BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0209300 Os06g0209300|AK065500
(548 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G77800.1 | chr1:29253800-29260190 FORWARD LENGTH=1376 360 e-100
AT1G05830.1 | chr1:1754452-1761225 FORWARD LENGTH=1084 89 6e-18
AT2G31650.1 | chr2:13455448-13462181 REVERSE LENGTH=1063 87 2e-17
AT3G14740.2 | chr3:4952185-4953306 REVERSE LENGTH=344 57 2e-08
AT5G53430.1 | chr5:21677623-21683166 FORWARD LENGTH=1044 57 3e-08
AT4G27910.1 | chr4:13894694-13900256 FORWARD LENGTH=1028 57 3e-08
AT3G61740.1 | chr3:22851133-22856548 REVERSE LENGTH=1019 56 6e-08
>AT1G77800.1 | chr1:29253800-29260190 FORWARD LENGTH=1376
Length = 1375
Score = 360 bits (925), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/537 (40%), Positives = 309/537 (57%), Gaps = 44/537 (8%)
Query: 15 FAEDLVLKIVQSLSHDLDSFNKRKWDHIIANQFLRDLREAKKRGNTERRHKEXXXXXXXX 74
+++LV ++ + L ++D + R+WD ++ N++ D+REA+K+G E+R+K+
Sbjct: 827 LSDNLVYEVAKKLPLEIDEQHGRRWDDVLVNKYFHDVREARKQGRKEQRNKQAQAVLAAA 886
Query: 75 XRCILPTSRNAPVRKVAECDVLSAKQESVPVAVPAKQEVHSPKQESIPKFNTGSSRVSQL 134
+SRN +RK +E PA+QE+ + +++ + GSS +
Sbjct: 887 TAAAATSSRNTSLRK-------DMSEE------PAQQEMSTSRRKVV-----GSSHLVPQ 928
Query: 135 I--SVQQANDSSPNSKVSADANIGSFDLAKFSKKNALPCDICMRSETVLNRIFVCSSCKA 192
S+ + S P S+ +D + F + +N CDIC RSET+ N I VCSSCK
Sbjct: 929 TKESLLKMAVSGPPSEKRSDHHTPDFLV-----ENPRTCDICRRSETIWNLIVVCSSCKV 983
Query: 193 AVHLDCYRSVTNPTGPWKCELCQEMPSDVVAGSQSDCDGSKP-CLLQCDLCHGTSGAFRK 251
AVH+DCY+ TGPW CELC E S+ S G KP +C LC GT+GAFRK
Sbjct: 984 AVHIDCYKCAKESTGPWYCELCAESSSE-----PSFNFGEKPNSSTECTLCGGTTGAFRK 1038
Query: 252 TIKGRCIHAFCAEWLLESTFTRGQYNAVDGMESLPKDKDTCAICHRNVGSCLKCSTVDCQ 311
T G+ +HAFCAEW LESTF RGQ N V GMESL K D C +C R G+C KCS +CQ
Sbjct: 1039 TTNGQWVHAFCAEWSLESTFRRGQINPVQGMESLAKKTDNCCVCQRIYGACTKCSYGNCQ 1098
Query: 312 ITFHPTCARDAGFYMDTKTIGSTLEHKAYCGKHGIEQRKADLLQLHGPEEVKNMKQMRVD 371
TFHP+CAR AGF+M T G HKAYC KH +EQ+ Q HG EE+K++K RV+
Sbjct: 1099 TTFHPSCARSAGFHM---TGGGKHPHKAYCEKHSMEQKAKAESQKHGAEELKSLKHYRVE 1155
Query: 372 LEVLRLICERVVKREKLKKDLVVCGHDTLAARRNSIAYSTRTSYCGSGPGASSESATTSV 431
LE LRL+CER+VKREKLK++L + H+ LAA+R+ A S P SS+SATTS+
Sbjct: 1156 LERLRLLCERIVKREKLKRELAISSHEILAAKRDHAARPLHVRNPFSPPEVSSDSATTSI 1215
Query: 432 ------NNSYSGLMQRTDDVAVDSIISRKPTVRFSLNNSDADRNTADSSTSSISYKQKLD 485
N S S +QR+DD+ +DS ++ K + L D D+ T DS+TS + +KL
Sbjct: 1216 KGHPDSNISGSEAIQRSDDITIDSTVTDKRRGKGPL-LMDTDQKTDDSATSKSRFSRKLT 1274
Query: 486 DRESLADKNLPKKP-ATAMQISEEGETKSSDKKN--QRPPKSIVYTRRSALSKKRQL 539
+R+ L+ K +P+K + +SE+G+ S KK + K +V T A K R+L
Sbjct: 1275 ERQILSGKTVPRKHCIVSPSVSEDGDNGSKPKKQHVETFAKELVMTSDEASFKNRRL 1331
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 50/229 (21%)
Query: 149 VSADANIGSFDLAKFSKKNALPCDICMRSETVLNRIFVCSSCKAAVHLDCYRSVTNPTGP 208
+ +DA +G +A + NAL CD C T +++ VC+SCKA VH CY + + P
Sbjct: 263 LGSDAGLGKLMVAAPCEGNALLCDFCC---TGHHQLIVCTSCKATVHKKCYGLLEDSGKP 319
Query: 209 WKCELCQEMPSDVVAGSQSDCDGSKPCLLQCDLCHGTSGAFR----KTIKG---RCIHAF 261
W C C+ D +PCL LC G + KT G H F
Sbjct: 320 WLCSWCEL--------ENGRADSERPCL----LCPKKGGILKPVLSKTENGGPAEFAHLF 367
Query: 262 CAEWLLESTFTRGQYNAVDGMESLPKDKDT-----CAICHRNVGSCLKCSTV-------- 308
C+ W+ E ++ + + P K+T C +C G+C++C V
Sbjct: 368 CSLWMPEVYIE--DLKKMEPILNFPGIKETRRKLLCNLCKVKSGACIRCCNVVVLTLSMP 425
Query: 309 -----------DCQITFHPTCARDAGFYMDT--KTIGSTLEHKAYCGKH 344
C + + A +AG ++ K T+E +A+C KH
Sbjct: 426 DNPIVWIIFTGKCFVGIYYHNAVEAGNRLEVWGKHGCDTVELRAFCSKH 474
>AT1G05830.1 | chr1:1754452-1761225 FORWARD LENGTH=1084
Length = 1083
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 124 FNTGSSRVSQLISVQQANDSSPNSKVSA---------DANIGSFDLAKFSKKNALPCDIC 174
F + V +LI Q S P SKVS D G + + K+ C++C
Sbjct: 576 FGFSNPEVDKLI--QGLLQSRPPSKVSQRKYSSGKYQDHPTG-YRPVRVEWKDLDKCNVC 632
Query: 175 MRSETVLNRIFV-CSSCKAAVHLDCYRSVTNPTGP-WKCELCQEMPSDVVAGSQSDCDGS 232
E N +F+ C C+ VH CY + G W C LC+ + D+
Sbjct: 633 HMDEEYENNLFLQCDKCRMMVHTRCYGQLEPHNGILWLCNLCRPVALDIPP--------- 683
Query: 233 KPCLLQCDLCHGTSGAFRKTIKGRCIHAFCAEWLLESTFTR-GQYNAVDGMESLPKD--K 289
+C LC GA + T GR H CA W+ E+ + +DG++ + KD K
Sbjct: 684 -----RCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLLDVKKMEPIDGVKKVSKDRWK 738
Query: 290 DTCAICHRNVGSCLKCSTVDCQITFHPTCARDAGF 324
C+IC + G+C++CS C++ +HP CAR AG
Sbjct: 739 LLCSICGVSYGACIQCSNNTCRVAYHPLCARAAGL 773
>AT2G31650.1 | chr2:13455448-13462181 REVERSE LENGTH=1063
Length = 1062
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 124 FNTGSSRVSQLISVQQANDSSPNSKVSADAN-IG-------SFDLAKFSKKNALPCDICM 175
F + V +L VQ + S P+S VS N +G + + K+ C++C
Sbjct: 559 FGLSNPEVIKL--VQDLSKSRPSSHVSMCKNSLGRHQNQPTGYRPVRVDWKDLDKCNVCH 616
Query: 176 RSETVLNRIFV-CSSCKAAVHLDCYRSVTNPTGP-WKCELCQEMPSDVVAGSQSDCDGSK 233
E N +F+ C C+ VH CY + G W C LC+ D+
Sbjct: 617 MDEEYENNLFLQCDKCRMMVHAKCYGELEPCDGALWLCNLCRPGAPDMPP---------- 666
Query: 234 PCLLQCDLCHGTSGAFRKTIKGRCIHAFCAEWLLESTFTR-GQYNAVDGMESLPKD--KD 290
+C LC GA + T GR H CA W+ E+ + + +DG+ + KD K
Sbjct: 667 ----RCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLSDVKKMEPIDGVNKVSKDRWKL 722
Query: 291 TCAICHRNVGSCLKCSTVDCQITFHPTCARDAGF 324
C IC + G+C++CS C++ +HP CAR AG
Sbjct: 723 MCTICGVSYGACIQCSNNSCRVAYHPLCARAAGL 756
>AT3G14740.2 | chr3:4952185-4953306 REVERSE LENGTH=344
Length = 343
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 166 KNALPCDICMRSE-TVLNRIFVCSSCKAAVHLDCYRSV---TNPTGPWKCELCQEMPSDV 221
++ + C +C ++ LN I C C VH CY + P G W C C
Sbjct: 148 EDGIMCAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLS----- 202
Query: 222 VAGSQSDCDGSKPCLLQCDLCHGTSGAFRKTIKGRCIHAFCAEWLLESTFTRGQ-YNAVD 280
++ + C LC GA + T GR H CA ++ E F + +
Sbjct: 203 --------SKNREKIFSCCLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREGIC 254
Query: 281 GMESLPKD-KDTCAICHRNVGSCLKCSTVDCQITFHPTCARDAGF---YMDTKTIGSTLE 336
E L K KD C +C G ++CS + C++ FH TC Y + K G +
Sbjct: 255 CSEVLSKRWKDRCYLCKVRRGCVIECSEMRCKLAFHVTCGLKEDLCIEYREGKKSGGIV- 313
Query: 337 HKAYCGKH 344
+C +H
Sbjct: 314 -VGFCNEH 320
>AT5G53430.1 | chr5:21677623-21683166 FORWARD LENGTH=1044
Length = 1043
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 171 CDICMRSETV-LNRIFVCSSCKAAVHLDCY--RSVTNPTGPWKCELCQEMPSDVVAGSQS 227
C +C E N+I +C+ C+ AVH +CY R+V + T W C+ C E P
Sbjct: 610 CAVCRWVEDWDYNKIIICNRCQIAVHQECYGTRNVRDFTS-WVCKAC-ETPE-------- 659
Query: 228 DCDGSKPCLLQCDLCHGTSGAFRKT-IKGRCIHAFCAEWLLESTF-TRGQYNAVDGMESL 285
+C LC GA + T ++ +H CA + E F + + G+ S+
Sbjct: 660 -------IKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPALGILSI 712
Query: 286 PKDK--DTCAICHRNVGSCLKCSTVDCQITFHPTCARDAGFYMD 327
P C IC + GSC +C C +H CA AG+ M+
Sbjct: 713 PSSNFVKICVICKQIHGSCTQC--CKCSTYYHAMCASRAGYRME 754
>AT4G27910.1 | chr4:13894694-13900256 FORWARD LENGTH=1028
Length = 1027
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 171 CDICMRSETV-LNRIFVCSSCKAAVHLDCY--RSVTNPTGPWKCELCQEMPSDVVAGSQS 227
C +C E N+I +C+ C+ AVH +CY R V + T W C+ C+ D+
Sbjct: 595 CAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVRDFTS-WVCKACER--PDIKR---- 647
Query: 228 DCDGSKPCLLQCDLCHGTSGAFRKT-IKGRCIHAFCAEWLLESTF-TRGQYNAVDGMESL 285
+C LC GA + T ++ +H CA + E F + + G+ S+
Sbjct: 648 ----------ECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSI 697
Query: 286 PKDK--DTCAICHRNVGSCLKCSTVDCQITFHPTCARDAGFYMDT----KTIGSTLEHKA 339
P C IC + GSC +C C +H CA AG+ M+ K + +
Sbjct: 698 PSTNFVKICVICKQIHGSCTQC--CKCSTYYHAMCASRAGYRMELHCLEKNGQQITKMVS 755
Query: 340 YCGKH 344
YC H
Sbjct: 756 YCAYH 760
>AT3G61740.1 | chr3:22851133-22856548 REVERSE LENGTH=1019
Length = 1018
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 35/205 (17%)
Query: 171 CDICMRSETVL-NRIFVCSSCKAAVHLDCYR-SVTNPTGPWKCELCQEMPSDVVAGSQSD 228
C +C E N++ +C+ C+ AVH +CY S + W C C E P D+ + D
Sbjct: 549 CAVCRWVEDWEENKMIICNRCQVAVHQECYGVSKSQDLTSWVCRAC-ETP-DI----ERD 602
Query: 229 CDGSKPCLLQCDLCHGTSGAFRKT-IKGRCIHAFCAEWLLESTFTRGQ-YNAVDGMESLP 286
C C LC GA + + ++G +H CA + E F + G+ +P
Sbjct: 603 C-----C-----LCPVKGGALKPSDVEGLWVHVTCAWFRPEVGFLNHENMEPAVGLFKIP 652
Query: 287 KDK--DTCAICHRNVGSCLKCSTVDCQITFHPTCARDAGFYMDTKTI---GSTLEHKA-Y 340
+ C IC + GSC+ C C FH CA AG+ M+ + G K+ Y
Sbjct: 653 ANSFLKVCTICKQTHGSCVHC--CKCATHFHAMCASRAGYNMELHCLEKNGVQRTRKSVY 710
Query: 341 CGKHGIEQRKAD---LLQLHGPEEV 362
C H RK D ++ +H P V
Sbjct: 711 CSFH----RKPDPDSVVVVHTPSGV 731
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.129 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,695,291
Number of extensions: 489186
Number of successful extensions: 2182
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2168
Number of HSP's successfully gapped: 8
Length of query: 548
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 445
Effective length of database: 8,282,721
Effective search space: 3685810845
Effective search space used: 3685810845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)