BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0172800 Os06g0172800|J065102L01
(451 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20250.4 | chr5:6833730-6836635 FORWARD LENGTH=845 524 e-149
AT3G57520.1 | chr3:21288982-21292694 REVERSE LENGTH=774 436 e-122
AT1G55740.1 | chr1:20835507-20838707 REVERSE LENGTH=755 422 e-118
AT5G40390.1 | chr5:16161720-16165085 FORWARD LENGTH=784 285 4e-77
AT4G01970.1 | chr4:854073-856953 REVERSE LENGTH=877 161 8e-40
>AT5G20250.4 | chr5:6833730-6836635 FORWARD LENGTH=845
Length = 844
Score = 524 bits (1349), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/445 (59%), Positives = 318/445 (71%), Gaps = 19/445 (4%)
Query: 1 MTVTSSVKVAGGELSVHGRTVLSGVPEAVRXXXXXXXGPVDGVFLGGDFAEPASRHVVSL 60
MT+ +V+++ G L + RT+L+GVP+ V GPV+GVF+G F + S+H+V +
Sbjct: 96 MTIKPAVRISDGNLIIKNRTILTGVPDNVITTSASEAGPVEGVFVGAVFNKEESKHIVPI 155
Query: 61 GAMRGVRFMACFRFKLWWMAQRMGEKGGDVPHETQFLLVESKAGV----DGGGG----DA 112
G +R RFM+CFRFKLWWMAQRMGE G D+P+ETQFLLVES G DG G
Sbjct: 156 GTLRNSRFMSCFRFKLWWMAQRMGEMGRDIPYETQFLLVESNDGSHLESDGANGVECNQK 215
Query: 113 SYLVFLPLVEGAFRASLQGGGAGGDELQLCVESGDAGTRAASFDRALFVGAADSDPFXXX 172
Y VFLPL+EG+FR+ LQG DE++LC+ESGD T+ +SF +L++ A +DPF
Sbjct: 216 VYTVFLPLIEGSFRSCLQGNV--NDEVELCLESGDVDTKRSSFTHSLYIHAG-TDPFQTI 272
Query: 173 XXXXXXXKSCLKTFRIRAEKKLPGIVDYFGWCTWDAFYQDVTQEGVEAGLRSLTAGGAPP 232
K L +FR R EKKLPGIVDYFGWCTWDAFYQ+VTQEGVEAGL+SL AGG PP
Sbjct: 273 TDAIRTVKLHLNSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPP 332
Query: 233 KFVIIDDGWQSVGTDHQNPDDTGADAKDKQPLLARLTGIKENSKFQDGDDPAAGIKTVVR 292
KFVIIDDGWQSV D D K + P+ RLTGIKEN KF+ DDP GIK +V+
Sbjct: 333 KFVIIDDGWQSVERD---ATVEAGDEKKESPIF-RLTGIKENEKFKKKDDPNVGIKNIVK 388
Query: 293 AAKEKYGLKYVYVWHAITGYWGGVRPGVAGMEGYHSNMQFPNVSPGVVENEPGMKTDVLT 352
AKEK+GLKYVYVWHAITGYWGGVRPG E Y S M++PN+S GVVEN+P KTDV+T
Sbjct: 389 IAKEKHGLKYVYVWHAITGYWGGVRPG----EEYGSVMKYPNMSKGVVENDPTWKTDVMT 444
Query: 353 TQGLGLVHPRAVYRFYDELHAYLXXXXXXXXXXXXQCILETLGAGHGGRVSLTRQFHQAL 412
QGLGLV P+ VY+FY+ELH+YL QC+LETLG G GGRV LTRQFHQAL
Sbjct: 445 LQGLGLVSPKKVYKFYNELHSYLADAGVDGVKVDVQCVLETLGGGLGGRVELTRQFHQAL 504
Query: 413 DASIAKNFPENGIIACMSHHTDALY 437
D+S+AKNFP+NG IACMSH+TDALY
Sbjct: 505 DSSVAKNFPDNGCIACMSHNTDALY 529
>AT3G57520.1 | chr3:21288982-21292694 REVERSE LENGTH=774
Length = 773
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 283/442 (64%), Gaps = 11/442 (2%)
Query: 1 MTVTSSVKVAGGELSVHGRTVLSGVPEAVRXXXXXXXGPVDGVFLGGDFAEPASRHVVSL 60
MT+TS++ V L V G+T+L+ +P+ + G V G F+G F + S HV +
Sbjct: 1 MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPI 60
Query: 61 GAMRGVRFMACFRFKLWWMAQRMGEKGGDVPHETQFLLVESKAGVDGGGGDAS--YLVFL 118
G + G+RFM CFRFKLWWM QRMG G D+P ETQF+L+ESK V+G G DA Y VFL
Sbjct: 61 GVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFL 120
Query: 119 PLVEGAFRASLQGGGAGGDELQLCVESGDAGTRAASFDRALFVGAADSDPFXXXXXXXXX 178
PL+EG FRA LQG +E+++C ESGD + ++V A ++PF
Sbjct: 121 PLLEGQFRAVLQGNEK--NEIEICFESGDKAVETSQGTHLVYVHAG-TNPFEVIRQSVKA 177
Query: 179 XKSCLKTFRIRAEKKLPGIVDYFGWCTWDAFYQDVTQEGVEAGLRSLTAGGAPPKFVIID 238
+ ++TF R +KKLP +D+FGWCTWDAFY DVT EGV+ GL+SL+ GG PPKF+IID
Sbjct: 178 VERHMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIID 237
Query: 239 DGWQSVGTDHQNPDDTGADAKDKQPLLARLTGIKENSKFQDGDDP---AAGIKTVVRAAK 295
DGWQ + + D ++ RL GIKEN+KFQ D +G+K+VV AK
Sbjct: 238 DGWQQIENKEK---DENCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAK 294
Query: 296 EKYGLKYVYVWHAITGYWGGVRPGVAGMEGYHSNMQFPNVSPGVVENEPGMKTDVLTTQG 355
+++ +K VY WHA+ GYWGGV+P +GME Y S + +P SPGV+ N+P + D L G
Sbjct: 295 QRHNVKQVYAWHALAGYWGGVKPAASGMEHYDSALAYPVQSPGVLGNQPDIVMDSLAVHG 354
Query: 356 LGLVHPRAVYRFYDELHAYLXXXXXXXXXXXXQCILETLGAGHGGRVSLTRQFHQALDAS 415
LGLV+P+ V+ FY+ELH+YL Q I+ETLGAG GGRVSLTR + QAL+AS
Sbjct: 355 LGLVNPKKVFNFYNELHSYLASCGIDGVKVDVQNIIETLGAGLGGRVSLTRSYQQALEAS 414
Query: 416 IAKNFPENGIIACMSHHTDALY 437
IA+NF +NG I+CM H+TD LY
Sbjct: 415 IARNFTDNGCISCMCHNTDGLY 436
>AT1G55740.1 | chr1:20835507-20838707 REVERSE LENGTH=755
Length = 754
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/446 (50%), Positives = 284/446 (63%), Gaps = 15/446 (3%)
Query: 1 MTVTSSVKVAGGELSVHGRTVLSGVPEAVRXXXXXXXGPVDGVFLGGDFAEPASRHVVSL 60
MTV + + V +L V G VL GVPE V +DG F+G + S V SL
Sbjct: 1 MTVGAGISVTDSDLVVLGHRVLHGVPENVLVTPASGNALIDGAFIGVTSDQTGSHRVFSL 60
Query: 61 GAMRGVRFMACFRFKLWWMAQRMGEKGGDVPHETQFLLVESKAGVDGGGGD--ASYLVFL 118
G + +RFM FRFKLWWM QRMG G ++P ETQFL+VE+ G D GG D +SY+VFL
Sbjct: 61 GKLEDLRFMCVFRFKLWWMTQRMGTNGKEIPCETQFLIVEANQGSDLGGRDQSSSYVVFL 120
Query: 119 PLVEGAFRASLQGGGAGGDELQLCVESGDAGTRAASFDRALFVGAADSDPFXXXXXXXXX 178
P++EG FRA LQG A +EL++C+ESGD +FV AA SDPF
Sbjct: 121 PILEGDFRAVLQGNEA--NELEICLESGDPTVDQFEGSHLVFV-AAGSDPFDVITKAVKA 177
Query: 179 XKSCLKTFRIRAEKKLPGIVDYFGWCTWDAFYQDVTQEGVEAGLRSLTAGGAPPKFVIID 238
+ L+TF R KK+P ++++FGWCTWDAFY +VT + V+ GL SL AGG PKFVIID
Sbjct: 178 VEQHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVIID 237
Query: 239 DGWQSVGTDHQNPDDTGADAKDKQPLLARLTGIKENSKFQ-DG------DDPAAGIKTVV 291
DGWQSVG D + + +A + RLT IKEN KFQ DG DDP+ + V+
Sbjct: 238 DGWQSVGMDETSVEFNADNAANFA---NRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVI 294
Query: 292 RAAKEKYGLKYVYVWHAITGYWGGVRPGVAGMEGYHSNMQFPNVSPGVVENEPGMKTDVL 351
K LKYVYVWHAITGYWGGV+PGV+GME Y S + +P SPGV+ +E + +
Sbjct: 295 TDIKSNNSLKYVYVWHAITGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESI 354
Query: 352 TTQGLGLVHPRAVYRFYDELHAYLXXXXXXXXXXXXQCILETLGAGHGGRVSLTRQFHQA 411
T GLGLV+P V+ FY++LH+YL Q ILETLGAGHGGRV L +++HQA
Sbjct: 355 TKNGLGLVNPEKVFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQA 414
Query: 412 LDASIAKNFPENGIIACMSHHTDALY 437
L+ASI++NFP+NGII+CMSH+TD LY
Sbjct: 415 LEASISRNFPDNGIISCMSHNTDGLY 440
>AT5G40390.1 | chr5:16161720-16165085 FORWARD LENGTH=784
Length = 783
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 239/453 (52%), Gaps = 26/453 (5%)
Query: 4 TSSVKVAGGELSVHGRTVLSGVPEAVRXXXXXXXGPVDGV--------FLGGDF-AEPAS 54
T ++ L +G+ VL+ VP V DGV F+G + EP S
Sbjct: 19 TEKFRLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFIGFNLDGEPKS 78
Query: 55 RHVVSLGAMRGVRFMACFRFKLWWMAQRMGEKGGDVPHETQFLLVESKAGVDGGGGDAS- 113
HV S+G ++ +RFM+ FRFK+WW +G G D+ +ETQ ++++ G G +
Sbjct: 79 HHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGSDSGPGSGSGR 138
Query: 114 -YLVFLPLVEGAFRASLQGGGAGGDELQLCVESGDAGTRAASFDRALFVGAADSDPFXXX 172
Y++ LPL+EG+FR+S Q G D++ +CVESG + F + ++V A D DPF
Sbjct: 139 PYVLLLPLLEGSFRSSFQSGE--DDDVAVCVESGSTEVTGSEFRQIVYVHAGD-DPFKLV 195
Query: 173 XXXXXXXKSCLKTFRIRAEKKLPGIVDYFGWCTWDAFYQDVTQEGVEAGLRSLTAGGAPP 232
+ + TF++ EK PGIVD FGWCTWDAFY V +GV G++ L GG PP
Sbjct: 196 KDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCLVDGGCPP 255
Query: 233 KFVIIDDGWQSVGTDHQNPDDTGAD---AKDKQPLLARLTGIKENSKFQD----GDDPAA 285
V+IDDGWQS+G D D G + A ++ P RL +EN KF+D D
Sbjct: 256 GLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMP--CRLLKFEENHKFKDYVSPKDQNDV 313
Query: 286 GIKTVVRAAKEKYG-LKYVYVWHAITGYWGGVRPGVAGMEGYHSNMQFPNVSPGVVENEP 344
G+K VR K+++ + Y+YVWHA+ GYWGG+RP + S + P +SPG+
Sbjct: 314 GMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEAPALPP--STIIRPELSPGLKLTME 371
Query: 345 GMKTDVLTTQGLGLVHPRAVYRFYDELHAYLXXXXXXXXXXXXQCILETLGAGHGGRVSL 404
+ D + G+G P FY+ LH++L ILE L +GGRV L
Sbjct: 372 DLAVDKIIETGIGFASPDLAKEFYEGLHSHLQNAGIDGVKVDVIHILEMLCQKYGGRVDL 431
Query: 405 TRQFHQALDASIAKNFPENGIIACMSHHTDALY 437
+ + +AL +S+ K+F NG+IA M H D ++
Sbjct: 432 AKAYFKALTSSVNKHFNGNGVIASMEHCNDFMF 464
>AT4G01970.1 | chr4:854073-856953 REVERSE LENGTH=877
Length = 876
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 130/242 (53%), Gaps = 17/242 (7%)
Query: 42 GVFLGGDFAEPASRHVVSLGAMRGVRFMACFRFKLWWMAQRMGEKGGDVPHETQFLLVES 101
G FLG P+ R SLG F++ FRFK+WW +G+ G D+ ETQ+++++
Sbjct: 86 GGFLGFTKESPSDRLTNSLGRFEDREFLSLFRFKMWWSTAWIGKSGSDLQAETQWVMLKI 145
Query: 102 KAGVDGGGGDASYLVFLPLVEGAFRASLQGGGAGGDELQLCVESGDAGTRAASFDRALFV 161
+D SY+ +P +EGAFRASL G G + +C ESG + +SF ++
Sbjct: 146 PE-ID------SYVAIIPTIEGAFRASLTPGEKGN--VLICAESGSTKVKESSFKSIAYI 196
Query: 162 GAADSDPFXXXXXXXXXXKSCLKTFRIRAEKKLPGIVDYFGWCTWDAFYQDVTQEGVEAG 221
D +P+ + + TF++ EKKLP IVD FGWCTWDA Y V + G
Sbjct: 197 HICD-NPYNLMKEAFSALRVHMNTFKLLEEKKLPKIVDKFGWCTWDACYLTVDPATIWTG 255
Query: 222 LRSLTAGGAPPKFVIIDDGWQSVGTDHQNPDDTGADAKDK----QPLLARLTGIKENSKF 277
++ GG PKFVIIDDGWQS+ D D+ DA++ + + ARLT KE KF
Sbjct: 256 VKEFEDGGVCPKFVIIDDGWQSINFDG---DELDKDAENLVLGGEQMTARLTSFKECKKF 312
Query: 278 QD 279
++
Sbjct: 313 RN 314
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 252 DDTGADAKDK---QPLLARLTGIKENSKFQDGDDPAAGIKTVVRAAKEKY-GLKYVYVWH 307
D T D K K + L A +++ D +G+ + + ++ L +YVWH
Sbjct: 361 DLTELDEKIKILSEELNAMFDEVEKEESLGSDDVSGSGMAAFTKDLRLRFKSLDDIYVWH 420
Query: 308 AITGYWGGVRPGVAGMEGYHSNMQFPNVSPGVVENEPGMKTDVLTTQGLGLVHPRAVYRF 367
A+ G W GVRP M + + +SP + + D + G+GLVHP + F
Sbjct: 421 ALCGAWNGVRPET--MMDLKAKVAPFELSPSLGATMADLAVDKVVEAGIGLVHPSKAHEF 478
Query: 368 YDELHAYLXXXXXXXXXXXXQCILETLGAGHGGRVSLTRQFHQALDASIAKNFPENGIIA 427
YD +H+YL LE+L HGGRV L + ++ L S+ KNF +IA
Sbjct: 479 YDSMHSYLASVGVTGAKIDVFQTLESLAEEHGGRVELAKAYYDGLTESMIKNFNGTDVIA 538
Query: 428 CMSHHTDALYWYTIYIN 444
M + + T I+
Sbjct: 539 SMQQCNEFFFLATKQIS 555
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.138 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,697,534
Number of extensions: 417641
Number of successful extensions: 798
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 772
Number of HSP's successfully gapped: 6
Length of query: 451
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 349
Effective length of database: 8,310,137
Effective search space: 2900237813
Effective search space used: 2900237813
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)