BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0203600 Os06g0203600|AK121461
         (428 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26310.1  | chr2:11201770-11203919 FORWARD LENGTH=399          283   1e-76
AT3G63170.1  | chr3:23334675-23335993 FORWARD LENGTH=280          145   4e-35

>AT2G26310.1 | chr2:11201770-11203919 FORWARD LENGTH=399
          Length = 398

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/376 (42%), Positives = 234/376 (62%), Gaps = 20/376 (5%)

Query: 63  EAFDRLNKFARAFCYWLSRVSNPKNLRRLMSMEGPSSGACQSH--INHLSSRMQNLAVLQ 120
           EAF  ++KF  A   W S      NL++ +S +      C+S   + H+    +N++V  
Sbjct: 33  EAFSCISKFTGALLCWFSH----GNLQKEVS-KHQWGLTCKSRDSLKHVFEH-RNVSVFP 86

Query: 121 FGYLVREEHAVQLLLANFASTTLGRLWNDFQQQHACNVLTLAGAMAIVPPLENISLKTLA 180
           F Y+ ++         N + +T+    N+ ++ H+C++L+LA AM  +P L  +S   LA
Sbjct: 87  FHYVSKD--ISPGFFGNISKSTIQHFVNEAERLHSCSLLSLAAAM--IPSLNVMSANGLA 142

Query: 181 ESMALGNIK-----DYVSRPMDKPY--LEDKCIKSRSVAVPSTIFQGDAIEPKTGIKFPA 233
             +   ++K     ++ + P +  +   +  C +   ++     +   ++EP+TGI+FP 
Sbjct: 143 LPLGSNDVKLRENIEHRTCPENTEHRTCQVGCEEYSGLSFQKLDWTRQSVEPRTGIEFPM 202

Query: 234 FLEDDSSPSTT-VLVGMGFKGVKVMRVKNLDLYAFGLYLQPNTISEKLGPKYASVPTINL 292
            L++++S S + VLV  G + +K++R+K+L +YAFG Y+ P+++ +KLG KYASVP   L
Sbjct: 203 LLKENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGRKYASVPASKL 262

Query: 293 KDNPDFYDDLLRENLPMRVRLVLHYNGLSIGAVRDVFEKSLGLRLQKMNPNTDYHCLKTF 352
               D Y DLLRE++ M VRLV++YNGL I  VRDVFEKSL  RL K NP TD++CL  F
Sbjct: 263 DKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVKANPKTDFNCLNDF 322

Query: 353 GSYFNEDIPIPAGTKIDFCQTSDGQLITEIDGRQIGAVKSKDLCRALFGMYIGDSPVSLQ 412
           GS+F +DIPIPAGT IDF +T DGQLITEI G  IGAV+SKDLCRA FGMYIGD PVS Q
Sbjct: 323 GSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLIGAVRSKDLCRAFFGMYIGDVPVSEQ 382

Query: 413 AKKDIAQNVAGLIGKC 428
            K++I + V G+I +C
Sbjct: 383 TKEEIGRKVVGIIKRC 398



>AT3G63170.1 | chr3:23334675-23335993 FORWARD LENGTH=280
          Length = 279

 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 130/235 (55%), Gaps = 8/235 (3%)

Query: 193 SRPMDKPYLEDKCIKSRSVAVPS---TIFQGDAIEPKTGIKFPAFLEDDSSPSTTVLVGM 249
           SR    P LE      RS   P    T+     +EPKTG  FPA + D     +  L+G+
Sbjct: 46  SRNPSHPILEWAFSSHRSSLSPWGSITLADESVVEPKTGFSFPASIGD-----SRRLLGV 100

Query: 250 GFKGVKVMRVKNLDLYAFGLYLQPNTISEKLGPKYASVPTINLKDNPDFYDDLLRENLPM 309
           G +   ++ +KN+D+YAFG+Y   + + + +G KYA++P   ++ N  F DDL+  ++ M
Sbjct: 101 GLRKKSLLGLKNIDVYAFGVYADCDDVKKLVGDKYANLPASEIRGNKSFMDDLMEADIKM 160

Query: 310 RVRLVLHYNGLSIGAVRDVFEKSLGLRLQKMNPNTDYHCLKTFGSYFNEDIPIPAGTKID 369
            +RL + Y  L+I +VR+ F++S+G RL+K   + +   L++F S F ++  IP  + ID
Sbjct: 161 TIRLQIVYGKLNIRSVRNAFQESVGNRLKKFGGSDNDELLQSFTSLFKDEYKIPRNSTID 220

Query: 370 FCQTSDGQLITEIDGRQIGAVKSKDLCRALFGMYIGDSPVSLQAKKDIAQNVAGL 424
             +     L   I+G  +G+VKS  LCR++  +YIG+ P    A++D   N A L
Sbjct: 221 LTKDPGHVLSVAIEGNHVGSVKSHLLCRSILDLYIGEEPFDKNAREDFLDNAASL 275



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.321    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,325,425
Number of extensions: 389950
Number of successful extensions: 829
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 825
Number of HSP's successfully gapped: 2
Length of query: 428
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 327
Effective length of database: 8,337,553
Effective search space: 2726379831
Effective search space used: 2726379831
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)