BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0219600 Os06g0219600|AK060429
(204 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G10350.1 | chr5:3255674-3257746 REVERSE LENGTH=218 212 1e-55
AT5G65260.1 | chr5:26080501-26082984 REVERSE LENGTH=221 211 2e-55
AT5G51120.2 | chr5:20779760-20781241 FORWARD LENGTH=266 176 6e-45
AT3G12640.1 | chr3:4014455-4017675 FORWARD LENGTH=639 67 8e-12
AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610 59 2e-09
AT2G24350.1 | chr2:10361239-10364223 FORWARD LENGTH=538 57 5e-09
AT3G50670.1 | chr3:18826476-18829492 REVERSE LENGTH=428 55 2e-08
AT2G16940.2 | chr2:7342869-7347052 REVERSE LENGTH=611 54 4e-08
AT3G52380.1 | chr3:19421619-19422855 FORWARD LENGTH=330 54 5e-08
AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309 54 6e-08
AT3G55460.1 | chr3:20561024-20563502 FORWARD LENGTH=263 54 7e-08
AT4G10610.1 | chr4:6557336-6559143 FORWARD LENGTH=337 54 8e-08
AT1G74230.1 | chr1:27915346-27916857 FORWARD LENGTH=290 53 1e-07
AT1G53650.1 | chr1:20029262-20031243 REVERSE LENGTH=315 52 2e-07
AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663 50 6e-07
AT5G06210.1 | chr5:1878497-1879515 FORWARD LENGTH=147 50 1e-06
AT4G19610.1 | chr4:10677482-10681623 FORWARD LENGTH=817 49 2e-06
AT3G14450.1 | chr3:4849788-4851601 FORWARD LENGTH=328 49 2e-06
AT1G01080.2 | chr1:45503-46789 REVERSE LENGTH=295 49 2e-06
AT3G18610.1 | chr3:6404270-6407822 REVERSE LENGTH=637 48 4e-06
AT1G71800.1 | chr1:26999606-27001850 FORWARD LENGTH=462 47 5e-06
AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246 47 7e-06
>AT5G10350.1 | chr5:3255674-3257746 REVERSE LENGTH=218
Length = 217
Score = 212 bits (539), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 132/179 (73%), Gaps = 11/179 (6%)
Query: 1 MADEEHEVYGQEIPLDGE------DVDMGAPGDEAAKMQELDXXXXXXXXXXXXANALRE 54
M +EEHEVYG EIP G+ D+DM A ++A + EL A ALRE
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDA--VTELAEMKRRLKEMEEEAAALRE 58
Query: 55 MQTKVAKEMQGL-DPN--ASSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRV 111
MQ KV KEM DP A++ E KEE+DARSVYVGNVDYACTPEEVQ HF +CGTVNRV
Sbjct: 59 MQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRV 118
Query: 112 TILTDKFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRGGR 170
TIL DKFGQPKGFAYVEF+EVEAVQEA++LNESELHGRQ+KV+PKRTNVPGMKQ GR
Sbjct: 119 TILMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR 177
>AT5G65260.1 | chr5:26080501-26082984 REVERSE LENGTH=221
Length = 220
Score = 211 bits (537), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/188 (63%), Positives = 135/188 (71%), Gaps = 13/188 (6%)
Query: 1 MADEEHEVYGQEIPLDGE-DVDMGAPG-------DEAAKMQELDXXXXXXXXXXXXANAL 52
M +EEHEVYG EIP GE D DM A + ++ELD A AL
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60
Query: 53 REMQTKVAKEMQGLDPN--ASSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNR 110
REMQ KV KEM DP A++ KEE+DARSV+VGNVDYACTPEEVQQHF +CGTV+R
Sbjct: 61 REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 120
Query: 111 VTILTDKFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRGGR 170
VTILTDKFGQPKGFAYVEF+EVEAVQEA++LNESELHGRQ+KV KRTNVPG+KQ RG R
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRR 180
Query: 171 GFGGHPYM 178
+PYM
Sbjct: 181 ---FNPYM 185
>AT5G51120.2 | chr5:20779760-20781241 FORWARD LENGTH=266
Length = 265
Score = 176 bits (447), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/102 (82%), Positives = 93/102 (91%), Gaps = 1/102 (0%)
Query: 72 SSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLE 131
S+ KEE+D+RS+YVGNVDYACTPEEVQQHF SCGTVNRVTILTDKFGQPKGFAYVEF+E
Sbjct: 131 SAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE 190
Query: 132 VEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPRG-GRGF 172
VEAVQ ++ LNESELHGRQIKV+ KRTNVPGM+Q RG GR F
Sbjct: 191 VEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRPF 232
>AT3G12640.1 | chr3:4014455-4017675 FORWARD LENGTH=639
Length = 638
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 71 SSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTD-KFGQPKGFAYVEF 129
S++ E+ +R+++V NV + T + + +HFN G V + I+TD GQP G AY+EF
Sbjct: 469 STTRPLEDASSRTIFVANVHFGATKDSLSRHFNKFGEVLKAFIVTDPATGQPSGSAYIEF 528
Query: 130 LEVEAVQEAVKLNESELHGRQIKVAPKRTN------VPGMKQPRGGRGFGGHPYMR 179
EA + A+ L+ + R +K+ K +N M RGGR Y R
Sbjct: 529 TRKEAAENALSLDGTSFMSRILKIV-KGSNGQNQEAASSMSWSRGGRFTRAPSYFR 583
>AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610
Length = 609
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 83 SVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAVKLN 142
++YV NV+ A T EE+++HF+ CGT+ ++ D+ G+ KGF +V F E +AVK
Sbjct: 305 NIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTF 364
Query: 143 ESEL-HGRQIKVA 154
++ HG+ + VA
Sbjct: 365 HGQMFHGKPLYVA 377
>AT2G24350.1 | chr2:10361239-10364223 FORWARD LENGTH=538
Length = 537
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 22/130 (16%)
Query: 31 KMQELDXXXXXXXXXXXXANALREMQTKVAKE--MQGLDPNASSSESKEEMD---ARSVY 85
KMQEL+ LR +Q+K K+ ++ P+ S ES+ + D +R ++
Sbjct: 403 KMQELE---------------LRIIQSKQLKKQKVEERKPSPQSGESQYQEDVSESRVIH 447
Query: 86 VGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQ-PKGFAYVEFLEVEAVQEAVKLNE 143
V NV YA E + F+S CG V V ++TD + PKG A+V F E+V +AV L+
Sbjct: 448 VTNVYYAAKKEAISMFFSSKCGAVQNVIVVTDPVTRHPKGTAFVTFATKESVGKAVALSG 507
Query: 144 SELHGRQIKV 153
+ + R IKV
Sbjct: 508 TMFYSRPIKV 517
>AT3G50670.1 | chr3:18826476-18829492 REVERSE LENGTH=428
Length = 427
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 58 KVAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDK 117
K A++++ DPN + + + ++++V ++Y + ++++ F S G + RV ++TD+
Sbjct: 116 KAAEDLKKYDPNNDPNATGDPY--KTLFVSRLNYESSESKIKREFESYGPIKRVHLVTDQ 173
Query: 118 F-GQPKGFAYVEFLEVEAVQEAVKLNESE-LHGRQIKVAPKR-TNVPGMKQPRGGRGFG 173
+PKG+A++E++ ++ A K + + + GR++ V +R VP + R G G G
Sbjct: 174 LTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLG 232
>AT2G16940.2 | chr2:7342869-7347052 REVERSE LENGTH=611
Length = 610
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 81 ARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAVK 140
AR +YVGN+ + +++++ F S G+V V + D+ G KGF +V+F +E + A+
Sbjct: 333 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 392
Query: 141 LN-ESELHGRQIKVA--PKRTNVP 161
LN + E+ GR IKV+ +T VP
Sbjct: 393 LNGQLEIAGRAIKVSAVTDQTEVP 416
>AT3G52380.1 | chr3:19421619-19422855 FORWARD LENGTH=330
Length = 329
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 84 VYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFG-QPKGFAYVEFLEVEAVQEAVKL- 141
+YVGN+ Y T E+ Q F GTV V I+ DK + +GF +V +E +EA+++
Sbjct: 118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 177
Query: 142 NESELHGRQIKVAPKRTNVPGMKQPRGG 169
N S++ GR +KV N P + PRGG
Sbjct: 178 NSSQIGGRTVKV-----NFP--EVPRGG 198
>AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309
Length = 308
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 59 VAKEMQGLDPNASSSESKEEMD----ARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTIL 114
VA++ D S E EE R ++V N+ ++ + ++ + F CGTVN V I+
Sbjct: 68 VAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEII 127
Query: 115 TDKFGQPKGFAYVEFLEVEAVQEAV-KLNESELHGRQIKVA-PKRTNVPGMKQP 166
K G+ +GFA+V E Q A+ K + ++ GR I V+ +R P K P
Sbjct: 128 RQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSP 181
>AT3G55460.1 | chr3:20561024-20563502 FORWARD LENGTH=263
Length = 262
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 86 VGNVDYACTPEEVQQHFNSCGTVNRVTILTDKF-GQPKGFAYVEFLEVEAVQEAVK-LNE 143
V N+ C PEE+++ F G V V I D + GQP+GFA+VEF++ EA + +N
Sbjct: 51 VRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNR 110
Query: 144 SELHGRQIKV 153
GR+I V
Sbjct: 111 RSFAGREITV 120
>AT4G10610.1 | chr4:6557336-6559143 FORWARD LENGTH=337
Length = 336
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 73 SESKEEMDARSVYVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFLE 131
+E + EM AR++Y N+D T +++ F S CG V R+ +L D + P +VEF+
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGD-YHHPTRIGFVEFVM 296
Query: 132 VEAVQEAVKLNESELHGRQIKVAPKRTNVPGMKQPR 167
E+ A+ + L I+V+P +T V PR
Sbjct: 297 AESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPR 332
>AT1G74230.1 | chr1:27915346-27916857 FORWARD LENGTH=290
Length = 289
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 70 ASSS--ESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDK-FGQPKGFAY 126
ASSS +S M + ++VG + Y+ +++ F+ G V I+ D+ G+ +GFA+
Sbjct: 20 ASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAF 79
Query: 127 VEFLEVEAVQEAVKLNESELHGRQIKV 153
V F E A++L+ +LHGR+I+V
Sbjct: 80 VTFTSTEEASNAMQLDGQDLHGRRIRV 106
>AT1G53650.1 | chr1:20029262-20031243 REVERSE LENGTH=315
Length = 314
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 73 SESKEEMDARSVYVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFLE 131
SE + EM +R++Y NVD T ++V F S CG V R+ +L D+ + A+VEF
Sbjct: 216 SEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTR-IAFVEFAM 274
Query: 132 VEAVQEAVKLNESELHGRQIKVAPKRTNV 160
E+ A+ + L + I+V+P +T V
Sbjct: 275 AESAVAALNCSGIVLGSQPIRVSPSKTPV 303
>AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663
Length = 662
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 83 SVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAVQEAV-KL 141
+++V N+D + + + + F+ CGT+ + TD GQ +G+ +V+F ++ + A+ KL
Sbjct: 135 NLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKL 194
Query: 142 NESELHGRQIKVAP 155
N L+ +QI V P
Sbjct: 195 NGKVLNDKQIFVGP 208
>AT5G06210.1 | chr5:1878497-1879515 FORWARD LENGTH=147
Length = 146
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 51 ALREMQTKVAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNR 110
AL + + K + ++ +AS ++ A +++G + + T + + + F+ CG V
Sbjct: 3 ALARIGGRHLKSVCLINSSASCFFTQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVE 62
Query: 111 VTILTDKFG-QPKGFAYVEFLEVEAVQEAV-KLNESELHGRQIKVAPKRTNVPGMKQPRG 168
I+ D+ + KGF +V F + Q+A+ + N +L+GR I V + KQ G
Sbjct: 63 AQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFV-----DYAKAKQSLG 117
Query: 169 GRGFGGHPYMR 179
G GG+P R
Sbjct: 118 GG--GGYPIAR 126
>AT4G19610.1 | chr4:10677482-10681623 FORWARD LENGTH=817
Length = 816
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 71 SSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDK-FGQPKGFAYVEF 129
S + S + +D ++V N+ Y T EE+ +HF++ G ++ V ++ DK + +G AY+ +
Sbjct: 283 SKAVSDDVLDTGRLFVRNLPYTATEEELMEHFSTFGKISEVHLVLDKETKRSRGIAYILY 342
Query: 130 LEVEAVQEAV-KLNESELHGRQIKVAPKRTNVPGMKQ 165
L E A+ +L+ S GR + + P + KQ
Sbjct: 343 LIPECAARAMEELDNSSFQGRLLHILPAKHRETSDKQ 379
>AT3G14450.1 | chr3:4849788-4851601 FORWARD LENGTH=328
Length = 327
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 73 SESKEEMDARSVYVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFLE 131
SE + EM R++Y N+D + +V+ F S CG V R+ +L D+ + A+VEF
Sbjct: 229 SEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTR-IAFVEFAL 287
Query: 132 VEAVQEAVKLNESELHGRQIKVAPKRTNV-PGMKQP 166
++ A+ + + + I+V+P +T V P + +P
Sbjct: 288 ADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITRP 323
>AT1G01080.2 | chr1:45503-46789 REVERSE LENGTH=295
Length = 294
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 53 REMQTKVAKEMQ---GLDPNASSSESKEEMDARS---VYVGNVDYACTPEEVQQHFNSCG 106
REM+ + + +M +P +S K+ + S VYVGN+ + P+ ++ HF+ G
Sbjct: 178 REMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFG 237
Query: 107 TVNRVTILTD-KFGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKV 153
T+ +L D K G+ + FA++ F E A+ N ++ GR+I V
Sbjct: 238 TIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIV 285
>AT3G18610.1 | chr3:6404270-6407822 REVERSE LENGTH=637
Length = 636
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 53 REMQTKVAKEMQGLDPNASSSESKEEMDARSVYVGNVDYACTPEEVQQ----HFNSCGTV 108
R+++ +A E +G N++ E +R++YV + +E+++ HF+ CG V
Sbjct: 451 RDVRLDLANE-RGTPRNSNPGRKGEGSQSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEV 509
Query: 109 NRVTILTDK-FGQPKGFAYVEFLEVEAVQEAVKLNESELHGRQIKV 153
RV + TD+ G +GFAY++ EA++L+ SE+ G I V
Sbjct: 510 TRVHVPTDRETGASRGFAYIDL--TSGFDEALQLSGSEIGGGNIHV 553
>AT1G71800.1 | chr1:26999606-27001850 FORWARD LENGTH=462
Length = 461
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 70 ASSSESKEEMDARSVYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDK-FGQPKGFAYVE 128
ASSS + R V+VGN+ Y T E++++ G V ++TD+ G+PKG+ + E
Sbjct: 2 ASSSSQR-----RCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCE 56
Query: 129 FLEVEAVQEAVK-LNESELHGRQIKV 153
+ + E A + L E++GRQ++V
Sbjct: 57 YKDEETALSARRNLQSYEINGRQLRV 82
>AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246
Length = 245
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 84 VYVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYVEFLEV-EAVQEAVKLN 142
+Y+ N+DY E++++ F G + R T+ D+ G+ KG A V + +A+ K N
Sbjct: 90 LYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYN 149
Query: 143 ESELHGRQIKVAPKRTNVPGMKQPRG 168
+ +L G+ +K+ TN+ P G
Sbjct: 150 DVQLDGKPMKIEIVGTNLQTAAAPSG 175
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,675,303
Number of extensions: 126138
Number of successful extensions: 486
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 527
Number of HSP's successfully gapped: 30
Length of query: 204
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 110
Effective length of database: 8,529,465
Effective search space: 938241150
Effective search space used: 938241150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 109 (46.6 bits)