BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0220000 Os06g0220000|AK061401
(283 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315 265 2e-71
AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310 254 4e-68
AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306 249 1e-66
AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279 217 7e-57
AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338 121 4e-28
AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324 119 2e-27
AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364 115 3e-26
AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333 112 2e-25
>AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315
Length = 314
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/291 (47%), Positives = 174/291 (59%), Gaps = 22/291 (7%)
Query: 1 HNGAVLSGDIPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXX---XXXXWWGSIHRL 57
H GA+LSG I V+++WYG+F P+Q+A+++DF WW + +
Sbjct: 38 HKGALLSGKISVNLIWYGKFKPSQRAIISDFITSLTHTSPTSKTLHQPSVATWWKTTEKY 97
Query: 58 YLSKXXXXXXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTLAARARPG 117
Y L Q+ DE CSLGKSL ++ TLA++
Sbjct: 98 Y-------------KLATPSKNSSPLSLTLGKQIIDESCSLGKSLTDKKIQTLASKGDQ- 143
Query: 118 KGGVALVLTAQDVAVEGFCMSRCGTHGPVSRAGA-----AYAWVGNSATQCPGQCAWPFH 172
+ + +VLT+ DV V GF MSRCGTHG G AY WVGNS TQCPGQCAWPFH
Sbjct: 144 RNAINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSKFAYIWVGNSETQCPGQCAWPFH 203
Query: 173 QPVYGPQAAPLVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQGERGAALEAATACTX 232
PVYGPQ+ PLV P+ DVG+DGMVIN+AS++AG TNPFG+G+YQG + A LEAA+AC
Sbjct: 204 APVYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPQNAPLEAASACPG 263
Query: 233 XXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACSTLV 283
LLVD TG S+NA+GA+GRK+LLPAL+DP TSACST+V
Sbjct: 264 VYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKFLLPALYDPTTSACSTMV 314
>AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310
Length = 309
Score = 254 bits (648), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/293 (47%), Positives = 174/293 (59%), Gaps = 30/293 (10%)
Query: 1 HNGAVLSGDIPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXX--XXXXWWGSIHRLY 58
H GA+L+GD+ ++++WYG+F P+Q+A+VTDF WW ++ + Y
Sbjct: 35 HKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVATWWKTVEKYY 94
Query: 59 LSKXXXXXXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTLAARARPGK 118
+ L Q+ D+G S+GKSL L LAA K
Sbjct: 95 QFRKMTTTRGLSLS--------------LGEQILDQGYSMGKSLTEKNLKDLAA-----K 135
Query: 119 GG----VALVLTAQDVAVEGFCMSRCGTHGPVSRAGA-----AYAWVGNSATQCPGQCAW 169
GG V +VLT+ DV V+GFCM+RCG+HG S +G AY WVGNS TQCPGQCAW
Sbjct: 136 GGQSYAVNVVLTSADVTVQGFCMNRCGSHGTGSGSGKKGSRFAYIWVGNSETQCPGQCAW 195
Query: 170 PFHQPVYGPQAAPLVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQGERGAALEAATA 229
PFH PVYGPQ+ PLV P+ DVG+DGMVIN+AS++A TNPFGDG+YQG + A LEA +A
Sbjct: 196 PFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLEAGSA 255
Query: 230 CTXXXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACSTL 282
CT LLVD TG SYN G +GRKYLLPALFDP T +CSTL
Sbjct: 256 CTGVYGKGSYPGYAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCSTL 308
>AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306
Length = 305
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/291 (45%), Positives = 166/291 (57%), Gaps = 29/291 (9%)
Query: 1 HNGAVLSGDIPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXX--XXXXWWGSIHRLY 58
HNG +L G+I V+++WYG+FTP Q++V+ DF WW + +
Sbjct: 36 HNGVLLKGNITVNLVWYGKFTPIQRSVIVDFIHSLNSKDVASSAAVPSVASWWKTTEKY- 94
Query: 59 LSKXXXXXXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTLAARARPGK 118
+ Q+ E LGKSLK L L+ + G
Sbjct: 95 --------------------KGGSSTLVVGKQLLLENYPLGKSLKNPYLRALSTKLNGGL 134
Query: 119 GGVALVLTAQDVAVEGFCMSRCGTHGPV----SRA--GAAYAWVGNSATQCPGQCAWPFH 172
+ +VLTA+DV VE FCMSRCGTHG RA GAAY WVGNS TQCPG CAWPFH
Sbjct: 135 RSITVVLTAKDVTVERFCMSRCGTHGSSGSNPRRAANGAAYVWVGNSETQCPGYCAWPFH 194
Query: 173 QPVYGPQAAPLVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQGERGAALEAATACTX 232
QP+YGPQ PLV P+GDVG+DGM+IN+A+++A VTNPF +G+YQG A LEA +AC
Sbjct: 195 QPIYGPQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNGYYQGPPTAPLEAVSACPG 254
Query: 233 XXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACSTLV 283
+LVDK TG+SYNA G GRKYLLPA++DP +S C TLV
Sbjct: 255 IFGSGSYPGYAGRVLVDKTTGSSYNARGLAGRKYLLPAMWDPQSSTCKTLV 305
>AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279
Length = 278
Score = 217 bits (552), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 155/281 (55%), Gaps = 37/281 (13%)
Query: 6 LSGDIPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXXXXXXWWGSIHRLYLSKXXXX 65
L+G+I ++++WYG+FTP Q++++ DF WW + +
Sbjct: 32 LNGNITLNLIWYGKFTPIQRSIIVDFIRSISSVTAAKGPSVAS-WWKTTEKY-------- 82
Query: 66 XXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTLAARARPGKG-GVALV 124
+ Q+ E LGKSLK L L+++ G + +V
Sbjct: 83 -------------KTGVSTLVVGKQLLLENYPLGKSLKSPYLRALSSKLNAGGARSITVV 129
Query: 125 LTAQDVAVEGFCMSRCGTHGPVSRA--GAAYAWVGNSATQCPGQCAWPFHQPVYGPQAAP 182
LTA+DV VEG CM+RCGTHG S + AY WVGNS TQCPG CAWPFHQP+YGPQ+ P
Sbjct: 130 LTAKDVTVEGLCMNRCGTHGSKSSSVNSGAYVWVGNSETQCPGYCAWPFHQPIYGPQSPP 189
Query: 183 LVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQGERGAALEAATACTXXXXXXXXXXX 242
LV P+GDVG+DGM+IN+A+++ VTNP + EA +ACT
Sbjct: 190 LVAPNGDVGVDGMIINIATLLVNTVTNP------------SPEAVSACTGIFGSGAYPGY 237
Query: 243 XXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACSTLV 283
+LVDK +GASYNA G GRKYLLPAL+DP TS C T+V
Sbjct: 238 AGRVLVDKTSGASYNALGLAGRKYLLPALWDPQTSTCKTMV 278
>AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338
Length = 337
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 133/294 (45%), Gaps = 34/294 (11%)
Query: 1 HNGAVLSGDIPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXXXXXXWWGSIHRLYLS 60
H G VL+ +I V +WYG + +QK ++ +F WW ++ +LY
Sbjct: 58 HMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSISAVGSKHPSVSG--WWKTV-QLYTD 114
Query: 61 KXXXXXXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTL-----AARAR 115
+ L + +D S GKSL + ++ +R+R
Sbjct: 115 QTGSNITGTVR---------------LGEEKNDRFYSHGKSLTRLSIQSVIKSAVTSRSR 159
Query: 116 P----GKGGVALVLTAQDVAVEGFCMSRCGTH----GPVSRAGAAYAWVGNSATQCPGQC 167
P K G+ L+LTA DV V+ FC CG H + YAWVGNSA CPG C
Sbjct: 160 PLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYAWVGNSAKLCPGVC 219
Query: 168 AWPFHQPVYGPQAAPLVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQG-ERGAALEA 226
A+PF P + P P+ P+GDVG+DGM+ +A +A TNP + +Y G + A +E
Sbjct: 220 AYPFAVPAFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDPVAPVEI 279
Query: 227 ATACTXXXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACS 280
A C +L D + GA+YN +G R+YL+ L+ S C+
Sbjct: 280 ADLCEGIYGTGGGGSYTGQMLNDHS-GATYNVNGIR-RRYLIQWLWSHVVSYCT 331
>AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324
Length = 323
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 128/296 (43%), Gaps = 35/296 (11%)
Query: 1 HNGAVLSGDI-PVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXXXXXXWWGSIHRLYL 59
H G V+S + + I+WYGR+ P ++++ DF WW ++ RLY
Sbjct: 39 HLGPVISSPVTSLYIIWYGRWNPTHQSIIRDFLYSVSAPAPAQYPSVSN-WWKTV-RLYR 96
Query: 60 SKXXXXXXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTLAARARPGK- 118
+ LSG+ D S G L + ++ A K
Sbjct: 97 DQTGSNITDTLV---------------LSGEFHDSTYSHGSHLTRFSVQSVIRTALTSKL 141
Query: 119 -----GGVALVLTAQDVAVEGFCMSRCGTHG----PVSRAGAAYAWVGNSATQCPGQCAW 169
G+ LVLT+ DV ++ FC + CG H V A YAWVGNS QCP CA+
Sbjct: 142 PLNAVNGLYLVLTSDDVEMQEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQCPEMCAY 201
Query: 170 PFHQPVYGPQA-----APLVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQGERGAA- 223
PF QP P + + PP+G+VG+DGM+ +A +A +NP +G+Y GE A
Sbjct: 202 PFAQPKPFPGSGFVAREKMKPPNGEVGIDGMISVIAHELAEVSSNPMLNGWYGGEDATAP 261
Query: 224 LEAATACTXXXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSAC 279
E A C + D+ YN G GRKYL+ ++D + + C
Sbjct: 262 TEIADLCLGVYGSGGGGGYMGSVYKDRWRNV-YNVKGVKGRKYLIQWVWDLNRNRC 316
>AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364
Length = 363
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 133/295 (45%), Gaps = 34/295 (11%)
Query: 1 HNGAVLSGD-IPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXXXXXXWWGSIHRLYL 59
H G VLS I + ++WYG+++ K+++ DF WW + LY
Sbjct: 82 HMGPVLSSSPINIYVIWYGQWSRPHKSLIRDFLNSISDAKAPSPSVSE--WWRTA-SLYT 138
Query: 60 SKXXXXXXXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSL-KLSQLPTLAARARPG- 117
+ ++G+ SD S G+ L +L+ +A+ AR
Sbjct: 139 DQTGSNVSRSVL---------------IAGEYSDSKYSHGQHLTRLTIQEVIASAARSAS 183
Query: 118 -----KGGVALVLTAQDVAVEGFCMSRCGTHGPV--SRAGAA--YAWVGNSATQCPGQCA 168
K G+ LVLT+ DV ++ FC + CG H S G YAWVG S QCP CA
Sbjct: 184 FPVDHKNGMYLVLTSHDVTMQDFCRAVCGFHYFTFPSMVGYTMPYAWVGQSGKQCPEVCA 243
Query: 169 WPFHQPVYGPQAAP--LVPPSGDVGMDGMVINVASMVAGAVTNPFGDGFYQGERGAA-LE 225
+PF P Y P L PP+G+ G+DGMV + +A V+NP + +Y GE A E
Sbjct: 244 YPFALPGYMGHGGPGELRPPNGETGVDGMVSVIGHELAEVVSNPLINAWYAGEDPTAPTE 303
Query: 226 AATACTXXXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACS 280
C ++ D+ G ++N +G GRK+L+ +++P+ ACS
Sbjct: 304 IGDLCEGLYGSGGGGGYIGQVMRDRE-GKTFNMNGKGGRKFLVQWIWNPNLKACS 357
>AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333
Length = 332
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 117/298 (39%), Gaps = 26/298 (8%)
Query: 7 SGDIPVSILWYGRFTPAQKAVVTDFXXXXXXXXXXXXXXXXXXWWGSIHRLYLSKXXXXX 66
+G + +S+LWYG+FTP QK V DF WW + Y +
Sbjct: 36 NGTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKEGLDPKVSAWWKVVES-YQERFEVKD 94
Query: 67 XXXXXXXXXXXXXXXXXXXXLSGQVSDEGCSLGKSLKLSQLPTLAARARPGKGGVA-LVL 125
S DE GK L + L A V +VL
Sbjct: 95 IYRQKKSNRTVAPRIKVKVVRS--YVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPVVL 152
Query: 126 TAQDVAVEG--FCMSRCGTHGPVSRAGAA----YAWVGNSATQCPGQCAWPFHQPVYGPQ 179
+ V G FC C + G Y V N +CPG+CAWPFH GP+
Sbjct: 153 LSAQVRAHGVGFCDGTCQHNALAKIKGQKEPRRYIMVSNPEVECPGECAWPFHTADKGPR 212
Query: 180 AAPLVPPSGDVGMDGMVINVASMVAGAVTN-------------PFGDGFYQGERGAAL-- 224
P SG+VG D +VI +A+ +A TN P+ D + +++
Sbjct: 213 GMTYQPASGEVGADALVIQLATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESSSMYI 272
Query: 225 -EAATACTXXXXXXXXXXXXXXLLVDKATGASYNAHGAHGRKYLLPALFDPDTSACST 281
+ AT CT + VD TG ++N+HG + K+L+P+++DP T +C T
Sbjct: 273 VDPATKCTRVFGSGAFPGFTGRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSCWT 330
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,882,528
Number of extensions: 156782
Number of successful extensions: 317
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 299
Number of HSP's successfully gapped: 10
Length of query: 283
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 186
Effective length of database: 8,447,217
Effective search space: 1571182362
Effective search space used: 1571182362
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)