BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0229000 Os06g0229000|AK063733
(188 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15250.2 | chr5:4950411-4952771 REVERSE LENGTH=710 278 2e-75
AT2G30950.1 | chr2:13174692-13177064 FORWARD LENGTH=696 254 3e-68
AT1G06430.1 | chr1:1960214-1962525 REVERSE LENGTH=686 247 2e-66
AT1G50250.1 | chr1:18614398-18616930 REVERSE LENGTH=717 115 1e-26
AT5G42270.1 | chr5:16902659-16905102 FORWARD LENGTH=705 108 1e-24
AT2G26140.1 | chr2:11131939-11135126 REVERSE LENGTH=718 102 1e-22
AT5G53170.1 | chr5:21563023-21567922 REVERSE LENGTH=807 100 8e-22
AT2G29080.1 | chr2:12489911-12492999 REVERSE LENGTH=810 81 3e-16
AT1G07510.1 | chr1:2305689-2309380 FORWARD LENGTH=814 77 6e-15
AT5G58870.1 | chr5:23770080-23773719 REVERSE LENGTH=807 62 1e-10
AT3G47060.1 | chr3:17332999-17336613 FORWARD LENGTH=803 59 2e-09
AT1G79560.1 | chr1:29926976-29932308 FORWARD LENGTH=1009 52 2e-07
>AT5G15250.2 | chr5:4950411-4952771 REVERSE LENGTH=710
Length = 709
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 151/169 (89%), Gaps = 1/169 (0%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGA 61
VQKVTL+PRGQARGLTWFLPGE DP LVS+QQ+FA IVGGLGGRAAE+V+FGEPE+TTGA
Sbjct: 523 VQKVTLVPRGQARGLTWFLPGE-DPTLVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGA 581
Query: 62 AGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAV 121
AGDLQQVT +AR+MVT FGMSEIGPWAL +PA + DVVLRMLAR+SMSE+LA DID+ V
Sbjct: 582 AGDLQQVTEIARQMVTMFGMSEIGPWALTDPAVKQNDVVLRMLARNSMSEKLAEDIDSCV 641
Query: 122 RTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVD 170
+ I+ +AYEVAK HVR NR AID+LVDVL+EKETL GDEFRAILSE+ D
Sbjct: 642 KKIIGDAYEVAKKHVRNNREAIDKLVDVLLEKETLTGDEFRAILSEYTD 690
>AT2G30950.1 | chr2:13174692-13177064 FORWARD LENGTH=696
Length = 695
Score = 254 bits (648), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 151/175 (86%), Gaps = 2/175 (1%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGA 61
VQKVTLIPRGQARGLTWF+P +DP L+S+QQ+FA IVGGLGGRAAEE++FG+ EVTTGA
Sbjct: 505 VQKVTLIPRGQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGA 563
Query: 62 AGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAV 121
GDLQQ+T +AR+MVT FGMS+IGPW+L + +AQ DV++RM+AR+SMSE+LA DID+AV
Sbjct: 564 VGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQ-SDVIMRMMARNSMSEKLAEDIDSAV 622
Query: 122 RTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVDIGKERR 176
+ + D AYE+A +H++ NR A+D+LV+VL+EKET+GGDEFRAILSE +I E R
Sbjct: 623 KKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPENR 677
>AT1G06430.1 | chr1:1960214-1962525 REVERSE LENGTH=686
Length = 685
Score = 247 bits (631), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 148/175 (84%), Gaps = 2/175 (1%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGA 61
VQKVTLIPRGQARGLTWF+P +DP L+S+QQ+FA IVGGLGGRAAEEV+FGE EVTTGA
Sbjct: 498 VQKVTLIPRGQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGA 556
Query: 62 AGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAV 121
DLQQ+T +A++MVT FGMSEIGPW+L + + Q DV++RM+AR+SMSE+LA DID AV
Sbjct: 557 VSDLQQITGLAKQMVTTFGMSEIGPWSLMDSSEQ-SDVIMRMMARNSMSEKLANDIDTAV 615
Query: 122 RTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVDIGKERR 176
+T+ D+AYE+A + +R NR A+D++V++L+EKET+ GDEFRAILSE +I E R
Sbjct: 616 KTLSDKAYEIALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPENR 670
>AT1G50250.1 | chr1:18614398-18616930 REVERSE LENGTH=717
Length = 716
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 105/169 (62%), Gaps = 8/169 (4%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEE--DPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTT 59
V K+++IPRGQA GLT+F P EE + L SR + + LGGR AEEV+FG+ VTT
Sbjct: 541 VAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTT 600
Query: 60 GAAGDLQQVTRVARRMVTAFGMS-EIGPWALAEPAAQGGDVVL--RMLARSSMSERLAAD 116
GA+ D QV+RVAR+M+ FG S +IG A+ P GG+ + +M ++ S A
Sbjct: 601 GASNDFMQVSRVARQMIERFGFSKKIGQVAVGGP---GGNPFMGQQMSSQKDYSMATADI 657
Query: 117 IDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAIL 165
+DA VR +V++AY+ A + + + +L +L+EKET+ G+EF ++
Sbjct: 658 VDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLF 706
>AT5G42270.1 | chr5:16902659-16905102 FORWARD LENGTH=705
Length = 704
Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEE--DPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTT 59
V K+++IPRGQA GLT+F P EE + L SR + + LGGR AEEV+FG+ VTT
Sbjct: 529 VAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTT 588
Query: 60 GAAGDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDA 119
GA+ D QV+RVAR+MV FG S+ A + M ++ S A +DA
Sbjct: 589 GASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDA 648
Query: 120 AVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAIL 165
VR +V++AY AK + + +L +L+EKET+ G+EF ++
Sbjct: 649 EVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLF 694
>AT2G26140.1 | chr2:11131939-11135126 REVERSE LENGTH=718
Length = 717
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 13/167 (7%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGA 61
V K T++PRG A G+ LP ++D +SR+Q+ A + +GGR AEE++FGE EVT+GA
Sbjct: 503 VHKATIVPRGMALGMVSQLP-DKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGA 561
Query: 62 AGDLQQVTRVARRMVTAFGMS-EIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAA 120
+ DL+Q T++AR MVT FGMS E+G +A G SMS I++
Sbjct: 562 SSDLEQATKLARAMVTKFGMSKEVG--LVAHNYDDNG---------KSMSTETRLLIESE 610
Query: 121 VRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSE 167
V+ ++++AY AK + + L + L++ ETL G + + +L++
Sbjct: 611 VKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD 657
>AT5G53170.1 | chr5:21563023-21567922 REVERSE LENGTH=807
Length = 806
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 95/165 (57%), Gaps = 18/165 (10%)
Query: 2 VQKVTLIPRGQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGA 61
+ K T++PRG A G+ LP ++ + VS++Q+ A + +GGR AEE++FG +TTGA
Sbjct: 637 IHKATIMPRGSALGMVTQLPSNDETS-VSKRQLLARLDVCMGGRVAEELIFGLDHITTGA 695
Query: 62 AGDLQQVTRVARRMVTAFGMSE-IGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAA 120
+ DL Q T +A+ MV++ GMSE IGP + E + S M R IDA
Sbjct: 696 SSDLSQATELAQYMVSSCGMSEAIGPVHIKERPS------------SDMQSR----IDAE 739
Query: 121 VRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAIL 165
V ++ EAYE K+ ++R+ + L + L+E ETL ++ + IL
Sbjct: 740 VVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRIL 784
>AT2G29080.1 | chr2:12489911-12492999 REVERSE LENGTH=810
Length = 809
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 4 KVTLIPRGQAR-GLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAA 62
KVT++PRG A G ++P E L++++Q+F LGGRAAE+V+ G+ ++TGA
Sbjct: 605 KVTIVPRGTAALGFAQYVPNEN--LLMTKEQLFDMTCMTLGGRAAEQVLIGK--ISTGAQ 660
Query: 63 GDLQQVTRVARRMVTAFGMSEIGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAVR 122
DL++VT++ V +G S+ P G D S + A ID VR
Sbjct: 661 NDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDF------SKPYSNKTGAIIDEEVR 714
Query: 123 TIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSE 167
V +AYE V ++ + ++ ++L+EKE L D+ IL E
Sbjct: 715 DWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGE 759
>AT1G07510.1 | chr1:2305689-2309380 FORWARD LENGTH=814
Length = 813
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 15/166 (9%)
Query: 4 KVTLIPRGQAR-GLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAA 62
KVT++PRG A G ++P E L++++Q+F LGGRAAE+V+ G ++TGA
Sbjct: 611 KVTIVPRGTAALGFAQYVPNEN--LLMTKEQLFDMTCMTLGGRAAEQVLIGR--ISTGAQ 666
Query: 63 GDLQQVTRVARRMVTAFGMSE-IGPWALAEPAAQGGDVVLRMLARSSMSERLAADIDAAV 121
DL++VT++ V +G S+ IG + + + S R A ID V
Sbjct: 667 NDLEKVTKMTYAQVAVYGFSDKIGLLSFPQREDE---------FSKPYSNRTGAMIDEEV 717
Query: 122 RTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSE 167
R V +AY+ + ++ + Q+ ++L+EKE L D+ +L E
Sbjct: 718 REWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGE 763
>AT5G58870.1 | chr5:23770080-23773719 REVERSE LENGTH=807
Length = 806
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 2 VQKVTLIPR-GQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTG 60
V+K++++PR G A G T+ P ED L+ ++ +V LGGRAAEEVV+ ++TG
Sbjct: 615 VEKLSILPRSGGALGFTYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSG-RISTG 673
Query: 61 AAGDLQQVTRVARRMVTAFGMSE-IGPWALAEPAAQGGD 98
A D+++ T +A + V +G++E IGP ++A +A G D
Sbjct: 674 ALDDIRRATDMAYKAVAEYGLNEKIGPVSVATLSAGGID 712
>AT3G47060.1 | chr3:17332999-17336613 FORWARD LENGTH=803
Length = 802
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 2 VQKVTLIPR-GQARGLTWFLPGEEDPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTG 60
V+K++++PR G A G T+ P ED L+ ++ +V LGGRAAEEVV+ ++TG
Sbjct: 611 VEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSG-RISTG 669
Query: 61 AAGDLQQVTRVARRMVTAFGMSE-IGPWALA 90
A D+++ T +A + V +G+++ IGP ++A
Sbjct: 670 AFDDIRRATDMAYKAVAEYGLNQKIGPVSVA 700
>AT1G79560.1 | chr1:29926976-29932308 FORWARD LENGTH=1009
Length = 1008
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 7 LIPRGQARGLTWFLPGEE--DPALVSRQQIFAGIVGGLGGRAAEEVVFGEPEVTTGAAGD 64
L+P G+ ++ F P E+ D + + +V GGR AE VVFG+ VT G D
Sbjct: 791 LLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGD-NVTDGGKDD 849
Query: 65 LQQVTRVARRMVTAFGMSEIGPWALAE-------PAAQGGDVVLR-----MLARSSMSER 112
L+++T++AR MV + + +G L + P G+++ + + MS
Sbjct: 850 LEKITKIAREMVISPQSARLGLTQLVKKIGMVDLPDNPDGELIKYRWDHPHVMPAEMSVE 909
Query: 113 LAADIDAAVRTIVDEAYEVAKAHVRRNRAAIDQLVDVLMEKETLGGDE 160
++ + ++E E+A +R NR +D + L+EK + G E
Sbjct: 910 VSELFTRELTRYIEETEELAMNALRANRHILDLITRELLEKSRITGLE 957
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,289,743
Number of extensions: 114392
Number of successful extensions: 378
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 358
Number of HSP's successfully gapped: 12
Length of query: 188
Length of database: 11,106,569
Length adjustment: 93
Effective length of query: 95
Effective length of database: 8,556,881
Effective search space: 812903695
Effective search space used: 812903695
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 108 (46.2 bits)