BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0215400 Os06g0215400|AK101083
         (679 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G36210.1  | chr5:14248202-14253272 REVERSE LENGTH=731          895   0.0  
AT4G14570.1  | chr4:8362586-8366525 FORWARD LENGTH=765             81   2e-15
AT5G24260.1  | chr5:8234865-8237810 REVERSE LENGTH=747             57   5e-08

>AT5G36210.1 | chr5:14248202-14253272 REVERSE LENGTH=731
          Length = 730

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/663 (63%), Positives = 516/663 (77%), Gaps = 7/663 (1%)

Query: 16  PYGSWESPISAAAVSAAGRTVEGLAVAGDGRLLWVETRPEEGGRAVLVKEAAEPGGDAVD 75
           PYGSW+SPI+A  VS A + + G AV   GRL+ +E+RP E GR VLV +    G  ++D
Sbjct: 71  PYGSWKSPITADIVSGASKRLGGTAVDSHGRLVLLESRPNESGRGVLVLQ----GETSID 126

Query: 76  VTPEGFAVRSLAQEYGGGAFAVQGD-VVVFSNYSDQRLYKQTI--GDNSAQPLTPDYTGS 132
           +TP+ FAVR+L QEYGGGAF +  D  +VFSNY DQRLYKQ I   D+S +P+TPDY   
Sbjct: 127 ITPKDFAVRTLTQEYGGGAFQISSDDTLVFSNYKDQRLYKQDITDKDSSPKPITPDYGTP 186

Query: 133 VLRYADGVFDPHFCRYVTIMEDHRKDSSNPVTTIAAVTISDRDANEPTVLVSGNDFYAFP 192
            + YADGVFD  F RYVT+ ED R+D SNP+TTI  V +S     EP VLVSGNDFYAFP
Sbjct: 187 AVTYADGVFDSRFNRYVTVREDGRQDRSNPITTIVEVNLSGETLEEPKVLVSGNDFYAFP 246

Query: 193 RIDPIKRRMAWIEWSNPNMSWDKAQLWVGYFSEKGEVHNKICIAGGDPTLVESPTEPKWT 252
           R+DP   R+AWIEWS+PNM WDKA+LWVGY SE G +  ++C+AG DP  VESPTEPKW+
Sbjct: 247 RLDPKCERLAWIEWSHPNMPWDKAELWVGYISEGGNIDKRVCVAGCDPKYVESPTEPKWS 306

Query: 253 SKGELFFITDRESGFWNIYKWDEESNLIVQLYSLDAEFSKPMWIFGVSSYGFLGKDDTSN 312
           S+GELFF+TDR++G WNI+KW E +N +V +Y LD EF+KP+WIFG +SY  +   +  N
Sbjct: 307 SRGELFFVTDRKNGCWNIHKWIESTNEVVSVYPLDGEFAKPLWIFGTNSYEIIECSEEKN 366

Query: 313 KIVCCYRQNGRSCAGVLDHDSGSFSELDIPFSSVTNIVSGDGFFYVEGASATLPVSIAKV 372
            I C YRQ G+S  G++D   GS S LDIP +   +I  G+   YVEGASA LP S+A+V
Sbjct: 367 LIACSYRQKGKSYLGIVDDSQGSCSLLDIPLTDFDSITLGNQCLYVEGASAVLPPSVARV 426

Query: 373 TLDEKRKTATNFSIVWSSSEDVMQYASYFSLPEFMEFPTVVPGQKAYAYFYAPHNHIFQG 432
           TLD+ +  A +  IVWSSS DV++Y +YFS+PE +EFPT VPGQ AYAYFY P N ++  
Sbjct: 427 TLDQHKTKALSSEIVWSSSPDVLKYKAYFSVPELIEFPTEVPGQNAYAYFYPPTNPLYNA 486

Query: 433 SSDEKPPLLVRTHGGPTDEARGVLDLGVQYWTSRGWAFVDVNYGGSTGYGRKFRERLLGQ 492
           S +EKPPLLV++HGGPT E+RG L+L +QYWTSRGWAFVDVNYGGSTGYGR++RERLL Q
Sbjct: 487 SMEEKPPLLVKSHGGPTAESRGSLNLNIQYWTSRGWAFVDVNYGGSTGYGREYRERLLRQ 546

Query: 493 WGVVDVNDCCSCATFLVETGRVDAQRLCVTGESAGGFTTLACLAFRQIFKAGSSLYGIAD 552
           WG+VDV+DCC CA +LV +G+ D +RLC++G SAGG+TTLA LAFR +FKAG+SLYG+AD
Sbjct: 547 WGIVDVDDCCGCAKYLVSSGKADVKRLCISGGSAGGYTTLASLAFRDVFKAGASLYGVAD 606

Query: 553 LASLRAGMHKFEAYYIDNLVGNRKAYFERSPINFVDRFSCPIILFQGLEDTVVSPVQATT 612
           L  L+   HKFE+ YIDNLVG+ K ++ERSPINFVD+FSCPIILFQGLED VV+P Q+  
Sbjct: 607 LKMLKEEGHKFESRYIDNLVGDEKDFYERSPINFVDKFSCPIILFQGLEDKVVTPDQSRK 666

Query: 613 IYKAIKDKGLPVALVEYEGEQHGFRKAENIKFTLEQQMVFFARLVGHFKVADGITPIKID 672
           IY+A+K KGLPVALVEYEGEQHGFRKAENIK+TLEQQMVFFAR+VG FKVAD ITP+KID
Sbjct: 667 IYEALKKKGLPVALVEYEGEQHGFRKAENIKYTLEQQMVFFARVVGGFKVADDITPLKID 726

Query: 673 NFD 675
           NFD
Sbjct: 727 NFD 729



>AT4G14570.1 | chr4:8362586-8366525 FORWARD LENGTH=765
          Length = 764

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 14/215 (6%)

Query: 439 PLLVRTHGGPTDEARGVLDLGVQYWTSRGWAFVDVNYGGSTGYGRKFRERLLGQWGVVDV 498
           PL+   HGGP   +       + Y +S G++ + +NY GS GYG    + L G+ G  DV
Sbjct: 532 PLIAVLHGGPHSVSPCSFSRTMAYLSSIGYSQLIINYRGSLGYGEDALQSLPGKVGSQDV 591

Query: 499 NDCCSCATFLVETGRVDAQRLCVTGESAGGFTTLACLA-FRQIFKAGSSLYGIADLASLR 557
            DC       +E G  D  R+ V G S GGF T   +      F A ++   + ++AS+ 
Sbjct: 592 KDCLLAVDHAIEMGIADPSRITVLGGSHGGFLTTHLIGQAPDKFVAAAARNPVCNMASM- 650

Query: 558 AGMHKFEAYYIDNLVGNRKAYFE------------RSPINFVDRFSCPIILFQGLEDTVV 605
            G+     +      G++  Y E             SPI+ + +   P +   G +D  V
Sbjct: 651 VGITDIPDWCFFEAYGDQSHYTEAPSAEDLSRFHQMSPISHISKVKTPTLFLLGTKDLRV 710

Query: 606 SPVQATTIYKAIKDKGLPVALVEYEGEQHGFRKAE 640
                    +A+K+KG+ V ++ +  + H   + +
Sbjct: 711 PISNGFQYVRALKEKGVEVKVLVFPNDNHPLDRPQ 745



>AT5G24260.1 | chr5:8234865-8237810 REVERSE LENGTH=747
          Length = 746

 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 26/263 (9%)

Query: 404 PEFMEFPTVVPGQKAYAYFYAPHNHIFQGSSDEKPP--LLVRTHGGPT-----DEARGVL 456
           PEF++          Y   Y P +  F       PP   ++  +GGP+     D     +
Sbjct: 492 PEFVQIQANDGKTTLYGAVYKPDSSKFG-----PPPYKTMINVYGGPSVQLVYDSWINTV 546

Query: 457 DLGVQYWTSRGWAFVDVNYGGSTGYGRKFRERLLGQWGVVDVNDCCSCATFLVETGRVDA 516
           D+  QY  SRG     ++  G+   G KF   +    G VD  D  + A +L+E G    
Sbjct: 547 DMRTQYLRSRGILVWKLDNRGTARRGLKFESWMKHNCGYVDAEDQVTGAKWLIEQGLAKP 606

Query: 517 QRLCVTGESAGGFTTLACLA-FRQIFKAGSSLYGIADLASLRAGMHKFEAYYIDNLVG-- 573
             + V G S GG+ +   L  + +IF    S        +       ++++Y +  +G  
Sbjct: 607 DHIGVYGWSYGGYLSATLLTRYPEIFNCAVS-------GAPVTSWDGYDSFYTEKYMGLP 659

Query: 574 -NRKAYFERSPINFVDRFS--CPIILFQGLEDTVVSPVQATTIYKAIKDKGLPVALVEYE 630
              + Y + S ++ V   +    ++L  G+ D  V       +  A+ + G    L+ + 
Sbjct: 660 TEEERYLKSSVMHHVGNLTDKQKLMLVHGMIDENVHFRHTARLVNALVEAGKRYELLIFP 719

Query: 631 GEQHGFRKAENIKFTLEQQMVFF 653
            E+H  RK ++ +  +EQ++  F
Sbjct: 720 DERHMPRKKKD-RIYMEQRIWEF 741



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,939,728
Number of extensions: 731033
Number of successful extensions: 1459
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1455
Number of HSP's successfully gapped: 3
Length of query: 679
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 574
Effective length of database: 8,227,889
Effective search space: 4722808286
Effective search space used: 4722808286
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)