BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0215900 Os06g0215900|AK072596
(374 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375 491 e-139
AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398 472 e-133
AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325 422 e-118
AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392 381 e-106
AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270 331 4e-91
AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270 331 4e-91
>AT1G76690.1 | chr1:28778976-28780355 FORWARD LENGTH=375
Length = 374
Score = 491 bits (1263), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/361 (65%), Positives = 277/361 (76%), Gaps = 12/361 (3%)
Query: 15 IPLLTPYKMGRFELSHRVVLAPLTRNRSYGNV------LYYTQRATSGGLLVTEATGVSD 68
+PLLTPYKMGRF LSHRVVLAPLTR +SYG+V LYY+QR + GG L+ EATGVSD
Sbjct: 12 VPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSD 71
Query: 69 TAQGYPDTPGIWTQQQVEAWKPIVDAVHRKGALFICQLWHVGRVSTNEYQPDGQAPISST 128
TAQGYPDTPGIWT++ VEAWKPIVDAVH KG +F CQ+WHVGRVS +QP QAPIS T
Sbjct: 72 TAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQPRRQAPISCT 131
Query: 129 DRQITPD--DSGI---VYSKPRRLRTEEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYL 183
+ I P +GI ++ PRRL EEIP I++DFR AARNA+EAGFDGVEIHGAHGYL
Sbjct: 132 GKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYL 191
Query: 184 LEQFMKDSANDRSDEYGGSLENRCRFXXXXXXXXXXXXGAHRVGIRLSPFIDYMDCVDSD 243
++QFMKD NDR+DEYGGSL+NRC+F G RVGIRLSPF DYM+ D++
Sbjct: 192 IDQFMKDKVNDRTDEYGGSLQNRCKFALEVVDAVAKEIGPDRVGIRLSPFADYMESGDTN 251
Query: 244 PVALGSYMVQQLNKHPGFLYCHMVEPRMAIVEGRRKITHGLLPFRKLFNGTFIAAGGYDR 303
P ALG YMV+ LNK+ G LYCHM+EPRM V +H L+P R+ F GTFI+AGG+ R
Sbjct: 252 PEALGLYMVESLNKY-GILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTR 310
Query: 304 EEGNKVIADGYADLVAYGRHFLANPDLPKRFAINAPLNKYNRSTFYIQDPVVGYTDYPFL 363
E+GN+ +A G DLVAYGR FLANPDLPKRF ++APLNKYNRSTFY DPVVGYTDYP L
Sbjct: 311 EDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYPSL 370
Query: 364 D 364
+
Sbjct: 371 E 371
>AT1G76680.2 | chr1:28776982-28778271 FORWARD LENGTH=398
Length = 397
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/386 (60%), Positives = 280/386 (72%), Gaps = 37/386 (9%)
Query: 15 IPLLTPYKMGRFELSHRVVLAPLTRNRSYGNV------LYYTQRATSGGLLVTEATGVSD 68
+PLLTPYKMGRF LSHRVVLAPLTR RSYGNV +YY+QR T GG L+TEATGVSD
Sbjct: 10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSD 69
Query: 69 TAQGYPDTPGIWTQQQVEAWKPIVDAVHRKGALFICQLWHVGRVSTNEYQPDGQAPISST 128
TAQGY DTPGIWT++ VEAWKPIVDAVH KG +F CQ+WHVGRVS + +QP+G+APIS +
Sbjct: 70 TAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCS 129
Query: 129 DRQITPD--DSGI---VYSKPRRLRTEEIPQIIDDFRRAARNAIEAG------------- 170
D+ + P +GI +++ PRRL EEIP I++DFR AARNA+EAG
Sbjct: 130 DKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGKHILDLEFKKLKP 189
Query: 171 ------------FDGVEIHGAHGYLLEQFMKDSANDRSDEYGGSLENRCRFXXXXXXXXX 218
FDGVEIHGA+GYL++QFMKD+ NDR+DEYGGSL+NRC+F
Sbjct: 190 FKILICVLVVAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIVDAVA 249
Query: 219 XXXGAHRVGIRLSPFIDYMDCVDSDPVALGSYMVQQLNKHPGFLYCHMVEPRMAIVEGRR 278
G RVGIRLSPF DYM+ D++P ALG YM + LNK+ G LYCH++E RM +
Sbjct: 250 KEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKY-GILYCHVIEARMKTMGEVH 308
Query: 279 KITHGLLPFRKLFNGTFIAAGGYDREEGNKVIADGYADLVAYGRHFLANPDLPKRFAINA 338
H L+P RK F GTFI+AGG+ RE+GN+ ++ G DLVAYGR FLANPDLPKRF ++A
Sbjct: 309 ACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDA 368
Query: 339 PLNKYNRSTFYIQDPVVGYTDYPFLD 364
PLNKY+R TFY DPVVGYTDYPFL+
Sbjct: 369 PLNKYDRPTFYTSDPVVGYTDYPFLE 394
>AT1G09400.1 | chr1:3033676-3034993 REVERSE LENGTH=325
Length = 324
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/326 (61%), Positives = 238/326 (73%), Gaps = 8/326 (2%)
Query: 23 MGRFELSHRVVLAPLTRNRSYGNV------LYYTQRATSGGLLVTEATGVSDTAQGYPDT 76
M F L+HR+V+AP+ R RSYGN+ LYY QR T GGLL++EATGVS+TA Y +
Sbjct: 1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNM 60
Query: 77 PGIWTQQQVEAWKPIVDAVHRKGALFICQLWHVGRVSTNEYQPDGQAPISSTDRQITPDD 136
PGIW ++Q+EAWKPIVDAVH G +F CQLWH GRVS + QP+G++P+SSTD+ DD
Sbjct: 61 PGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFA-DD 119
Query: 137 SGIVYSKPRRLRTEEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQFMKDSANDRS 196
++ PRRLRT+EIP II+DFR AARNA EAGFDGVEIHGAHGYL++QFMKDS NDR+
Sbjct: 120 PSNEFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDRT 179
Query: 197 DEYGGSLENRCRFXXXXXXXXXXXXGAHRVGIRLSPFIDYMDCVDSDPVALGSYMVQQLN 256
D YGGSLENRCRF G RVGIRLSPF DYM+ D+DP LG YM + LN
Sbjct: 180 DSYGGSLENRCRFALQVIEAVSKEIGPDRVGIRLSPFADYMESGDTDPKRLGLYMAKSLN 239
Query: 257 KHPGFLYCHMVEPRMAIVEGRRKITHGLLPFRKLFNGTFIAAGGYDREEGNKVIADGYAD 316
+ LYCHM+EPRM V + L P R FNGTFI AGGY RE+GNK +A+G D
Sbjct: 240 RFE-ILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTD 298
Query: 317 LVAYGRHFLANPDLPKRFAINAPLNK 342
LVAYGR FLANPDLPKRF +NAPLNK
Sbjct: 299 LVAYGRLFLANPDLPKRFELNAPLNK 324
>AT2G06050.2 | chr2:2359240-2361971 REVERSE LENGTH=392
Length = 391
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/374 (50%), Positives = 244/374 (65%), Gaps = 27/374 (7%)
Query: 17 LLTPYKMGRFELSHRVVLAPLTRNRSYGNV------LYYTQRATSGGLLVTEATGVSDTA 70
L + YKMGRF+LSHRVVLAP+TR R+ V YY QR T GG L++E T VS +
Sbjct: 12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGS 71
Query: 71 QGYPDTPGIWTQQQVEAWKPIVDAVHRKGALFICQLWHVGRVSTNEYQPDGQAPISSTDR 130
G+P PGI++ +QVEAWK +V+AVH KG CQLWHVGR S YQP+G +PISST++
Sbjct: 72 AGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNK 131
Query: 131 QIT--------PDDSGIVYSKPRRLRTEEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGY 182
I+ PD S + Y KPR L EIP++++D+ +A NAI AGFDG+EIHGAHGY
Sbjct: 132 PISENRWRVLLPDGSHVKYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGY 191
Query: 183 LLEQFMKDSANDRSDEYGGSLENRCRFXXXXXXXXXXXXGAHRVGIRLSPFIDYMDCVDS 242
L++QF+KD NDR+D+YGGS+ NRCRF GA +VG+R+SP ID++D DS
Sbjct: 192 LIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDS 251
Query: 243 DPVALGSYMVQQLNKHPG-----FLYCHMVEPRMAIVEGRRKITHG--------LLPFRK 289
DP++LG +V LNK G Y H+ +PR G + R
Sbjct: 252 DPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRM 311
Query: 290 LFNGTFIAAGGYDREEGNKVIADGYADLVAYGRHFLANPDLPKRFAINAPLNKYNRSTFY 349
+NGTF+++GG+++E G + + G ADLV+YGR F+ANPDL RF I+ LNKYNR TFY
Sbjct: 312 AYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFY 371
Query: 350 IQDPVVGYTDYPFL 363
QDPVVGYTDYPFL
Sbjct: 372 TQDPVVGYTDYPFL 385
>AT1G18020.1 | chr1:6202272-6203572 FORWARD LENGTH=270
Length = 269
Score = 331 bits (849), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 194/251 (77%), Gaps = 8/251 (3%)
Query: 15 IPLLTPYKMGRFELSHRVVLAPLTRNRSYGNV------LYYTQRATSGGLLVTEATGVSD 68
IPLL PYKMG F LSHRVVLAPLTR+RSYGN+ LYYTQR T GGLL++E+ VS+
Sbjct: 7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSE 66
Query: 69 TAQGYPDTPGIWTQQQVEAWKPIVDAVHRKGALFICQLWHVGRVSTNEYQPDGQAPISST 128
T+ GYPD PG+W + QVEAWKPIVDAVH KG +F CQ+WH GRV ++ QP+G+AP+SST
Sbjct: 67 TSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRV-FHQDQPNGEAPVSST 125
Query: 129 DRQITPDDS-GIVYSKPRRLRTEEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQF 187
D+ + + G + PRRLR++E+P I++DFR AARNAIEAGFDGVE+HGAHGYL++QF
Sbjct: 126 DKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQF 185
Query: 188 MKDSANDRSDEYGGSLENRCRFXXXXXXXXXXXXGAHRVGIRLSPFIDYMDCVDSDPVAL 247
+KD NDRSD+YGGSLENRCRF G+ RVGIRLSPF DYM+ DS+P AL
Sbjct: 186 LKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNPEAL 245
Query: 248 GSYMVQQLNKH 258
G Y+VQ +NKH
Sbjct: 246 GLYLVQAMNKH 256
>AT1G17990.1 | chr1:6192455-6193755 REVERSE LENGTH=270
Length = 269
Score = 331 bits (849), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/251 (63%), Positives = 194/251 (77%), Gaps = 8/251 (3%)
Query: 15 IPLLTPYKMGRFELSHRVVLAPLTRNRSYGNV------LYYTQRATSGGLLVTEATGVSD 68
IPLL PYKMG F LSHRVVLAPLTR+RSYGN+ LYYTQR T GGLL++E+ VS+
Sbjct: 7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSE 66
Query: 69 TAQGYPDTPGIWTQQQVEAWKPIVDAVHRKGALFICQLWHVGRVSTNEYQPDGQAPISST 128
T+ GYPD PG+W + QVEAWKPIVDAVH KG +F CQ+WH GRV ++ QP+G+AP+SST
Sbjct: 67 TSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRV-FHQDQPNGEAPVSST 125
Query: 129 DRQITPDDS-GIVYSKPRRLRTEEIPQIIDDFRRAARNAIEAGFDGVEIHGAHGYLLEQF 187
D+ + + G + PRRLR++E+P I++DFR AARNAIEAGFDGVE+HGAHGYL++QF
Sbjct: 126 DKPLMCKNMYGGQFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQF 185
Query: 188 MKDSANDRSDEYGGSLENRCRFXXXXXXXXXXXXGAHRVGIRLSPFIDYMDCVDSDPVAL 247
+KD NDRSD+YGGSLENRCRF G+ RVGIRLSPF DYM+ DS+P AL
Sbjct: 186 LKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNPEAL 245
Query: 248 GSYMVQQLNKH 258
G Y+VQ +NKH
Sbjct: 246 GLYLVQAMNKH 256
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.139 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,124,044
Number of extensions: 341435
Number of successful extensions: 578
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 559
Number of HSP's successfully gapped: 6
Length of query: 374
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,364,969
Effective search space: 2292001506
Effective search space used: 2292001506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)