BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0174400 Os06g0174400|AK065311
(221 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11150.1 | chr5:3546625-3547844 REVERSE LENGTH=222 351 1e-97
AT4G32150.1 | chr4:15526407-15527651 REVERSE LENGTH=220 334 2e-92
AT2G25340.1 | chr2:10792664-10793832 REVERSE LENGTH=220 323 4e-89
AT5G22360.1 | chr5:7404379-7405654 REVERSE LENGTH=222 272 1e-73
AT3G54300.1 | chr3:20108355-20110127 REVERSE LENGTH=241 147 4e-36
AT1G04760.1 | chr1:1334760-1336070 FORWARD LENGTH=221 144 3e-35
AT1G04750.1 | chr1:1331857-1333426 REVERSE LENGTH=220 136 8e-33
AT2G32670.1 | chr2:13857941-13859346 FORWARD LENGTH=286 136 1e-32
AT4G15780.1 | chr4:8980081-8981697 REVERSE LENGTH=223 134 3e-32
AT2G33120.2 | chr2:14043785-14045337 REVERSE LENGTH=230 128 2e-30
AT2G33110.1 | chr2:14041297-14042892 REVERSE LENGTH=218 110 6e-25
AT5G58180.1 | chr5:23544011-23545157 FORWARD LENGTH=200 61 6e-10
AT5G58060.2 | chr5:23498277-23500128 FORWARD LENGTH=222 58 4e-09
AT1G11890.1 | chr1:4011509-4012835 FORWARD LENGTH=219 50 7e-07
>AT5G11150.1 | chr5:3546625-3547844 REVERSE LENGTH=222
Length = 221
Score = 351 bits (901), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 195/221 (88%)
Query: 1 MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD 60
MAI++A+VARGTVVL+E SA +TNA ++++Q+LE+LPG +DSH+SY+QDRY+FH KRTD
Sbjct: 1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTD 60
Query: 61 GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS 120
G+T LCMADE AGR IPFAFL+DIH RFVKTYGRA ++ AY MNDEFSRVLSQQM++YS
Sbjct: 61 GLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYS 120
Query: 121 NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
NDPNADR++R++GE+SQVR VMI+NIDKVL+RG+RL++LVDKT NMQGNT RF++QARR+
Sbjct: 121 NDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRY 180
Query: 181 RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFTLPTCIR 221
R WWRNVKLTIALI +L +++Y+ + F+CHG +LP+C +
Sbjct: 181 RTIMWWRNVKLTIALILVLALVVYIAMAFVCHGPSLPSCFK 221
>AT4G32150.1 | chr4:15526407-15527651 REVERSE LENGTH=220
Length = 219
Score = 334 bits (857), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/220 (73%), Positives = 195/220 (88%), Gaps = 1/220 (0%)
Query: 1 MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD 60
MAILYA+VARGTVVL+E +A +TNA +A+Q+LE++PG DS+VSY+QDRYVFH KRTD
Sbjct: 1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDN-DSNVSYSQDRYVFHVKRTD 59
Query: 61 GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS 120
G+T LCMA+E AGRRIPFAFLEDIH RFV+TYGRA T+LAY MN+EFSRVLSQQ+DYYS
Sbjct: 60 GLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYS 119
Query: 121 NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
NDPNADRINR++GE++QVR VMI+NIDKVL+RG+RL++LVDKTANMQGNT RF++QARRF
Sbjct: 120 NDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRF 179
Query: 181 RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFTLPTCI 220
R+ WWRN KLT+ LI LL VIIY+ + F+CHG TLP+CI
Sbjct: 180 RSNVWWRNCKLTVLLILLLLVIIYIAVAFLCHGPTLPSCI 219
>AT2G25340.1 | chr2:10792664-10793832 REVERSE LENGTH=220
Length = 219
Score = 323 bits (828), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 154/220 (70%), Positives = 190/220 (86%), Gaps = 1/220 (0%)
Query: 1 MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD 60
M+ILYA+VARGTVVLAE S +TNA +A+Q+LE++PG G DSHVSY+QDRYVFH KRTD
Sbjct: 1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNG-DSHVSYSQDRYVFHVKRTD 59
Query: 61 GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS 120
G+T LCMADE AGRRIPF+FLEDIH RFV+TYGRA ++ AY MNDEFSRVL+QQ++YYS
Sbjct: 60 GLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYS 119
Query: 121 NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
NDPNAD I+R++GE++QVR VMI+NID +L+RG+RL++LVDKTANMQGNT RF++Q RRF
Sbjct: 120 NDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRF 179
Query: 181 RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFTLPTCI 220
NT WWRN KLT+ LI +L VIIY+ + F CHG TLP+C+
Sbjct: 180 NNTVWWRNCKLTLLLILVLLVIIYIGVAFACHGPTLPSCV 219
>AT5G22360.1 | chr5:7404379-7405654 REVERSE LENGTH=222
Length = 221
Score = 272 bits (696), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 115/219 (52%), Positives = 170/219 (77%)
Query: 1 MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD 60
MAI+YAVVARGTVVLAE SA N GAV R++LE+L +D + ++QDRY+FH R+D
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSD 60
Query: 61 GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS 120
G+T LCMA++ GRR+PF++LE+IH RF+K YG+ A + AY MNDEFSRVL QQM+++S
Sbjct: 61 GLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFS 120
Query: 121 NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
++P+ D +NR+RGE+S++R+VM++NI+K++ERGDR+++LVDKTA MQ ++ F++Q++R
Sbjct: 121 SNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRL 180
Query: 181 RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFTLPTC 219
R W +N KL + L L+ ++Y+++ C G TLP+C
Sbjct: 181 RRALWMKNAKLLVLLTCLIVFLLYIIIASFCGGITLPSC 219
>AT3G54300.1 | chr3:20108355-20110127 REVERSE LENGTH=241
Length = 240
Score = 147 bits (371), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 132/234 (56%), Gaps = 23/234 (9%)
Query: 2 AILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDG 61
++Y+ VA+GTVVLAEH+ + N +A Q L++LP S +Y+ D + F+ +G
Sbjct: 5 GLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNS--SKYTYSCDGHTFNFLVDNG 62
Query: 62 ITALCMADEAAGRRIPFAFLEDIHGRFVKTYG-------RAALT-------------SLA 101
L +ADE+ GR +PF FLE + F K Y R L S+A
Sbjct: 63 FVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVA 122
Query: 102 YGMNDEFSRVLSQQMDYYSNDPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLV 160
Y ++ EF +L + M Y + P ++++++ +I++V+ +M+DNI+KVL+RG+++++LV
Sbjct: 123 YNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLV 182
Query: 161 DKTANMQGNTIRFKRQARRFRNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGF 214
DKT N+Q F+RQ R+ R W +++++ + + + I +V V C GF
Sbjct: 183 DKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGF 236
>AT1G04760.1 | chr1:1334760-1336070 FORWARD LENGTH=221
Length = 220
Score = 144 bits (363), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 136/215 (63%), Gaps = 4/215 (1%)
Query: 2 AILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDG 61
+++Y+ VARGTV+LAE++ N +VA Q L++LP +++ +Y D + F+ +G
Sbjct: 5 SLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPS--SNNKFTYNCDGHTFNYLADNG 62
Query: 62 ITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRA-ALTSLAYGMNDEFSRVLSQQMDYYS 120
T + E+AGR+IP AFLE + F K YG A T+ A +N EF L + M Y +
Sbjct: 63 FTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCA 122
Query: 121 NDPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARR 179
+ P ++++++ ++++V+ VM++NI+KVL+RG+++++LVDKT N++ F+ Q +
Sbjct: 123 DHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTK 182
Query: 180 FRNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGF 214
+ W+ N+K+ + + ++ +I ++++ +CHGF
Sbjct: 183 MKRKLWFENMKIKLIVFGIIVALILIIILSVCHGF 217
>AT1G04750.1 | chr1:1331857-1333426 REVERSE LENGTH=220
Length = 219
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 134/215 (62%), Gaps = 4/215 (1%)
Query: 2 AILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDG 61
+++Y+ VARGTV+L E + N ++A Q L++LP +++ +Y D + F+ DG
Sbjct: 5 SLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPS--SNNKFTYNCDGHTFNYLVEDG 62
Query: 62 ITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRA-ALTSLAYGMNDEFSRVLSQQMDYYS 120
T +A ++AGR+IP +FLE + F K YG A T+ A +N EF L + M Y
Sbjct: 63 FTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCM 122
Query: 121 NDPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARR 179
+ P+ ++ +++ ++S+V+ VM++NI+KVL+RG+++++LVDKT N++ F+ +
Sbjct: 123 DHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQ 182
Query: 180 FRNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGF 214
R W +N+K+ + ++ ++ +I ++++ +CHGF
Sbjct: 183 MRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGF 217
>AT2G32670.1 | chr2:13857941-13859346 FORWARD LENGTH=286
Length = 285
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 133/214 (62%), Gaps = 4/214 (1%)
Query: 3 ILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDGI 62
++Y+ VARGTV+L E++ N AVA Q L++LP +++ +Y D + F+ +G
Sbjct: 71 LIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPS--SNNKFTYNCDGHTFNYLVENGF 128
Query: 63 TALCMADEAAGRRIPFAFLEDIHGRFVKTYGRA-ALTSLAYGMNDEFSRVLSQQMDYYSN 121
T +A E+ GR+IP AFLE + F K YG A T+ A +N EF L + M Y +
Sbjct: 129 TYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVD 188
Query: 122 DPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
P+ ++ +++ ++++V+ VM++NI+KVL+RG+++++LVDKT N++ F+ Q +
Sbjct: 189 HPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKI 248
Query: 181 RNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGF 214
R W+ N+K+ + ++ ++ +I ++++ +C GF
Sbjct: 249 RRKMWFENMKIKLIVLGIIITLILIIILSVCGGF 282
>AT4G15780.1 | chr4:8980081-8981697 REVERSE LENGTH=223
Length = 222
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 133/215 (61%), Gaps = 3/215 (1%)
Query: 2 AILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDG 61
+ +Y+ VARGT++LAE++ N ++A Q L++LP ++S +Y D + F+ DG
Sbjct: 5 SFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSS-SNSKFTYNCDHHTFNFLVEDG 63
Query: 62 ITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRA-ALTSLAYGMNDEFSRVLSQQMDYYS 120
+A ++ ++I AFLE + F K YG A T++A +N EF V+ + M+Y
Sbjct: 64 YAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIV 123
Query: 121 NDPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARR 179
+ +++ +++ ++S+V+++M++NIDK ++RG+ L +L DKT N++ +K+Q +
Sbjct: 124 DHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAREYKKQGTQ 183
Query: 180 FRNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGF 214
R W++N+K+ + ++ +L +++ ++ + +CHGF
Sbjct: 184 VRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGF 218
>AT2G33120.2 | chr2:14043785-14045337 REVERSE LENGTH=230
Length = 229
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 136/224 (60%), Gaps = 12/224 (5%)
Query: 2 AILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDG 61
+++Y+ VARGTV+L E + N ++A Q L++LP +++ +Y D + F+ +G
Sbjct: 5 SLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPS--SNNKFTYNCDGHTFNYLVENG 62
Query: 62 --------ITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRA-ALTSLAYGMNDEFSRVL 112
I+ +A ++AGR+IP AFLE + F K YG A T+ A +N EF L
Sbjct: 63 FSESKYCSISYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKL 122
Query: 113 SQQMDYYSNDPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTI 171
+ M Y + P+ ++ +++ ++S+V+ VM++NI+KVL+RG+++++LVDKT N++
Sbjct: 123 KEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQ 182
Query: 172 RFKRQARRFRNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFT 215
F+ Q + R W++N+K+ + ++ ++ +I ++++ +C GF
Sbjct: 183 DFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFN 226
>AT2G33110.1 | chr2:14041297-14042892 REVERSE LENGTH=218
Length = 217
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 121/216 (56%), Gaps = 8/216 (3%)
Query: 2 AILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTDG 61
++ Y+ +ARGTV+L E + N +VA Q LE LP +++ +Y D + F+ +G
Sbjct: 5 SLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPS--SNNKFTYNCDGHTFNDLVENG 62
Query: 62 ITALCMADEAAGRRIPFAFLEDIHGRFVKTY-GRAALTSLAYGMNDEFSRVLSQQMDYYS 120
T +A ++AGR IP AFLE + F K Y G A T A +N EF L + M Y
Sbjct: 63 FTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCM 122
Query: 121 NDPNA-DRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARR 179
+ P+ + + + ++S+V+++M++NI+KVL RG +ML + Q I+ + R+
Sbjct: 123 DHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRK 182
Query: 180 FRNTTWWRNVKLTIALIFLLTVIIYVVLVFMCHGFT 215
W++N+K+ + ++ ++ +I ++++ +C GF
Sbjct: 183 ----KWFQNMKIKLIVLAIIIALILIIILSVCGGFN 214
>AT5G58180.1 | chr5:23544011-23545157 FORWARD LENGTH=200
Length = 199
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 28 VARQVLERLPGGGADSHVSYTQDRYVFHAKRTDGITALCMADEAAGRRIPFAFLEDIHGR 87
+AR V R P G S + Y HA +G+ A+ D+ R F+ L +
Sbjct: 47 IARTVARRTPPG---QRQSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDV 103
Query: 88 FVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYSNDPNADRINRMRGEISQVRTVMIDNID 147
+ K YG + + + + L + D + + AD++ +++ E+ + + ++ ID
Sbjct: 104 YQKDYG----DTWRFENSSQPWPYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTID 159
Query: 148 KVLERGDRLDMLVDKTANMQGNTIRFKRQARR 179
VL RG++LD LV+K++ + + F +QA++
Sbjct: 160 GVLARGEKLDSLVEKSSELSLASKMFYKQAKK 191
>AT5G58060.2 | chr5:23498277-23500128 FORWARD LENGTH=222
Length = 221
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
Query: 53 VFHAKRTDGITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVL 112
+ HA +G+ A+ D+ R F+ L + + K++G + + A +++ L
Sbjct: 89 IVHAYNRNGLCAVGFMDDHYPVRSAFSLLNQVLDEYQKSFGESWRS--AKEDSNQPWPYL 146
Query: 113 SQQMDYYSNDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIR 172
++ ++ + + AD++ +++ E+ + + ++ ID VL RG++LD LV+K++++ +
Sbjct: 147 TEALNKFQDPAEADKLLKIQRELDETKIILHKTIDSVLARGEKLDSLVEKSSDLSMASQM 206
Query: 173 FKRQARR 179
F +QA++
Sbjct: 207 FYKQAKK 213
>AT1G11890.1 | chr1:4011509-4012835 FORWARD LENGTH=219
Length = 218
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 38 GGGADSHVSYTQDRYVFHAKRTDGITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAAL 97
G S +S YVFH + L M D + +++ F +LED+ F + G
Sbjct: 46 GQNDASRMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIE 105
Query: 98 TSLAYGMNDEFSRVLSQQMDYYSNDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLD 157
T+ +F + + Y + I ++ E+ +V +M N+ +VL G++LD
Sbjct: 106 TAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLD 165
Query: 158 MLVDKTANMQGNTIRFKRQARRFRNTTW---WRNVKLTIALIFLL 199
+ + ++ + + + +A+ W V + ++FLL
Sbjct: 166 QVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVFGVVFLL 210
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,245,503
Number of extensions: 158179
Number of successful extensions: 590
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 566
Number of HSP's successfully gapped: 14
Length of query: 221
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 126
Effective length of database: 8,502,049
Effective search space: 1071258174
Effective search space used: 1071258174
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 110 (47.0 bits)