BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0216200 Os06g0216200|Os06g0216200
(376 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375 503 e-143
AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398 483 e-136
AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325 424 e-119
AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392 387 e-108
AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270 342 2e-94
AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270 342 2e-94
>AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375
Length = 374
Score = 503 bits (1294), Expect = e-143, Method: Compositional matrix adjust.
Identities = 243/370 (65%), Positives = 284/370 (76%), Gaps = 6/370 (1%)
Query: 1 MVHAPAKEAIPLLTPYKMGQLELSHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLL 60
MV+A AK+++PLLTPYKMG+ LSHRVVLAPLTR +SYG VPQPHA +YYSQR + GG L
Sbjct: 3 MVNAEAKQSVPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFL 62
Query: 61 IAEATVISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQP 120
IAEAT +S TAQGYPDTPGI+T++ +EAWKPIVDAVH KG +FF QIWHVGRVS FQP
Sbjct: 63 IAEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQP 122
Query: 121 NGQAPISSTDKQITPDDSG-----MVYSKPRRLRTDEIPQIVDDFRRAARNAIESGFDGV 175
QAPIS T K I P ++ PRRL +EIP IV+DFR AARNA+E+GFDGV
Sbjct: 123 RRQAPISCTGKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGV 182
Query: 176 EIHGAHGYLLDQFMKDSANDRTDEYGGNLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFD 235
EIHGAHGYL+DQFMKD NDRTDEYGG+L+NRC+F RVGIRLSPF
Sbjct: 183 EIHGAHGYLIDQFMKDKVNDRTDEYGGSLQNRCKFALEVVDAVAKEIGPDRVGIRLSPFA 242
Query: 236 NYMDCFDSNPVALGSYMVQQLNKHPGFLYCHMVEPGMAIVEGRRKITHGLLPFRKQFNGT 295
+YM+ D+NP ALG YMV+ LNK+ G LYCHM+EP M V +H L+P R+ F GT
Sbjct: 243 DYMESGDTNPEALGLYMVESLNKY-GILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGT 301
Query: 296 FIAAGGYDREEGNKVVADGYADLVAYGRLFLANPDLPRRFELDAPLNRYDRSTFYTQDPV 355
FI+AGG+ RE+GN+ VA G DLVAYGR FLANPDLP+RF+LDAPLN+Y+RSTFYT DPV
Sbjct: 302 FISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPV 361
Query: 356 VGYTDYPFLE 365
VGYTDYP LE
Sbjct: 362 VGYTDYPSLE 371
>AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398
Length = 397
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/395 (60%), Positives = 288/395 (72%), Gaps = 31/395 (7%)
Query: 1 MVHAPAKEAIPLLTPYKMGQLELSHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLL 60
M + AK+++PLLTPYKMG+ LSHRVVLAPLTR RSYG+VPQPHAA+YYSQR T GG L
Sbjct: 1 MENGEAKQSVPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFL 60
Query: 61 IAEATVISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQP 120
I EAT +S TAQGY DTPGI+T++ +EAWKPIVDAVH KG +FF QIWHVGRVS + FQP
Sbjct: 61 ITEATGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQP 120
Query: 121 NGQAPISSTDKQITPD--DSGM---VYSKPRRLRTDEIPQIVDDFRRAARNAIE------ 169
NG+APIS +DK + P +G+ +++ PRRL +EIP IV+DFR AARNA+E
Sbjct: 121 NGKAPISCSDKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGKHIL 180
Query: 170 -------------------SGFDGVEIHGAHGYLLDQFMKDSANDRTDEYGGNLENRCRF 210
+GFDGVEIHGA+GYL+DQFMKD+ NDRTDEYGG+L+NRC+F
Sbjct: 181 DLEFKKLKPFKILICVLVVAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKF 240
Query: 211 XXXXXXXXXXXXXXHRVGIRLSPFDNYMDCFDSNPVALGSYMVQQLNKHPGFLYCHMVEP 270
RVGIRLSPF +YM+ D+NP ALG YM + LNK+ G LYCH++E
Sbjct: 241 PLEIVDAVAKEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKY-GILYCHVIEA 299
Query: 271 GMAIVEGRRKITHGLLPFRKQFNGTFIAAGGYDREEGNKVVADGYADLVAYGRLFLANPD 330
M + H L+P RK F GTFI+AGG+ RE+GN+ V+ G DLVAYGR FLANPD
Sbjct: 300 RMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPD 359
Query: 331 LPRRFELDAPLNRYDRSTFYTQDPVVGYTDYPFLE 365
LP+RF++DAPLN+YDR TFYT DPVVGYTDYPFLE
Sbjct: 360 LPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFLE 394
>AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325
Length = 324
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/326 (61%), Positives = 240/326 (73%), Gaps = 2/326 (0%)
Query: 18 MGQLELSHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLLIAEATVISPTAQGYPDT 77
M L+HR+V+AP+ R RSYG++PQPH A+YY QR T GGLLI+EAT +S TA Y +
Sbjct: 1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNM 60
Query: 78 PGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPISSTDKQITPDD 137
PGI+ ++QIEAWKPIVDAVH G +FF Q+WH GRVS D QPNG++P+SSTDK DD
Sbjct: 61 PGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFA-DD 119
Query: 138 SGMVYSKPRRLRTDEIPQIVDDFRRAARNAIESGFDGVEIHGAHGYLLDQFMKDSANDRT 197
++ PRRLRTDEIP I++DFR AARNA E+GFDGVEIHGAHGYL+DQFMKDS NDRT
Sbjct: 120 PSNEFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDRT 179
Query: 198 DEYGGNLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFDNYMDCFDSNPVALGSYMVQQLN 257
D YGG+LENRCRF RVGIRLSPF +YM+ D++P LG YM + LN
Sbjct: 180 DSYGGSLENRCRFALQVIEAVSKEIGPDRVGIRLSPFADYMESGDTDPKRLGLYMAKSLN 239
Query: 258 KHPGFLYCHMVEPGMAIVEGRRKITHGLLPFRKQFNGTFIAAGGYDREEGNKVVADGYAD 317
+ LYCHM+EP M V + L P R FNGTFI AGGY RE+GNK VA+G D
Sbjct: 240 RFE-ILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTD 298
Query: 318 LVAYGRLFLANPDLPRRFELDAPLNR 343
LVAYGRLFLANPDLP+RFEL+APLN+
Sbjct: 299 LVAYGRLFLANPDLPKRFELNAPLNK 324
>AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392
Length = 391
Score = 387 bits (993), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/385 (49%), Positives = 253/385 (65%), Gaps = 21/385 (5%)
Query: 1 MVHAPAKEAIPLLTPYKMGQLELSHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLL 60
M A L + YKMG+ +LSHRVVLAP+TRCR+ VP A YY+QR T GG L
Sbjct: 1 MTAAQGNSNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFL 60
Query: 61 IAEATVISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQP 120
I+E T++SP + G+P PGIY+ +Q+EAWK +V+AVH KG F Q+WHVGR S +QP
Sbjct: 61 ISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQP 120
Query: 121 NGQAPISSTDKQIT--------PDDSGMVYSKPRRLRTDEIPQIVDDFRRAARNAIESGF 172
NG +PISST+K I+ PD S + Y KPR L EIP++V+D+ +A NAI +GF
Sbjct: 121 NGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEASEIPRVVEDYCLSALNAIRAGF 180
Query: 173 DGVEIHGAHGYLLDQFMKDSANDRTDEYGGNLENRCRFXXXXXXXXXXXXXXHRVGIRLS 232
DG+EIHGAHGYL+DQF+KD NDRTD+YGG++ NRCRF +VG+R+S
Sbjct: 181 DGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVS 240
Query: 233 PFDNYMDCFDSNPVALGSYMVQQLNKHPG-----FLYCHMVEP---GMAIVEGRRKITHG 284
P +++D DS+P++LG +V LNK G Y H+ +P E R+ +
Sbjct: 241 PAIDHLDATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDE 300
Query: 285 -----LLPFRKQFNGTFIAAGGYDREEGNKVVADGYADLVAYGRLFLANPDLPRRFELDA 339
+ R +NGTF+++GG+++E G + V G ADLV+YGRLF+ANPDL RF++D
Sbjct: 301 EEAKLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDG 360
Query: 340 PLNRYDRSTFYTQDPVVGYTDYPFL 364
LN+Y+R TFYTQDPVVGYTDYPFL
Sbjct: 361 ELNKYNRKTFYTQDPVVGYTDYPFL 385
>AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270
Length = 269
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 197/254 (77%), Gaps = 2/254 (0%)
Query: 7 KEAIPLLTPYKMGQLELSHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLLIAEATV 66
K++IPLL PYKMG LSHRVVLAPLTR RSYG++PQP+A +YY+QR T GGLLI+E+ V
Sbjct: 4 KQSIPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCV 63
Query: 67 ISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPI 126
+S T+ GYPD PG++ + Q+EAWKPIVDAVH KG +FF QIWH GRV D QPNG+AP+
Sbjct: 64 VSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPV 122
Query: 127 SSTDKQITPDDS-GMVYSKPRRLRTDEIPQIVDDFRRAARNAIESGFDGVEIHGAHGYLL 185
SSTDK + + G + PRRLR+DE+P IV+DFR AARNAIE+GFDGVE+HGAHGYL+
Sbjct: 123 SSTDKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLI 182
Query: 186 DQFMKDSANDRTDEYGGNLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFDNYMDCFDSNP 245
DQF+KD NDR+D+YGG+LENRCRF RVGIRLSPF +YM+ DSNP
Sbjct: 183 DQFLKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNP 242
Query: 246 VALGSYMVQQLNKH 259
ALG Y+VQ +NKH
Sbjct: 243 EALGLYLVQAMNKH 256
>AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270
Length = 269
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 197/254 (77%), Gaps = 2/254 (0%)
Query: 7 KEAIPLLTPYKMGQLELSHRVVLAPLTRCRSYGHVPQPHAAVYYSQRATNGGLLIAEATV 66
K++IPLL PYKMG LSHRVVLAPLTR RSYG++PQP+A +YY+QR T GGLLI+E+ V
Sbjct: 4 KQSIPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCV 63
Query: 67 ISPTAQGYPDTPGIYTQQQIEAWKPIVDAVHRKGALFFLQIWHVGRVSTTDFQPNGQAPI 126
+S T+ GYPD PG++ + Q+EAWKPIVDAVH KG +FF QIWH GRV D QPNG+AP+
Sbjct: 64 VSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPV 122
Query: 127 SSTDKQITPDDS-GMVYSKPRRLRTDEIPQIVDDFRRAARNAIESGFDGVEIHGAHGYLL 185
SSTDK + + G + PRRLR+DE+P IV+DFR AARNAIE+GFDGVE+HGAHGYL+
Sbjct: 123 SSTDKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLI 182
Query: 186 DQFMKDSANDRTDEYGGNLENRCRFXXXXXXXXXXXXXXHRVGIRLSPFDNYMDCFDSNP 245
DQF+KD NDR+D+YGG+LENRCRF RVGIRLSPF +YM+ DSNP
Sbjct: 183 DQFLKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNP 242
Query: 246 VALGSYMVQQLNKH 259
ALG Y+VQ +NKH
Sbjct: 243 EALGLYLVQAMNKH 256
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,526,873
Number of extensions: 362192
Number of successful extensions: 638
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 626
Number of HSP's successfully gapped: 6
Length of query: 376
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 276
Effective length of database: 8,364,969
Effective search space: 2308731444
Effective search space used: 2308731444
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)