFPYMELPEHYLDHFKLYD----PVGGEHANIFGAGLKM 533
+ V IHNIAYQGR D++ + LP + F D PV G N A +
Sbjct: 256 MNAKVVFCIHNIAYQGRFAFDDYSLLNLPISFKSSFDFMDGYEKPVKGRKINWMKAAILE 315
Query: 534 ADRVVTVSPGYLWELKT-TEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDG 592
A RV+TVSP Y EL + + G LH +R ++GI+NG+D +EWNP D ++
Sbjct: 316 AHRVLTVSPYYAQELISGVDRGVELHKYLRMK--TVSGIINGMDVQEWNPSTDKYID--- 370
Query: 593 YANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQ 652
Y + ++ +KP K ALQ +GL V DVP+IGFIGRL+ QKG DI+ +A+ G
Sbjct: 371 -IKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQKGSDILVEAISKFMGL 429
Query: 653 DVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCG 712
+VQ+V+LG+G++ +E + E + K G F+V +AH ITAGAD +++PSRFEPCG
Sbjct: 430 NVQMVILGTGKKKMEAQILELEEKFPGKAVGVAKFNVPLAHMITAGADFIIVPSRFEPCG 489
Query: 713 LNQLYAMAYGTVPVVHAVGGLRDTMS-AFDPFEDTGLGWTFDRAEPHKLIEALGHCLETY 771
L QL+AM YGTVP+V + GGL DT+ + F + +P +I
Sbjct: 490 LIQLHAMRYGTVPIVASTGGLVDTVKDGYTGFHIGRFNVKCEVVDPDDVIATAKAVTRAV 549
Query: 772 RKYKESWRGLQVRG-MSQDLSWDHAAELYEEVLV 804
Y S V+ M QD SW A L+E+VL+
Sbjct: 550 AVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLL 583
>AT4G18240.1 | chr4:10082221-10087044 FORWARD LENGTH=1041
Length = 1040
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 247/510 (48%), Gaps = 48/510 (9%)
Query: 321 VIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYGDYA-------EAQDVGI 373
V+ +AAE +P K GGLGDV L KAL R+GH V +++P+Y A D +
Sbjct: 544 VVHIAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVV 603
Query: 374 RKYYKAAGQDLEVKYFHAFIDGVDFVFID----APLFRHRQDDIYGGNRQEIMKRMILFC 429
Y+ G+ + K + ++G+ FI+ + F Q YG Q+ +R F
Sbjct: 604 ESYFD--GKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQ--FYG--EQDDFRRFSYFS 657
Query: 430 KAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALL-PVYLKAYYRDNGMMQYTRSVLVIHN 488
+AA+E+ + G P + +DW TA + P+Y Y + R HN
Sbjct: 658 RAALELL--LQSGKKPD-----IIHCHDWQTAFVAPLYWDLYAPKG--LDSARICFTCHN 708
Query: 489 IAYQGRGPVDEFPYMELPEHYLDH-FKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWE 547
YQG E L + L+ ++ D G+ N + ++ V TVSP Y E
Sbjct: 709 FEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQE 768
Query: 548 LKTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPR 607
++T EGG GLH + + K GI+NGID WNP D L+ A + L K
Sbjct: 769 VRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNPATDPFLK----AQFNAKDL-QGKEE 823
Query: 608 CKAALQRELGLEVRDD-VPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG---- 662
K AL+++LGL + PL+G I RL QKGV +I A+ Q VLLGS
Sbjct: 824 NKHALRKQLGLSSAESRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPH 883
Query: 663 -RRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAY 721
+R+ E + Q+F++ + VR + + ++H I A +D+ ++PS FEPCGL Q+ AM Y
Sbjct: 884 IQREFEGIEQQFKSHDH--VRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRY 941
Query: 722 GTVPVVHAVGGLRDTMSAFDPFEDT-----GLGWTFDRAEPHKLIEALGHCLETYRKYKE 776
G++P+ GGL D S FD +DT G+TF A+ AL Y+K +E
Sbjct: 942 GSIPIARKTGGLND--SVFDIDDDTIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEE 999
Query: 777 SWRGLQVRGMSQDLSWDHAAELYEEVLVKA 806
W L + MS D SW +A YEE+ ++
Sbjct: 1000 KWMRLVEKVMSIDFSWGSSATQYEELYTRS 1029
>AT1G11720.2 | chr1:3951597-3956840 FORWARD LENGTH=1095
Length = 1094
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 237/511 (46%), Gaps = 69/511 (13%)
Query: 311 GPLAGENVMNVIVVAAECSPWCKTGGLGDVAGALPKALARRGHRVMVVVPRYG--DYAEA 368
G ++ E ++++ +A E +P K GGLGDV +L +A+ H V +V P+Y +
Sbjct: 638 GGISKEPPLHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFV 697
Query: 369 QDVGIRKYYKAAGQDLEVKYFHAFIDGVDFVFIDAPLFRHRQDDIYGGNRQEIMKRMILF 428
+D+ + Y G E+K +H ++G+ F+D ++ +YG + R F
Sbjct: 698 KDLQFNRSYHWGGT--EIKVWHGKVEGLSVYFLDPQNGLFQRGCVYGC--ADDAGRFGFF 753
Query: 429 CKAAVEVPWHVPCGGVPYGDGNLVFLANDWHTALLPVYLKAYYRDNGMMQYTRSVLVIHN 488
C AA+E + GG + D + +DW +A + K +Y G+++ TR V IHN
Sbjct: 754 CHAALEF---LLQGGF-HPD---ILHCHDWSSAPVSWLFKDHYTQYGLIK-TRIVFTIHN 805
Query: 489 IAYQGRGPVDEFPYMELPEHYLDHFKLYDPVGGEHANIFGAGLKMADRVVTVSPGYLWEL 548
+ + AN G + AD+ TVSP Y E+
Sbjct: 806 LEFG-------------------------------ANAIGKAMTFADKATTVSPTYAKEV 834
Query: 549 KTTEGGWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRC 608
+ +I + +K +GI+NGID W+P D + YT ++ K
Sbjct: 835 AG-------NSVISAHLYKFHGIINGIDPDIWDPYNDNFIP----VPYTSENVVEGKRAA 883
Query: 609 KAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSG-----R 663
K LQ LGL+ D P++G I RL QKG+ +I A+ ++ Q+VLLGS +
Sbjct: 884 KEELQNRLGLK-SADFPVVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQ 942
Query: 664 RDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGT 723
D + + + H + R + + ++H I AGAD +++PS FEPCGL QL AM YG
Sbjct: 943 NDFVNLANQLHSSHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGA 1002
Query: 724 VPVVHAVGGLRDTMSAFDPFEDTGL-------GWTFDRAEPHKLIEALGHCLETYRKYKE 776
VPVV GGL DT+ D ++ G++FD A+ + AL + + +E
Sbjct: 1003 VPVVRKTGGLFDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGRE 1062
Query: 777 SWRGLQVRGMSQDLSWDHAAELYEEVLVKAK 807
+ L M QD SW+ A Y E+ A+
Sbjct: 1063 WFNSLCKTVMEQDWSWNRPALEYLELYHSAR 1093
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,112,459
Number of extensions: 638389
Number of successful extensions: 1637
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1618
Number of HSP's successfully gapped: 6
Length of query: 810
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 703
Effective length of database: 8,173,057
Effective search space: 5745659071
Effective search space used: 5745659071
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)