BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0219900 Os06g0219900|AK058704
(314 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306 273 1e-73
AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279 249 2e-66
AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315 242 2e-64
AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310 238 3e-63
AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333 133 1e-31
AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338 107 7e-24
AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324 100 2e-21
AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364 96 2e-20
>AT5G64260.1 | chr5:25703980-25704897 FORWARD LENGTH=306
Length = 305
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/281 (48%), Positives = 172/281 (61%), Gaps = 3/281 (1%)
Query: 37 LVKPDPIVLKDHHGVVLSGNVTVNVLYYGRFTPAQRAVVAGFVRSASA---AQHPRVPSV 93
LV+ P+V+K H+GV+L GN+TVN+++YG+FTP QR+V+ F+ S ++ A VPSV
Sbjct: 25 LVEEQPLVMKYHNGVLLKGNITVNLVWYGKFTPIQRSVIVDFIHSLNSKDVASSAAVPSV 84
Query: 94 AAWWSTTSXXXXXXXXXXXXMQVMDERMSLGRSLSLDNVTALTRAAGHHRGAVTAVLTAP 153
A+WW TT Q++ E LG+SL + AL+ ++T VLTA
Sbjct: 85 ASWWKTTEKYKGGSSTLVVGKQLLLENYPLGKSLKNPYLRALSTKLNGGLRSITVVLTAK 144
Query: 154 DVLVAPFCMSRCXXXXXXXXXXXXXXXXXXXLWAGNPAQQCPGQCAWPFHQPVYGPQAPP 213
DV V FCMSRC +W GN QCPG CAWPFHQP+YGPQ PP
Sbjct: 145 DVTVERFCMSRCGTHGSSGSNPRRAANGAAYVWVGNSETQCPGYCAWPFHQPIYGPQTPP 204
Query: 214 LVPPNGDVGVDGMVISLAALLAGTVTNPFXXXXXXXXXXXXXXXXXXXXXVFGSGAFPGY 273
LV PNGDVGVDGM+I+LA LLA TVTNPF +FGSG++PGY
Sbjct: 205 LVAPNGDVGVDGMIINLATLLANTVTNPFNNGYYQGPPTAPLEAVSACPGIFGSGSYPGY 264
Query: 274 PGKLLKDPVTGASYNAVGLAGRKYLLPALWDPTTSQCKTLV 314
G++L D TG+SYNA GLAGRKYLLPA+WDP +S CKTLV
Sbjct: 265 AGRVLVDKTTGSSYNARGLAGRKYLLPAMWDPQSSTCKTLV 305
>AT5G09440.1 | chr5:2938397-2939233 FORWARD LENGTH=279
Length = 278
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/264 (48%), Positives = 162/264 (61%), Gaps = 19/264 (7%)
Query: 53 LSGNVTVNVLYYGRFTPAQRAVVAGFVRSASAAQHPRVPSVAAWWSTTSXXXXXXXXXXX 112
L+GN+T+N+++YG+FTP QR+++ F+RS S+ + PSVA+WW TT
Sbjct: 32 LNGNITLNLIWYGKFTPIQRSIIVDFIRSISSVTAAKGPSVASWWKTTEKYKTGVSTLVV 91
Query: 113 XMQVMDERMSLGRSLSLDNVTALTRA--AGHHRGAVTAVLTAPDVLVAPFCMSRCXXXXX 170
Q++ E LG+SL + AL+ AG R ++T VLTA DV V CM+RC
Sbjct: 92 GKQLLLENYPLGKSLKSPYLRALSSKLNAGGAR-SITVVLTAKDVTVEGLCMNRCGTHGS 150
Query: 171 XXXXXXXXXXXXXXLWAGNPAQQCPGQCAWPFHQPVYGPQAPPLVPPNGDVGVDGMVISL 230
+W GN QCPG CAWPFHQP+YGPQ+PPLV PNGDVGVDGM+I++
Sbjct: 151 KSSSVNSGAY----VWVGNSETQCPGYCAWPFHQPIYGPQSPPLVAPNGDVGVDGMIINI 206
Query: 231 AALLAGTVTNPFXXXXXXXXXXXXXXXXXXXXXVFGSGAFPGYPGKLLKDPVTGASYNAV 290
A LL TVTNP +FGSGA+PGY G++L D +GASYNA+
Sbjct: 207 ATLLVNTVTNP------------SPEAVSACTGIFGSGAYPGYAGRVLVDKTSGASYNAL 254
Query: 291 GLAGRKYLLPALWDPTTSQCKTLV 314
GLAGRKYLLPALWDP TS CKT+V
Sbjct: 255 GLAGRKYLLPALWDPQTSTCKTMV 278
>AT4G08950.1 | chr4:5740378-5741322 FORWARD LENGTH=315
Length = 314
Score = 242 bits (617), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 167/295 (56%), Gaps = 15/295 (5%)
Query: 33 RMLFLVKPDPI-VLKDHHGVVLSGNVTVNVLYYGRFTPAQRAVVAGFVRSAS----AAQH 87
R L +P+ +LK H G +LSG ++VN+++YG+F P+QRA+++ F+ S + ++
Sbjct: 22 RNLASQEPNQFQLLKYHKGALLSGKISVNLIWYGKFKPSQRAIISDFITSLTHTSPTSKT 81
Query: 88 PRVPSVAAWWSTTSXXXXXXXXXXXX--------MQVMDERMSLGRSLSLDNVTALTRAA 139
PSVA WW TT Q++DE SLG+SL+ + L +
Sbjct: 82 LHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGKQIIDESCSLGKSLTDKKIQTLA-SK 140
Query: 140 GHHRGAVTAVLTAPDVLVAPFCMSRCXXXXXXXXXXXXXXXXXXXLWAGNPAQQCPGQCA 199
G R A+ VLT+ DV V F MSRC +W GN QCPGQCA
Sbjct: 141 GDQRNAINVVLTSADVTVTGFGMSRCGTHGHARGLGKRGSKFAY-IWVGNSETQCPGQCA 199
Query: 200 WPFHQPVYGPQAPPLVPPNGDVGVDGMVISLAALLAGTVTNPFXXXXXXXXXXXXXXXXX 259
WPFH PVYGPQ+PPLV PN DVG+DGMVI+LA+LLAGT TNPF
Sbjct: 200 WPFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLLAGTATNPFGNGYYQGPQNAPLEAAS 259
Query: 260 XXXXVFGSGAFPGYPGKLLKDPVTGASYNAVGLAGRKYLLPALWDPTTSQCKTLV 314
V+G GA+PGY G LL D TG S+NA G GRK+LLPAL+DPTTS C T+V
Sbjct: 260 ACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKFLLPALYDPTTSACSTMV 314
>AT1G35140.1 | chr1:12852089-12853018 FORWARD LENGTH=310
Length = 309
Score = 238 bits (607), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/283 (43%), Positives = 160/283 (56%), Gaps = 12/283 (4%)
Query: 41 DPIVLKDHHGVVLSGNVTVNVLYYGRFTPAQRAVVAGFVRSASAAQHPRV---PSVAAWW 97
D + H G +L+G+V++N+++YG+F P+QRA+V FV S S+++ + PSVA WW
Sbjct: 28 DYTSFQYHKGALLTGDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVATWW 87
Query: 98 STTSXXXXXXXXXXXX-------MQVMDERMSLGRSLSLDNVTALTRAAGHHRGAVTAVL 150
T Q++D+ S+G+SL+ N+ L A G AV VL
Sbjct: 88 KTVEKYYQFRKMTTTRGLSLSLGEQILDQGYSMGKSLTEKNLKDLA-AKGGQSYAVNVVL 146
Query: 151 TAPDVLVAPFCMSRCXXXXXXXXXXXXXXXXXXXLWAGNPAQQCPGQCAWPFHQPVYGPQ 210
T+ DV V FCM+RC +W GN QCPGQCAWPFH PVYGPQ
Sbjct: 147 TSADVTVQGFCMNRCGSHGTGSGSGKKGSRFAY-IWVGNSETQCPGQCAWPFHAPVYGPQ 205
Query: 211 APPLVPPNGDVGVDGMVISLAALLAGTVTNPFXXXXXXXXXXXXXXXXXXXXXVFGSGAF 270
+PPLV PN DVG+DGMVI+LA+L+A T TNPF V+G G++
Sbjct: 206 SPPLVAPNNDVGLDGMVINLASLMAATATNPFGDGYYQGPKTAPLEAGSACTGVYGKGSY 265
Query: 271 PGYPGKLLKDPVTGASYNAVGLAGRKYLLPALWDPTTSQCKTL 313
PGY G+LL D TG SYN GL GRKYLLPAL+DP T C TL
Sbjct: 266 PGYAGELLVDATTGGSYNVKGLNGRKYLLPALFDPKTDSCSTL 308
>AT3G02970.1 | chr3:669217-670495 REVERSE LENGTH=333
Length = 332
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 124/297 (41%), Gaps = 40/297 (13%)
Query: 54 SGNVTVNVLYYGRFTPAQRAVVAGFVRSAS-AAQHPRVPSVAAWWSTTSXXXXXXXXXXX 112
+G + +++L+YG+FTP Q+ V F+ S + A+ P V+AWW
Sbjct: 36 NGTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKEGLDPKVSAWWKVVESYQERFEVKDI 95
Query: 113 XMQ------------------VMDERMSLGRSLSLDNVTALTRAA-GHHRGAVTAVLTAP 153
Q +DE+M G+ L++ N L A G+ V VL +
Sbjct: 96 YRQKKSNRTVAPRIKVKVVRSYVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPVVLLSA 155
Query: 154 DVLV--APFCMSRCXXXXXXXXXXXXXXXXXXXLWAGNPAQQCPGQCAWPFHQPVYGPQA 211
V FC C + NP +CPG+CAWPFH GP+
Sbjct: 156 QVRAHGVGFCDGTCQHNALAKIKGQKEPRRY--IMVSNPEVECPGECAWPFHTADKGPRG 213
Query: 212 PPLVPPNGDVGVDGMVISLAALLAGTVTNPFXXXXXXXXXXXXXXXXXXX---------- 261
P +G+VG D +VI LA LA TNP
Sbjct: 214 MTYQPASGEVGADALVIQLATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESSSMYIV 273
Query: 262 ------XXVFGSGAFPGYPGKLLKDPVTGASYNAVGLAGRKYLLPALWDPTTSQCKT 312
VFGSGAFPG+ G++ DP+TG ++N+ G+ K+L+P++WDP T C T
Sbjct: 274 DPATKCTRVFGSGAFPGFTGRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSCWT 330
>AT5G51550.1 | chr5:20939793-20940806 REVERSE LENGTH=338
Length = 337
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 123/295 (41%), Gaps = 18/295 (6%)
Query: 30 FNPRMLFLVKPDPIVLKDHHGVVLSGNVTVNVLYYGRFTPAQRAVVAGFVRSASAAQHPR 89
F+ F + + L+ H G VL+ N+TV+ ++YG + +Q+ ++ F+ S SA +
Sbjct: 40 FDASKKFEGSSNLVRLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSISAVG-SK 98
Query: 90 VPSVAAWWSTTSXXXXXXXXXXXXM-----QVMDERMSLGRSLSLDNVTALTRAAGHHRG 144
PSV+ WW T + D S G+SL+ ++ ++ ++A R
Sbjct: 99 HPSVSGWWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTRLSIQSVIKSAVTSRS 158
Query: 145 ---------AVTAVLTAPDVLVAPFCMSRCXXXXXXXXXXXXXXXXXXXLWAGNPAQQCP 195
+ +LTA DV V FC C W GN A+ CP
Sbjct: 159 RPLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYA--WVGNSAKLCP 216
Query: 196 GQCAWPFHQPVYGPQAPPLVPPNGDVGVDGMVISLAALLAGTVTNPFXXXXXXXXXXXXX 255
G CA+PF P + P P+ PNGDVGVDGM+ +A +A TNP
Sbjct: 217 GVCAYPFAVPAFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDPVAP 276
Query: 256 XXXXXXXXVFGSGAFPGYPGKLLKDPVTGASYNAVGLAGRKYLLPALWDPTTSQC 310
G + + +GA+YN G+ R+YL+ LW S C
Sbjct: 277 VEIADLCEGIYGTGGGGSYTGQMLNDHSGATYNVNGIR-RRYLIQWLWSHVVSYC 330
>AT2G35150.1 | chr2:14817220-14818191 REVERSE LENGTH=324
Length = 323
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 127/318 (39%), Gaps = 19/318 (5%)
Query: 10 MRPLLCYIIVVAVAPAGCAAFNPRMLFLVKPDPIVLKDHHGVVLSGNVT-VNVLYYGRFT 68
M ++ + + + F+ + D + L+ H G V+S VT + +++YGR+
Sbjct: 1 MSLIIVFFFFSLLLTSNGQFFDESKNYEGSSDLVDLQYHLGPVISSPVTSLYIIWYGRWN 60
Query: 69 PAQRAVVAGFVRSASAAQHPRVPSVAAWWSTTSXXXXXXXXXXXXMQVM-----DERMSL 123
P ++++ F+ S SA + PSV+ WW T V+ D S
Sbjct: 61 PTHQSIIRDFLYSVSAPAPAQYPSVSNWWKTVRLYRDQTGSNITDTLVLSGEFHDSTYSH 120
Query: 124 GRSLSLDNVTALTRAAGHHRGAVTA------VLTAPDVLVAPFCMSRCXXXXXXXXXXXX 177
G L+ +V ++ R A + + A VLT+ DV + FC + C
Sbjct: 121 GSHLTRFSVQSVIRTALTSKLPLNAVNGLYLVLTSDDVEMQEFCRAICGFHYFTFPSVVG 180
Query: 178 XXXXXXXLWAGNPAQQCPGQCAWPFHQPVYGPQA-----PPLVPPNGDVGVDGMVISLAA 232
W GN +QCP CA+PF QP P + + PPNG+VG+DGM+ +A
Sbjct: 181 ATVPYA--WVGNSERQCPEMCAYPFAQPKPFPGSGFVAREKMKPPNGEVGIDGMISVIAH 238
Query: 233 LLAGTVTNPFXXXXXXXXXXXXXXXXXXXXXVFGSGAFPGYPGKLLKDPVTGASYNAVGL 292
LA +NP G + YN G+
Sbjct: 239 ELAEVSSNPMLNGWYGGEDATAPTEIADLCLGVYGSGGGGGYMGSVYKDRWRNVYNVKGV 298
Query: 293 AGRKYLLPALWDPTTSQC 310
GRKYL+ +WD ++C
Sbjct: 299 KGRKYLIQWVWDLNRNRC 316
>AT2G17230.1 | chr2:7494892-7495983 REVERSE LENGTH=364
Length = 363
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 18/283 (6%)
Query: 43 IVLKDHHGVVLSGN-VTVNVLYYGRFTPAQRAVVAGFVRSASAAQHPRVPSVAAWWSTTS 101
+ L+ H G VLS + + + V++YG+++ ++++ F+ S S A+ P PSV+ WW T S
Sbjct: 77 VHLRYHMGPVLSSSPINIYVIWYGQWSRPHKSLIRDFLNSISDAKAPS-PSVSEWWRTAS 135
Query: 102 XXXXXXXXXXXXM-----QVMDERMSLGRSLSLDNVTALTRAAGH-------HRGAVTAV 149
+ D + S G+ L+ + + +A H+ + V
Sbjct: 136 LYTDQTGSNVSRSVLIAGEYSDSKYSHGQHLTRLTIQEVIASAARSASFPVDHKNGMYLV 195
Query: 150 LTAPDVLVAPFCMSRCXXXXXXXXXXXXXXXXXXXLWAGNPAQQCPGQCAWPFHQPVYGP 209
LT+ DV + FC + C W G +QCP CA+PF P Y
Sbjct: 196 LTSHDVTMQDFCRAVCGFHYFTFPSMVGYTMPYA--WVGQSGKQCPEVCAYPFALPGYMG 253
Query: 210 QAPP--LVPPNGDVGVDGMVISLAALLAGTVTNPFXXXXXXXXXXXXXXXXXXXXXVFGS 267
P L PPNG+ GVDGMV + LA V+NP
Sbjct: 254 HGGPGELRPPNGETGVDGMVSVIGHELAEVVSNPLINAWYAGEDPTAPTEIGDLCEGLYG 313
Query: 268 GAFPGYPGKLLKDPVTGASYNAVGLAGRKYLLPALWDPTTSQC 310
G + G ++N G GRK+L+ +W+P C
Sbjct: 314 SGGGGGYIGQVMRDREGKTFNMNGKGGRKFLVQWIWNPNLKAC 356
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,728,075
Number of extensions: 192651
Number of successful extensions: 477
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 447
Number of HSP's successfully gapped: 9
Length of query: 314
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 216
Effective length of database: 8,419,801
Effective search space: 1818677016
Effective search space used: 1818677016
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 112 (47.8 bits)