BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0222900 Os06g0222900|AK109820
(533 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65090.1 | chr5:26004282-26006656 FORWARD LENGTH=530 484 e-137
AT5G04980.2 | chr5:1468575-1470684 REVERSE LENGTH=467 340 1e-93
AT2G32010.1 | chr2:13625344-13628081 FORWARD LENGTH=595 319 2e-87
AT1G05470.1 | chr1:1608558-1611291 REVERSE LENGTH=618 318 3e-87
AT3G63240.1 | chr3:23364411-23366876 REVERSE LENGTH=548 307 1e-83
AT2G37440.1 | chr2:15719230-15721885 FORWARD LENGTH=480 305 5e-83
AT4G18010.1 | chr4:9991194-9994099 REVERSE LENGTH=647 247 1e-65
AT2G01900.1 | chr2:406136-408933 FORWARD LENGTH=418 246 2e-65
AT1G71710.1 | chr1:26973796-26976774 REVERSE LENGTH=665 239 2e-63
AT1G34120.2 | chr1:12426831-12429526 FORWARD LENGTH=591 236 2e-62
AT1G65580.1 | chr1:24377598-24383940 REVERSE LENGTH=1102 130 2e-30
AT2G43900.1 | chr2:18178801-18183823 REVERSE LENGTH=1317 129 6e-30
AT2G31830.2 | chr2:13532737-13537665 REVERSE LENGTH=1174 123 3e-28
AT1G47510.1 | chr1:17435991-17438296 REVERSE LENGTH=335 95 1e-19
AT1G05630.1 | chr1:1682483-1687153 FORWARD LENGTH=1171 84 2e-16
>AT5G65090.1 | chr5:26004282-26006656 FORWARD LENGTH=530
Length = 529
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 250/451 (55%), Positives = 295/451 (65%), Gaps = 15/451 (3%)
Query: 38 LKSASLNCVGSPPRKNNNATQYRMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQ 97
++ +L+ P + R+F+ATWNVGGRTPN LNL+DFL VE + D+Y+ GFQ
Sbjct: 52 IEGLNLSSFDRPMAPTTEIRELRVFLATWNVGGRTPNNDLNLEDFLLVEGTADLYICGFQ 111
Query: 98 EIVPLTAGNVLVLEDNEPAARWLALIHQALNMPQEPADGDXXXXXXXXXXXXXXXXXXXN 157
EIVPL+AGNVLV+EDNEPAA+WLALI QALN P++ +
Sbjct: 112 EIVPLSAGNVLVVEDNEPAAKWLALISQALNKPKQES---------VYSNAAYSASRTTT 162
Query: 158 GARTRRRDAVSRSASGNLFFHTPSLKMLSNSYRVDSALVKTCNCSPEHXXXXXXXXXXXX 217
+ + SR+ S FF P+LK+LS +YRVDS+L+KTCNC
Sbjct: 163 CSSSSCGSEESRAPSSLSFFQRPNLKVLSRNYRVDSSLLKTCNCP---VIDTSVGWEARR 219
Query: 218 XXYLXXXXXXXXXXXXXXXXXXXXXXXXXQCEAXXXXXXXMSYCLIASKQMVGLFLSVWV 277
A MSY LIASKQMVGLFLSVW
Sbjct: 220 SKRFSDPSTDSSNNVEPENFRVHENFLFDDVPATTKMPGQMSYRLIASKQMVGLFLSVWA 279
Query: 278 RKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLCFVCSHLASGEKEGDELRR 337
R+EL+ H+ HLR+D VGRGIMG LGNKGCIAISM+LH TS CFVCSHLASGEKEGDELRR
Sbjct: 280 RRELIPHISHLRLDSVGRGIMGRLGNKGCIAISMSLHQTSFCFVCSHLASGEKEGDELRR 339
Query: 338 NADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGDLNYRMSLSYDETRTLLED 397
NADVAEILK F I+DHDR++WLGDLNYR++L+Y+ETR LLED
Sbjct: 340 NADVAEILKHTQFPKLTKNPNCHAPER---IIDHDRVLWLGDLNYRVALTYEETRVLLED 396
Query: 398 NDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNSDAYAGETAKSKKKRRTPA 457
NDWD LLE+DQL +ER AGRVF G+ EG+I FAPTYKY+ NSDAYAGE KSKKKRRTPA
Sbjct: 397 NDWDTLLERDQLNMERGAGRVFSGFQEGQIFFAPTYKYSQNSDAYAGEMTKSKKKRRTPA 456
Query: 458 WCDRILWQGDGIEQLQYLRGESRFSDHRPVC 488
WCDRILW+G+GIEQL Y+RGESRFSDHRPVC
Sbjct: 457 WCDRILWKGEGIEQLSYIRGESRFSDHRPVC 487
>AT5G04980.2 | chr5:1468575-1470684 REVERSE LENGTH=467
Length = 466
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/232 (68%), Positives = 186/232 (80%), Gaps = 4/232 (1%)
Query: 258 MSYCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTS 317
M Y L+ASKQMVG+FL+VW+RKEL++HV HLR+ V RGIMG LGNKGCIA+S+ L+ TS
Sbjct: 219 MKYGLVASKQMVGIFLTVWMRKELIQHVSHLRISSVTRGIMGCLGNKGCIAVSLQLYKTS 278
Query: 318 LCFVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWL 377
CF+CSHLASGE+EGDE RRN DV EILK+ F I HDR+IWL
Sbjct: 279 FCFICSHLASGEREGDERRRNLDVIEILKNTSF---PRICRTSFTRVPDRITKHDRVIWL 335
Query: 378 GDLNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTH 437
GDLNYR++LSY ET+TLL+ N WD LL KDQL IER+AGRVF+GW+EGKI FAPTYKY++
Sbjct: 336 GDLNYRIALSYSETKTLLDKNAWDTLLNKDQLKIERDAGRVFKGWHEGKIFFAPTYKYSY 395
Query: 438 NSDAYAGETAKSKK-KRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPVC 488
NSDAYAG+T+K KK KRRTPAWCDRILW GDGI QL Y+RGESRFSDHRPVC
Sbjct: 396 NSDAYAGDTSKEKKNKRRTPAWCDRILWHGDGIRQLSYVRGESRFSDHRPVC 447
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 97/191 (50%), Gaps = 50/191 (26%)
Query: 27 SDINYINQRARLKSASLNCVGSPPRKNNNATQ----YRMFVATWNVGGRTPNKRLNLQDF 82
SD YI R++ + + + S +++ TQ R+FVATWNVGG++P+ LNL
Sbjct: 2 SDPLYIFNRSQSEIVVESLLASSNLRSSMPTQQIQSLRVFVATWNVGGKSPHSGLNLDAL 61
Query: 83 LQVEESPDIYVLGFQEIVPLTAGNVLVLEDNEPAARWLALIHQ----------ALNMPQE 132
L V D+YVLGFQEIVPL AGNVLVL DNEPAA+WLA+I+Q P+
Sbjct: 62 LHVHSEFDVYVLGFQEIVPLNAGNVLVLGDNEPAAKWLAMINQSLNKSSSSSGGRLSPKT 121
Query: 133 PADGDXXXXXXXXXXXXXXXXXXXNGARTRRRDAVSRSASGNLFFHTPSLKMLSNSYRVD 192
P+ G +G++FF PSLK +S S+R +
Sbjct: 122 PSFG-----------------------------------AGSMFFAKPSLKKISESFRTE 146
Query: 193 -SALVKTCNCS 202
+K CNCS
Sbjct: 147 CRRKLKICNCS 157
>AT2G32010.1 | chr2:13625344-13628081 FORWARD LENGTH=595
Length = 594
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 146/228 (64%), Positives = 175/228 (76%), Gaps = 3/228 (1%)
Query: 260 YCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLC 319
YCL+ASKQMVG+FL++WV+ EL EHV +++V CVGRG+MG+LGNKG I+ISM LH TS C
Sbjct: 326 YCLVASKQMVGIFLTIWVKSELREHVKNMKVSCVGRGLMGYLGNKGSISISMLLHQTSFC 385
Query: 320 FVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGD 379
FVC+HL SG+KEGDELRRN+DV EILK F IL HDR+IWLGD
Sbjct: 386 FVCTHLTSGQKEGDELRRNSDVMEILKKTRFPRVQSSADEKSPEN---ILQHDRVIWLGD 442
Query: 380 LNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNS 439
LNYR++LSY + L+E +W ALLE DQL IE++ G VF+GWNEGKI F PTYKY++NS
Sbjct: 443 LNYRIALSYRSAKALVEMQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSNNS 502
Query: 440 DAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPV 487
D YAG K+KRRTPAWCDRILW G+G+ QL Y+RGESRFSDHRPV
Sbjct: 503 DRYAGGDLHPKEKRRTPAWCDRILWHGEGLHQLSYVRGESRFSDHRPV 550
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 55 NATQYRMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNE 114
+ + +FVATWNV GR+P + LNL ++L DIYVLGFQEIVPL AGNVL EDN
Sbjct: 87 DVQNHSIFVATWNVAGRSPPEDLNLDEWLHSSAPADIYVLGFQEIVPLNAGNVLGAEDNG 146
Query: 115 PAARWLALIHQALN 128
PA +W +LI + LN
Sbjct: 147 PAKKWHSLIRKTLN 160
>AT1G05470.1 | chr1:1608558-1611291 REVERSE LENGTH=618
Length = 617
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 144/228 (63%), Positives = 175/228 (76%), Gaps = 3/228 (1%)
Query: 260 YCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLC 319
YCL+ASKQMVG+FL++WV+ EL EHV +++V CVGRG+MG+LGNKG I+ISM LH TS C
Sbjct: 349 YCLVASKQMVGVFLTIWVKSELREHVKNMKVSCVGRGLMGYLGNKGSISISMLLHQTSFC 408
Query: 320 FVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGD 379
FVC+HL SG+KEGDEL+RN+DV EILK F IL HDR+IWLGD
Sbjct: 409 FVCTHLTSGQKEGDELKRNSDVMEILKKTRFPRVKSSEEEKSPEN---ILQHDRVIWLGD 465
Query: 380 LNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNS 439
LNYR++LSY + L+E +W ALLE DQL IE++ G VF+GWNEGKI F PTYKY+ NS
Sbjct: 466 LNYRIALSYRSAKALVEMQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFPPTYKYSRNS 525
Query: 440 DAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPV 487
D Y+G+ K+KRRTPAWCDRILW G+G+ QL Y+RGESRFSDHRPV
Sbjct: 526 DRYSGDDLHPKEKRRTPAWCDRILWFGEGLHQLSYVRGESRFSDHRPV 573
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 51/70 (72%)
Query: 59 YRMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNEPAAR 118
Y +FVATWNV GR+P LNL ++L DIYVLGFQEIVPL AGNVL EDN PA +
Sbjct: 92 YSIFVATWNVAGRSPPSDLNLDEWLHSSAPADIYVLGFQEIVPLNAGNVLGAEDNGPAQK 151
Query: 119 WLALIHQALN 128
WL+LI + LN
Sbjct: 152 WLSLIRKTLN 161
>AT3G63240.1 | chr3:23364411-23366876 REVERSE LENGTH=548
Length = 547
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/228 (63%), Positives = 171/228 (75%), Gaps = 3/228 (1%)
Query: 260 YCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLC 319
YCL+ASKQMVG+FL+VWV+ +L + V +L+V CVGRG+MG+LGNKG I+ISM++H TS C
Sbjct: 278 YCLVASKQMVGIFLTVWVKSDLRDSVNNLKVSCVGRGLMGYLGNKGSISISMSVHQTSFC 337
Query: 320 FVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGD 379
FVCSHL SG+KEGDELRRN+DV EIL+ F I +HDR+IWLGD
Sbjct: 338 FVCSHLTSGQKEGDELRRNSDVLEILRKTRFPRVNNAGDDKSPQM---ISEHDRVIWLGD 394
Query: 380 LNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNS 439
LNYR++LSY + L+E DW ALLEKDQL IE+ G VF GW EG I F PTYKY++NS
Sbjct: 395 LNYRIALSYRSAKALVEMRDWRALLEKDQLRIEQRKGCVFEGWKEGTIYFPPTYKYSNNS 454
Query: 440 DAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPV 487
D YAG+ K KRRTPAWCDRILW G GI QL Y+RGESRFSDHRPV
Sbjct: 455 DIYAGDDRLPKAKRRTPAWCDRILWHGSGISQLSYVRGESRFSDHRPV 502
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 50/69 (72%)
Query: 60 RMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNEPAARW 119
R+F ATWNV G++P LNL D+L DIYVLGFQEIVPL AGNVL EDN PA +W
Sbjct: 89 RVFTATWNVAGKSPPSYLNLDDWLHTSPPSDIYVLGFQEIVPLNAGNVLGTEDNGPARKW 148
Query: 120 LALIHQALN 128
++LI + LN
Sbjct: 149 VSLIRRTLN 157
>AT2G37440.1 | chr2:15719230-15721885 FORWARD LENGTH=480
Length = 479
Score = 305 bits (780), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 174/228 (76%), Gaps = 7/228 (3%)
Query: 260 YCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLC 319
Y L ASKQMVG+FL VWVR +L + + +L+V CVGRGIMG+LGNKG ++ISM+LH TSLC
Sbjct: 194 YSLAASKQMVGIFLCVWVRDDLRKRITNLKVSCVGRGIMGYLGNKGSVSISMSLHETSLC 253
Query: 320 FVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGD 379
FVC+HL SGEKEGDELRRN DV EI K F I+DHD++IWLGD
Sbjct: 254 FVCTHLTSGEKEGDELRRNLDVTEIFKRTRFSRSSKDSRPET------IMDHDKVIWLGD 307
Query: 380 LNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNS 439
LNYR+ S D L ++DW++LLEKDQL IE+ AGR+F+GW EGKI FAPTYKY NS
Sbjct: 308 LNYRLRASSD-LHEQLRNHDWESLLEKDQLKIEQRAGRIFKGWEEGKIYFAPTYKYRINS 366
Query: 440 DAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPV 487
D Y +T KSK+KRRTPAWCDRILW+GDG++QL Y+RGES+FSDHRPV
Sbjct: 367 DNYVVQTEKSKEKRRTPAWCDRILWKGDGMKQLWYVRGESKFSDHRPV 414
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 60 RMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNEPAARW 119
+MFV TWNVGG++P++ L+L+D+L+ DIYVLGFQEIVPL AGNVL EDN PAA+W
Sbjct: 84 KMFVGTWNVGGKSPHEGLDLKDWLKSPADADIYVLGFQEIVPLNAGNVLGAEDNGPAAKW 143
Query: 120 LALIHQALN 128
L+LI +ALN
Sbjct: 144 LSLIREALN 152
>AT4G18010.1 | chr4:9991194-9994099 REVERSE LENGTH=647
Length = 646
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/229 (51%), Positives = 147/229 (64%), Gaps = 6/229 (2%)
Query: 260 YCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLC 319
Y I SKQMVG+++SVW+R+ L HV +L+V VG G+MG++GNKG ++ISMTL+ + +C
Sbjct: 389 YVRIVSKQMVGIYVSVWIRRRLRRHVNNLKVSPVGVGLMGYMGNKGSVSISMTLYQSRMC 448
Query: 320 FVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGD 379
FVCSHL SG K+G E RRNADV EI++ F I HD++ W GD
Sbjct: 449 FVCSHLTSGHKDGAEQRRNADVYEIIRRTRFASVLDTDQPRT------IPCHDQVFWFGD 502
Query: 380 LNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNS 439
LNYR+++S E R L+ WD L DQL+ E G VF GW EG I F PTYKY +S
Sbjct: 503 LNYRLNMSDGEVRKLVSQKRWDELKNSDQLIRELRRGHVFDGWREGPIKFPPTYKYEFDS 562
Query: 440 DAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPVC 488
D YAGE + +K+R PAWCDRILW G GI Q Y R E R SDHRPV
Sbjct: 563 DRYAGENLREPEKKRAPAWCDRILWLGKGIRQECYKRSEIRMSDHRPVT 611
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%)
Query: 55 NATQYRMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNE 114
N ++ VATWNV G+ P+ L ++D+L + DIY++GFQE+VPL AGNV ED
Sbjct: 107 NTKDIKVTVATWNVAGKRPSDDLEIEDWLSTDNPSDIYIIGFQEVVPLNAGNVFGAEDRG 166
Query: 115 PAARWLALIHQALN 128
P +W ++I + LN
Sbjct: 167 PIPKWESIIRRTLN 180
>AT2G01900.1 | chr2:406136-408933 FORWARD LENGTH=418
Length = 417
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 156/226 (69%), Gaps = 7/226 (3%)
Query: 263 IASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLCFVC 322
I SKQMVG+ ++VWVR +L ++ + V CVG GIMG LGNKG +++ LH T+ CFVC
Sbjct: 155 IISKQMVGILITVWVRGDLWPYIRYPSVSCVGCGIMGCLGNKGSVSVRFQLHETTFCFVC 214
Query: 323 SHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLGDLNY 382
SHLASG ++ DE +RN+DV EIL + F ILDHDR+I+LGDLNY
Sbjct: 215 SHLASGGRDRDERQRNSDVNEILARSSF------PRGSSLDLPKKILDHDRVIFLGDLNY 268
Query: 383 RMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHNSDAY 442
R+SL ++TR L+E W+ LLE DQL +E G++FRGW EG + FAPTYKY NSD Y
Sbjct: 269 RISLPEEKTRLLVESKKWNILLENDQLRMEIMNGQIFRGWQEGIVKFAPTYKYVPNSDLY 328
Query: 443 AG-ETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPV 487
G T K +K+R PAWCDRI+W G+G++Q +Y RGE++ SDHRPV
Sbjct: 329 YGCITYKKDEKKRAPAWCDRIIWYGNGLKQHEYTRGETKISDHRPV 374
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 59 YRMFVATWNVGGRTPNKRLNLQDFLQVEESP-DIYVLGFQEIVPLTAGNVLVLEDNEPAA 117
Y++FV+TWNVGG P+ L+++D L+ ++P DIYVLGFQE+VPL A NVL ++N+ +
Sbjct: 58 YKVFVSTWNVGGIVPDDGLDMEDLLETHKTPCDIYVLGFQEVVPLRASNVLGSDNNKVST 117
Query: 118 RWLALIHQALNMPQEP 133
+W +LI ALN P
Sbjct: 118 KWNSLIRDALNKRARP 133
>AT1G71710.1 | chr1:26973796-26976774 REVERSE LENGTH=665
Length = 664
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 8/230 (3%)
Query: 259 SYCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSL 318
+Y + SKQMVG+ L++WV++ L +H+ ++RV VG G+MG++GNKG +++SM+++ T
Sbjct: 407 AYVRLVSKQMVGILLTIWVKRSLRKHIQNVRVSTVGVGVMGYIGNKGAVSVSMSINQTFF 466
Query: 319 CFVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLG 378
CF+ +HL +GE+E D+++RNADV EI K F I DH+R+IWLG
Sbjct: 467 CFINTHLTAGEREVDQIKRNADVHEIHKRTVFHSVSALGLPKL------IYDHERIIWLG 520
Query: 379 DLNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHN 438
DLNYR+S SY++TR L+ +W LLE DQL+ E GR F GW+EG + F PTYKY N
Sbjct: 521 DLNYRLSSSYEKTRDLISKREWSKLLEYDQLVKEYRKGRAFDGWSEGTLHFPPTYKYQAN 580
Query: 439 SDAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPVC 488
SD Y K+ K RTPAWCDR+L G G+ + Y R E +FSDHRPV
Sbjct: 581 SDEYTANDGKAPK--RTPAWCDRVLSYGKGMRLVHYRRTEQKFSDHRPVT 628
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 55 NATQYRMFVATWNVGGRTPNKRLNLQDFLQVEESPDIYVLGFQEIVPLTAGNVLVLEDNE 114
N + R+ V TWNVGG +P L++ D++++ + DIYVLG QEIVPL AGN+L ED+
Sbjct: 124 NNKEIRVCVGTWNVGGISPPSDLDIDDWIEINQPADIYVLGLQEIVPLNAGNILGAEDDR 183
Query: 115 PAARWLALIHQALN 128
P A+W +I +ALN
Sbjct: 184 PVAKWEEVIREALN 197
>AT1G34120.2 | chr1:12426831-12429526 FORWARD LENGTH=591
Length = 590
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 154/229 (67%), Gaps = 6/229 (2%)
Query: 259 SYCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSL 318
SY I SKQMVG+FL++WVR+ L +H+ +L V VG GIMG++GNKG +++SM+++ T
Sbjct: 336 SYVRIVSKQMVGVFLTIWVRRNLRKHISNLCVSTVGVGIMGYIGNKGSVSVSMSIYQTPF 395
Query: 319 CFVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXILDHDRMIWLG 378
CF+C+HL+SGEK+ D+ +RN DV EI + F I +H+R+IWLG
Sbjct: 396 CFLCTHLSSGEKDTDQEKRNDDVREIHRRTQF----LPHSLNANELPRSICNHERIIWLG 451
Query: 379 DLNYRMSLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFAPTYKYTHN 438
DLNYR++LSY++T L+ +W L+E DQL E G +F GW+EG + FAPTYKY +
Sbjct: 452 DLNYRINLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWSEGTLDFAPTYKYEID 511
Query: 439 SDAYAGETAKSKKKRRTPAWCDRILWQGDGIEQLQYLRGESRFSDHRPV 487
S+ Y G+ +S K+R PAWCDRI+W G G++ Y R E + SDHRPV
Sbjct: 512 SENYIGDDPESGKRR--PAWCDRIIWNGKGMKLFNYRRNEIKLSDHRPV 558
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 44 NCVGSPPRKNNNATQYRM----------FVATWNVGGRTPNKRLNLQDFLQVEESPDIYV 93
N + P + N+ +RM TWNVGGR P+ L++ +L E DIYV
Sbjct: 80 NVIYRPKLRRRNSETFRMQYIDTKAIRICAGTWNVGGRVPSSDLDIDGWLDTLEPADIYV 139
Query: 94 LGFQEIVPLTAGNVLVLEDNEPAARWLALIHQALNMPQ 131
LG QEIVPL AGN+ +ED++PA W LI ALN Q
Sbjct: 140 LGLQEIVPLNAGNIFGMEDDQPALEWENLIRDALNRVQ 177
>AT1G65580.1 | chr1:24377598-24383940 REVERSE LENGTH=1102
Length = 1101
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 259 SYCLIASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSL 318
S+ + S+Q+ GL + VWVR +L HVG + V G +GNKG + + + ++ L
Sbjct: 618 SFVRVGSRQLAGLLICVWVRHDLKPHVGDVDAAAVPCGFGRAIGNKGAVGVRLRMYDRVL 677
Query: 319 CFVCSHLASGEKEGDELRRNADVAEILKSAHFXXXXXXXXXXXXXXXXXIL--------- 369
CFV H A+ + + RRNAD + ++ F +
Sbjct: 678 CFVNCHFAAHLEAVN--RRNADFDHVYRTMTFSRQSSSLNAGVAGASFGVTMPRGGNALG 735
Query: 370 -----------DHDRMIWLGDLNYRMS-LSYDETRTLLEDNDWDALLEKDQLLIEREAGR 417
+ D +I+LGD NYR+ ++YDETR + +D L EKDQL E EAG
Sbjct: 736 VNTIEARPELSEADMVIFLGDFNYRLDDITYDETRDFISQRCFDWLREKDQLHTEMEAGN 795
Query: 418 VFRGWNEGKICFAPTYKYTHNSDAYAGETAKSKKKRRTPAWCDRILWQ 465
VF+G E I F PTYK+ + AG S +K+R PAWCDRIL++
Sbjct: 796 VFQGMREAIIRFPPTYKFERHQAGLAG--YDSGEKKRIPAWCDRILYR 841
>AT2G43900.1 | chr2:18178801-18183823 REVERSE LENGTH=1317
Length = 1316
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 25/224 (11%)
Query: 263 IASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLCFVC 322
+ S+Q+ GL +S+WVRK L HVG + V V G +GNKG + + + + +CF+
Sbjct: 661 MGSRQLAGLLISLWVRKNLRTHVGDIDVAAVPCGFGRAIGNKGGVGLRIRVFDRIMCFIN 720
Query: 323 SHLASGEKEGDELRRNADVAEILKS--------------------AHFXXXXXXXXXXXX 362
HLA+ + + RRNAD I K+ +H
Sbjct: 721 CHLAAHLEAVN--RRNADFDHIYKTMSFTRSSNAHNAPAAGVSTGSHTTKSANNANVNTE 778
Query: 363 XXXXXILDHDRMIWLGDLNYRM-SLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRG 421
+ + D +++ GD NYR+ +SYDE R + +D L EKDQL E +AGRVF+G
Sbjct: 779 ETKQDLAEADMVVFFGDFNYRLFGISYDEARDFVSQRSFDWLREKDQLRAEMKAGRVFQG 838
Query: 422 WNEGKICFAPTYKYTHNSDAYAGETAKSKKKRRTPAWCDRILWQ 465
E I F PTYK+ + G S +K+R PAWCDR++++
Sbjct: 839 MREAIITFPPTYKFERHRPGLGG--YDSGEKKRIPAWCDRVIFR 880
>AT2G31830.2 | chr2:13532737-13537665 REVERSE LENGTH=1174
Length = 1173
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 107/224 (47%), Gaps = 25/224 (11%)
Query: 263 IASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLCFVC 322
+ S+Q+ GL +S+WVRK + HVG L V V G +GNKG + + + ++ +CFV
Sbjct: 664 MGSRQLAGLLISLWVRKSIRTHVGDLDVAAVPCGFGRAIGNKGGVGLRIRVYDRIMCFVN 723
Query: 323 SHLASGEKEGDELRRNADVAEILKSAHFXXXXXX--------------------XXXXXX 362
HLA+ + RRNAD I +S F
Sbjct: 724 CHLAAHLEA--VTRRNADFNHIYRSMVFSKGQSVYTAAAAGASTSAQALKNNPNTNNSTE 781
Query: 363 XXXXXILDHDRMIWLGDLNYRM-SLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRG 421
+ D + + GD NYR+ ++YDE R + +D L EKDQL E G+VF+G
Sbjct: 782 EEKSHLASADLVAFFGDFNYRLFGITYDEARDFISHRSFDWLREKDQLRQEMNEGKVFQG 841
Query: 422 WNEGKICFAPTYKYTHNSDAYAGETAKSKKKRRTPAWCDRILWQ 465
E I F PTYK+ N G S +K+R PAWCDR++++
Sbjct: 842 MREALITFPPTYKFEKNKPGLGG--YDSGEKKRIPAWCDRVIYR 883
>AT1G47510.1 | chr1:17435991-17438296 REVERSE LENGTH=335
Length = 334
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 40/205 (19%)
Query: 296 GIMGWLG-NKGCIAISMTLHHTSLCFVCSHLASGEKEGDELRRNADVAEILKSAHFXXXX 354
G G +G KG +AI + + F+ HL++ K+ D+ RN ++ I S
Sbjct: 146 GCGGLIGRKKGAVAIRINYDDIKMVFISCHLSAHAKKVDQ--RNTELRHIANS------- 196
Query: 355 XXXXXXXXXXXXXILDHDR-----MIWLGDLNYRMS-LSYDETRTLLEDNDWDALLEKDQ 408
+L D+ +WLGDLNYR+ +S R+L++++ L+ KDQ
Sbjct: 197 -------------LLPRDKRKRDLTVWLGDLNYRIQDVSNHPVRSLIQNHLQSVLVSKDQ 243
Query: 409 LLIEREAGRVFRGWNEGKICFAPTYKYTHNSDAYAGETAKSKKKRRTPAWCDRILWQGDG 468
LL E E G +F+G++EG + F PTYKY S Y + K R PAW DRIL++
Sbjct: 244 LLQEAERGEIFKGYSEGTLGFKPTYKYNVGSSDY-----DTSHKIRVPAWTDRILFKIQD 298
Query: 469 IEQLQ-----YLRGESRF-SDHRPV 487
+ +Q Y + + SDH+PV
Sbjct: 299 TDNIQATLHSYDSIDQVYGSDHKPV 323
>AT1G05630.1 | chr1:1682483-1687153 FORWARD LENGTH=1171
Length = 1170
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 372 DRMIWLGDLNYRM-SLSYDETRTLLEDNDWDALLEKDQLLIEREAGRVFRGWNEGKICFA 430
D + + GD NYR+ ++YDE R + +D L E+DQL E + G+VF+G E I F
Sbjct: 816 DMVAFFGDFNYRLFGITYDEARDFISQRSFDWLRERDQLRAEMKVGKVFQGMREALITFP 875
Query: 431 PTYKYTHNSDAYAGETAKSKKKRRTPAWCDRILWQ 465
PTYK+ N G S +K+R PAWCDR++++
Sbjct: 876 PTYKFERNRSGLGG--YDSGEKKRIPAWCDRVIYR 908
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 263 IASKQMVGLFLSVWVRKELVEHVGHLRVDCVGRGIMGWLGNKGCIAISMTLHHTSLCFVC 322
+ S+Q+ GL +S+W RK++ HVG L V V G +GNKG + + + ++ +CFV
Sbjct: 655 MGSRQLAGLLISLWARKDIRTHVGDLDVAAVPCGFGRAIGNKGGVGLRIRVYDRIMCFVN 714
Query: 323 SHLASGEKEGDELRRNADVAEILKSAHF 350
HLA+ + + RRNAD I + F
Sbjct: 715 CHLAAHLEAVN--RRNADFNHIFRLMVF 740
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,786,226
Number of extensions: 359997
Number of successful extensions: 719
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 691
Number of HSP's successfully gapped: 27
Length of query: 533
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 430
Effective length of database: 8,282,721
Effective search space: 3561570030
Effective search space used: 3561570030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)