BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0216300 Os06g0216300|AB040743
(380 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375 494 e-140
AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398 481 e-136
AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325 432 e-121
AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392 395 e-110
AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270 336 1e-92
AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270 336 1e-92
>AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375
Length = 374
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 281/361 (77%), Gaps = 6/361 (1%)
Query: 14 IPLLTPYKMGQLELSHRVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISP 73
+PLLTPYKMG+ LSHRVVLAPLTR +SYG+VPQPHA +YYSQR + GG LIAEAT +S
Sbjct: 12 VPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSD 71
Query: 74 TAQGYPETPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISST 133
TAQGYP+TPGI+T++ +EAWKPIVDAVH KG +FF QIWHVGRVS FQP QAPIS T
Sbjct: 72 TAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQPRRQAPISCT 131
Query: 134 DKQITPD--DSGM---VYSKPRRLRTDEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYL 188
K I P +G+ ++ PRRL +EIP I++DFR AARNA+EAGFDGVEIHGAHGYL
Sbjct: 132 GKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYL 191
Query: 189 LEQFMKDSANDRTDEYGGSLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFVDFMDCFDSD 248
++QFMKD NDRTDEYGGSL+NRC+F RVGIRLSPF D+M+ D++
Sbjct: 192 IDQFMKDKVNDRTDEYGGSLQNRCKFALEVVDAVAKEIGPDRVGIRLSPFADYMESGDTN 251
Query: 249 PVALGSYMVQQLNKHPGFLYCHMVEPRMAIIEGRRKIAHGLLPFRKQFNGTFIAAGGYDR 308
P ALG YMV+ LNK+ G LYCHM+EPRM + +H L+P R+ F GTFI+AGG+ R
Sbjct: 252 PEALGLYMVESLNKY-GILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTR 310
Query: 309 EEGNKVVADGYADLVAYGRLFLANPDLPRRFELDAPLNRYDRSTFYTQDPVVGYTDYPFL 368
E+GN+ VA G DLVAYGR FLANPDLP+RF+LDAPLN+Y+RSTFYT DPVVGYTDYP L
Sbjct: 311 EDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSL 370
Query: 369 E 369
E
Sbjct: 371 E 371
>AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398
Length = 397
Score = 481 bits (1238), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/387 (60%), Positives = 283/387 (73%), Gaps = 31/387 (8%)
Query: 14 IPLLTPYKMGQLELSHRVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISP 73
+PLLTPYKMG+ LSHRVVLAPLTR RSYGNVPQPHAA+YYSQR T GG LI EAT +S
Sbjct: 10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSD 69
Query: 74 TAQGYPETPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISST 133
TAQGY +TPGI+T++ +EAWKPIVDAVH KG +FF QIWHVGRVS + FQPNG+APIS +
Sbjct: 70 TAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCS 129
Query: 134 DKQITPD--DSGM---VYSKPRRLRTDEIPQIIDDFRRAARNAIE--------------- 173
DK + P +G+ +++ PRRL +EIP I++DFR AARNA+E
Sbjct: 130 DKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGKHILDLEFKKLKP 189
Query: 174 ----------AGFDGVEIHGAHGYLLEQFMKDSANDRTDEYGGSLENRCRFXXXXXXXXX 223
AGFDGVEIHGA+GYL++QFMKD+ NDRTDEYGGSL+NRC+F
Sbjct: 190 FKILICVLVVAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIVDAVA 249
Query: 224 XXXXXHRVGIRLSPFVDFMDCFDSDPVALGSYMVQQLNKHPGFLYCHMVEPRMAIIEGRR 283
RVGIRLSPF D+M+ D++P ALG YM + LNK+ G LYCH++E RM +
Sbjct: 250 KEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKY-GILYCHVIEARMKTMGEVH 308
Query: 284 KIAHGLLPFRKQFNGTFIAAGGYDREEGNKVVADGYADLVAYGRLFLANPDLPRRFELDA 343
H L+P RK F GTFI+AGG+ RE+GN+ V+ G DLVAYGR FLANPDLP+RF++DA
Sbjct: 309 ACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDA 368
Query: 344 PLNRYDRSTFYTQDPVVGYTDYPFLEE 370
PLN+YDR TFYT DPVVGYTDYPFLE
Sbjct: 369 PLNKYDRPTFYTSDPVVGYTDYPFLES 395
>AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325
Length = 324
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/326 (63%), Positives = 240/326 (73%), Gaps = 2/326 (0%)
Query: 22 MGQLELSHRVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISPTAQGYPET 81
M L+HR+V+AP+ R RSYGN+PQPH A+YY QR T GGLLI+EAT +S TA Y
Sbjct: 1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNM 60
Query: 82 PGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISSTDKQITPDD 141
PGI+ ++QIEAWKPIVDAVH G +FF Q+WH GRVS D QPNG++P+SSTDK DD
Sbjct: 61 PGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFA-DD 119
Query: 142 SGMVYSKPRRLRTDEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQFMKDSANDRT 201
++ PRRLRTDEIP II+DFR AARNA EAGFDGVEIHGAHGYL++QFMKDS NDRT
Sbjct: 120 PSNEFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDRT 179
Query: 202 DEYGGSLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFVDFMDCFDSDPVALGSYMVQQLN 261
D YGGSLENRCRF RVGIRLSPF D+M+ D+DP LG YM + LN
Sbjct: 180 DSYGGSLENRCRFALQVIEAVSKEIGPDRVGIRLSPFADYMESGDTDPKRLGLYMAKSLN 239
Query: 262 KHPGFLYCHMVEPRMAIIEGRRKIAHGLLPFRKQFNGTFIAAGGYDREEGNKVVADGYAD 321
+ LYCHM+EPRM + + L P R FNGTFI AGGY RE+GNK VA+G D
Sbjct: 240 RFE-ILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTD 298
Query: 322 LVAYGRLFLANPDLPRRFELDAPLNR 347
LVAYGRLFLANPDLP+RFEL+APLN+
Sbjct: 299 LVAYGRLFLANPDLPKRFELNAPLNK 324
>AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392
Length = 391
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 192/374 (51%), Positives = 252/374 (67%), Gaps = 21/374 (5%)
Query: 16 LLTPYKMGQLELSHRVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISPTA 75
L + YKMG+ +LSHRVVLAP+TRCR+ VP A YY+QR T GG LI+E T +SP +
Sbjct: 12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGS 71
Query: 76 QGYPETPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISSTDK 135
G+P PGIY+ +Q+EAWK +V+AVH KG F Q+WHVGR S +QPNG +PISST+K
Sbjct: 72 AGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNK 131
Query: 136 QIT--------PDDSGMVYSKPRRLRTDEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGY 187
I+ PD S + Y KPR L EIP++++D+ +A NAI AGFDG+EIHGAHGY
Sbjct: 132 PISENRWRVLLPDGSHVKYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGY 191
Query: 188 LLEQFMKDSANDRTDEYGGSLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFVDFMDCFDS 247
L++QF+KD NDRTD+YGGS+ NRCRF +VG+R+SP +D +D DS
Sbjct: 192 LIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDS 251
Query: 248 DPVALGSYMVQQLNKHPG-----FLYCHMVEPRMAII----EGRR----KIAHGLLPFRK 294
DP++LG +V LNK G Y H+ +PR GR+ + A + R
Sbjct: 252 DPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRM 311
Query: 295 QFNGTFIAAGGYDREEGNKVVADGYADLVAYGRLFLANPDLPRRFELDAPLNRYDRSTFY 354
+NGTF+++GG+++E G + V G ADLV+YGRLF+ANPDL RF++D LN+Y+R TFY
Sbjct: 312 AYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFY 371
Query: 355 TQDPVVGYTDYPFL 368
TQDPVVGYTDYPFL
Sbjct: 372 TQDPVVGYTDYPFL 385
>AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270
Length = 269
Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 193/251 (76%), Gaps = 2/251 (0%)
Query: 14 IPLLTPYKMGQLELSHRVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISP 73
IPLL PYKMG LSHRVVLAPLTR RSYGN+PQP+A +YY+QR T GGLLI+E+ +S
Sbjct: 7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSE 66
Query: 74 TAQGYPETPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISST 133
T+ GYP+ PG++ + Q+EAWKPIVDAVH KG +FF QIWH GRV D QPNG+AP+SST
Sbjct: 67 TSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPVSST 125
Query: 134 DKQITPDDS-GMVYSKPRRLRTDEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQF 192
DK + + G + PRRLR+DE+P I++DFR AARNAIEAGFDGVE+HGAHGYL++QF
Sbjct: 126 DKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQF 185
Query: 193 MKDSANDRTDEYGGSLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFVDFMDCFDSDPVAL 252
+KD NDR+D+YGGSLENRCRF RVGIRLSPF D+M+ DS+P AL
Sbjct: 186 LKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNPEAL 245
Query: 253 GSYMVQQLNKH 263
G Y+VQ +NKH
Sbjct: 246 GLYLVQAMNKH 256
>AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270
Length = 269
Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 193/251 (76%), Gaps = 2/251 (0%)
Query: 14 IPLLTPYKMGQLELSHRVVLAPLTRCRSYGNVPQPHAAVYYSQRATRGGLLIAEATDISP 73
IPLL PYKMG LSHRVVLAPLTR RSYGN+PQP+A +YY+QR T GGLLI+E+ +S
Sbjct: 7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSE 66
Query: 74 TAQGYPETPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISST 133
T+ GYP+ PG++ + Q+EAWKPIVDAVH KG +FF QIWH GRV D QPNG+AP+SST
Sbjct: 67 TSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPVSST 125
Query: 134 DKQITPDDS-GMVYSKPRRLRTDEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQF 192
DK + + G + PRRLR+DE+P I++DFR AARNAIEAGFDGVE+HGAHGYL++QF
Sbjct: 126 DKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQF 185
Query: 193 MKDSANDRTDEYGGSLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFVDFMDCFDSDPVAL 252
+KD NDR+D+YGGSLENRCRF RVGIRLSPF D+M+ DS+P AL
Sbjct: 186 LKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNPEAL 245
Query: 253 GSYMVQQLNKH 263
G Y+VQ +NKH
Sbjct: 246 GLYLVQAMNKH 256
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.140 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,227,326
Number of extensions: 345097
Number of successful extensions: 594
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 582
Number of HSP's successfully gapped: 6
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)