BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0171900 Os06g0171900|AK100886
(457 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56190.2 | chr5:22742654-22744909 FORWARD LENGTH=448 553 e-158
AT1G55680.1 | chr1:20804988-20807294 REVERSE LENGTH=446 549 e-156
AT3G13340.1 | chr3:4332370-4334603 FORWARD LENGTH=448 543 e-155
AT1G78070.1 | chr1:29355219-29358368 FORWARD LENGTH=450 486 e-138
AT1G36070.1 | chr1:13467164-13470386 REVERSE LENGTH=419 456 e-128
AT3G49660.1 | chr3:18413690-18415223 FORWARD LENGTH=318 60 2e-09
AT5G16750.1 | chr5:5504541-5509266 REVERSE LENGTH=877 53 3e-07
AT5G23430.1 | chr5:7894073-7899862 REVERSE LENGTH=838 53 3e-07
AT5G08390.1 | chr5:2701448-2706910 FORWARD LENGTH=840 52 5e-07
AT5G52820.1 | chr5:21401423-21404203 FORWARD LENGTH=474 52 1e-06
AT5G25150.1 | chr5:8677117-8682058 FORWARD LENGTH=670 51 1e-06
AT2G41500.1 | chr2:17304319-17306855 REVERSE LENGTH=555 49 5e-06
>AT5G56190.2 | chr5:22742654-22744909 FORWARD LENGTH=448
Length = 447
Score = 553 bits (1425), Expect = e-158, Method: Compositional matrix adjust.
Identities = 256/403 (63%), Positives = 315/403 (78%)
Query: 55 EYALLTRITDTSAAEARAGKDIQGIPWERLQITRSDYRKARLVQYKNYENFPQSGELMDK 114
++ L + DTSAA+AR GKDIQGIPW+ L +TR DYRK RL QYKNYEN P SG+ K
Sbjct: 45 DFDQLNKAADTSAAQARNGKDIQGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAK 104
Query: 115 ICKQVDKISKYYEFHYNTRLVKPSILHFQLRNLLWATSKHDVYFMSNSTVGHWSSLSHNL 174
C +K S +YEF N+R V+ +ILHFQLRNL+WATSKHDVY +SN ++ HWSSL+
Sbjct: 105 KCMNTEKGSSFYEFRRNSRSVRSTILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCR 164
Query: 175 SEVLDFSGHVAPAQKHPGSLLEGFSGVQVSTLSVNEGLLVAGGFQGELICKVVGDRDVKF 234
SE+L+ GHVAP++KHP SLLEGF+ QVSTL+V E LLVAGGFQGELICK + V F
Sbjct: 165 SEILNVKGHVAPSEKHPESLLEGFTETQVSTLAVKERLLVAGGFQGELICKHLDRPGVSF 224
Query: 235 CTRTTLSDNAITNAIDIHRSASGSLRVTVSNNDCGVREFDMETFQLLNHFSYNWPVNHTS 294
C+RTT ++NAITNA+DI+R++SG+L SNNDCGVR+FDME ++L+ F Y WPVNH+S
Sbjct: 225 CSRTTYTENAITNAVDIYRNSSGALHFMASNNDCGVRDFDMERYKLVQLFRYLWPVNHSS 284
Query: 295 VSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCR 354
+SPD KL+AVVGDD D LLVD+ NG+ TL GHLDYSFASAWHP+G TFATGNQDKTCR
Sbjct: 285 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Query: 355 VWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFF 414
+WD R LS S++VL+GN+GA+R IR++SDG+++ +EPADFVH+Y + YKK QEIDFF
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFF 404
Query: 415 GEISGISLSPDDESLFVGVCDRVYASLLHYRMVHSFGYLDSFM 457
GEISGIS SPD ESLF+GV DR Y SLL Y + YLDS +
Sbjct: 405 GEISGISFSPDTESLFIGVWDRTYGSLLEYGRTRDYTYLDSLL 447
>AT1G55680.1 | chr1:20804988-20807294 REVERSE LENGTH=446
Length = 445
Score = 549 bits (1414), Expect = e-156, Method: Compositional matrix adjust.
Identities = 256/397 (64%), Positives = 309/397 (77%)
Query: 61 RITDTSAAEARAGKDIQGIPWERLQITRSDYRKARLVQYKNYENFPQSGELMDKICKQVD 120
+I DTSA +AR GKDIQGIPW+RL ITR YR+ RL QYKNYEN P SGE K C
Sbjct: 49 KIADTSADQARKGKDIQGIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQ 108
Query: 121 KISKYYEFHYNTRLVKPSILHFQLRNLLWATSKHDVYFMSNSTVGHWSSLSHNLSEVLDF 180
K + +Y+F NTR +K SILHFQLRNL+WATSKHDVY MS V H+S+L+ +VL+
Sbjct: 109 KGALFYDFWRNTRSIKSSILHFQLRNLVWATSKHDVYLMSQYLVSHYSTLTSGKHDVLNV 168
Query: 181 SGHVAPAQKHPGSLLEGFSGVQVSTLSVNEGLLVAGGFQGELICKVVGDRDVKFCTRTTL 240
GHV+P++KHPGSLLEGF+ QVSTL+V + LVAGGFQGELICK + V FC+RTT
Sbjct: 169 QGHVSPSEKHPGSLLEGFTKTQVSTLAVRDKFLVAGGFQGELICKHLDRPGVSFCSRTTY 228
Query: 241 SDNAITNAIDIHRSASGSLRVTVSNNDCGVREFDMETFQLLNHFSYNWPVNHTSVSPDRK 300
DNAITNAI+I+ SG+L T SNNDCGVR+FDME +QL+N F + WPVNHTS+SPD K
Sbjct: 229 DDNAITNAIEIYNKPSGALHFTASNNDCGVRDFDMERYQLVNQFRFPWPVNHTSLSPDGK 288
Query: 301 LLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVRN 360
LL +VGD+ ++LLVD GK +TL GHLD+SFASAWHPDG TF+TGNQDKTCRVWD+RN
Sbjct: 289 LLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRN 348
Query: 361 LSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISGI 420
LS S++VLRGN+GAIR IRY+SDG++M +EPADFVHVY + Y+ QEIDFFGEISGI
Sbjct: 349 LSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGI 408
Query: 421 SLSPDDESLFVGVCDRVYASLLHYRMVHSFGYLDSFM 457
S SPD E+LF+GV DR Y SL+ Y H++ YLDSF+
Sbjct: 409 SFSPDTEALFIGVWDRTYGSLIEYSRRHNYSYLDSFL 445
>AT3G13340.1 | chr3:4332370-4334603 FORWARD LENGTH=448
Length = 447
Score = 543 bits (1399), Expect = e-155, Method: Compositional matrix adjust.
Identities = 251/397 (63%), Positives = 308/397 (77%)
Query: 61 RITDTSAAEARAGKDIQGIPWERLQITRSDYRKARLVQYKNYENFPQSGELMDKICKQVD 120
++ DT+A +AR GKDIQGIPW+RL I+R YR+ RL QYKNYEN P SGE +K+CK
Sbjct: 51 KVADTTAEQARKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQ 110
Query: 121 KISKYYEFHYNTRLVKPSILHFQLRNLLWATSKHDVYFMSNSTVGHWSSLSHNLSEVLDF 180
K +Y+F N+R +K +ILHFQLRNL+WATSKHDVY MSN V H+SSL+ EVL+
Sbjct: 111 KGGLFYDFWRNSRSIKSTILHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNV 170
Query: 181 SGHVAPAQKHPGSLLEGFSGVQVSTLSVNEGLLVAGGFQGELICKVVGDRDVKFCTRTTL 240
GHVAP++KHPGSLLEGF+ QVSTL+V + LVAGGFQGELICK + V FC+R T
Sbjct: 171 RGHVAPSEKHPGSLLEGFTQTQVSTLAVKDDFLVAGGFQGELICKHLDRPGVSFCSRMTY 230
Query: 241 SDNAITNAIDIHRSASGSLRVTVSNNDCGVREFDMETFQLLNHFSYNWPVNHTSVSPDRK 300
DNAITNAI+I+ SG+L T SNNDCGVR+FDME +QL+ HF + WPVNH S+SPD K
Sbjct: 231 DDNAITNAIEIYNKPSGALHFTASNNDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGK 290
Query: 301 LLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVRN 360
LLA+VGD+ + L+VD GK TL GHLD+SFASAWHPDG TF+TGNQDKTCRVWD+RN
Sbjct: 291 LLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRN 350
Query: 361 LSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISGI 420
LS S++VL+GN+GAIR IRY+SDG++M +EPADFVHVY + Y+ QEIDFFGEISGI
Sbjct: 351 LSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGI 410
Query: 421 SLSPDDESLFVGVCDRVYASLLHYRMVHSFGYLDSFM 457
S SPD E+LF+GV DR Y SLL + ++ YLDS++
Sbjct: 411 SFSPDTEALFIGVWDRTYGSLLEFGRRRNYSYLDSYL 447
>AT1G78070.1 | chr1:29355219-29358368 FORWARD LENGTH=450
Length = 449
Score = 486 bits (1252), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/394 (57%), Positives = 293/394 (74%)
Query: 64 DTSAAEARAGKDIQGIPWERLQITRSDYRKARLVQYKNYENFPQSGELMDKICKQVDKIS 123
+TSA EAR GKDIQGIPWE L TR YR+ RL+ YKN+E+ +S E +DK C QV+K
Sbjct: 56 ETSALEARNGKDIQGIPWESLNYTRDRYRENRLLHYKNFESLFRSREELDKECLQVEKGK 115
Query: 124 KYYEFHYNTRLVKPSILHFQLRNLLWATSKHDVYFMSNSTVGHWSSLSHNLSEVLDFSGH 183
+Y+F +NTRLVK +I HFQLRNL+WATSKHDVYFM+N ++ HWSSL EVL+ +
Sbjct: 116 NFYDFQFNTRLVKSTIAHFQLRNLVWATSKHDVYFMNNYSLMHWSSLLQRGKEVLNVAKP 175
Query: 184 VAPAQKHPGSLLEGFSGVQVSTLSVNEGLLVAGGFQGELICKVVGDRDVKFCTRTTLSDN 243
+ P+ K GSL + S VQ+ST++V + L+VAGGFQGELICK + + +V FCT+ T +DN
Sbjct: 176 IVPSMKQHGSLSQSVSRVQISTMAVKDDLIVAGGFQGELICKKINEPEVAFCTKLTSADN 235
Query: 244 AITNAIDIHRSASGSLRVTVSNNDCGVREFDMETFQLLNHFSYNWPVNHTSVSPDRKLLA 303
ITN++DI+ + SGSLRV +NNDC VR FD F LLN F+++W VN+ S SPD KL+A
Sbjct: 236 DITNSVDIYNAPSGSLRVMTANNDCTVRLFDATNFALLNRFAFHWSVNNISTSPDGKLVA 295
Query: 304 VVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVRNLST 363
V+GD + LL D+ +GKV L GHLDYSF+SAWHP+G+ ATGNQD TCR+WDVRNLS
Sbjct: 296 VLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQ 355
Query: 364 SLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISGISLS 423
SL VL+GN+GAIR +R++SDG+F+ +EPADFVH++ A Y + QEID FGEI+GIS S
Sbjct: 356 SLKVLKGNMGAIRALRFTSDGRFLAMAEPADFVHLFDTEAGYSQCQEIDLFGEIAGISFS 415
Query: 424 PDDESLFVGVCDRVYASLLHYRMVHSFGYLDSFM 457
PD E+LFVGV DR Y SLL + + Y+DS
Sbjct: 416 PDTEALFVGVADRTYGSLLEFNRKRNHSYVDSIF 449
>AT1G36070.1 | chr1:13467164-13470386 REVERSE LENGTH=419
Length = 418
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/397 (54%), Positives = 282/397 (71%), Gaps = 3/397 (0%)
Query: 63 TDTSAAEARAGKDIQGIPWERLQITRSDYRKARLVQYKNYENF--PQSGELMDKICKQV- 119
TDTSA EAR GKDIQGI WE + R ++R+ RL QY N+ N P S E +DK QV
Sbjct: 21 TDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFVNILRPSSREKLDKEHGQVV 80
Query: 120 DKISKYYEFHYNTRLVKPSILHFQLRNLLWATSKHDVYFMSNSTVGHWSSLSHNLSEVLD 179
+K +Y+F +NTRLV +I+HFQLRNL+WATSKHDVY M N ++ HWSSL EVL+
Sbjct: 81 EKGKNFYDFQFNTRLVTSTIVHFQLRNLVWATSKHDVYLMQNYSLMHWSSLLQRGKEVLN 140
Query: 180 FSGHVAPAQKHPGSLLEGFSGVQVSTLSVNEGLLVAGGFQGELICKVVGDRDVKFCTRTT 239
+ V P QK PG E S VQVS+++V E L++ GGF GEL+CK V V FCTR +
Sbjct: 141 VARSVTPTQKLPGLFSEPLSRVQVSSMAVKENLILLGGFDGELLCKCVNQPGVAFCTRLS 200
Query: 240 LSDNAITNAIDIHRSASGSLRVTVSNNDCGVREFDMETFQLLNHFSYNWPVNHTSVSPDR 299
DNAITN +DI+R SGSLR+ +NNDC +R FD ++F ++ F+ +W VN+TSVSPD
Sbjct: 201 TEDNAITNTVDIYRDPSGSLRLITANNDCKIRVFDAQSFTRVSEFALDWSVNNTSVSPDG 260
Query: 300 KLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVR 359
KLLAVVGD + L+ DS +GKV S+L GH DYSFASAWHP+G ATGNQD CR+WD+R
Sbjct: 261 KLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIR 320
Query: 360 NLSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISG 419
N S S +VL+GN+GAIR ++++ +G+F+ +EPADFVH++ + + + QEID FGEI+G
Sbjct: 321 NPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAG 380
Query: 420 ISLSPDDESLFVGVCDRVYASLLHYRMVHSFGYLDSF 456
IS SPD E+L+VGV DR Y SLL Y+ Y+DSF
Sbjct: 381 ISFSPDTEALYVGVADRTYGSLLEYKRRKDNHYMDSF 417
>AT3G49660.1 | chr3:18413690-18415223 FORWARD LENGTH=318
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 290 VNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQ 349
++ + S D + + DD+ L D G + TL+GH +Y+F ++P +G+
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 350 DKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQ 409
D+T R+WDV L VL + + + ++ DG ++ S ++ + + +
Sbjct: 134 DETVRIWDVTT-GKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 410 EIDFFG-EISGISLSPDDESLFVGVCD 435
ID +S + SP+ + + VG D
Sbjct: 193 LIDDENPPVSFVRFSPNGKFILVGTLD 219
>AT5G16750.1 | chr5:5504541-5509266 REVERSE LENGTH=877
Length = 876
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 270 VREFDMETFQLLNHFS-YNWPVNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGH 328
+R +D+ET + + + + PV + LLA G DR L+ D G T GH
Sbjct: 84 IRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGH 143
Query: 329 LDYSFASAWHPDG--RTFATGNQDKTCRVWDVRNLSTS---LSVLRGNIGAIRCIRYSSD 383
+ +HPD +G+ D T RVWD+ +T L+++ + A+ I S D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Query: 384 GQFMLFSEPADFV------HVYSAAA 403
G LFS D V H YS A
Sbjct: 204 G-LTLFSAGRDKVVNLWDLHDYSCKA 228
>AT5G23430.1 | chr5:7894073-7899862 REVERSE LENGTH=838
Length = 837
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 313 LVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNI 372
L D K+ TL GH + +HP G FA+G+ D ++WD+R + +G+
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC-IHTYKGHT 143
Query: 373 GAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISGISLSPDDESLFVG 432
+ +R++ DG++++ + V V+ A + G+I + P + L G
Sbjct: 144 RGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Query: 433 VCDRV--YASLLHYRMVHSFG 451
DR + L + ++ S G
Sbjct: 204 SADRTVKFWDLETFELIGSGG 224
>AT5G08390.1 | chr5:2701448-2706910 FORWARD LENGTH=840
Length = 839
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 313 LVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNI 372
L D KV TL GH + +HP G FA+G+ D ++WD+R + +G+
Sbjct: 85 LWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK-KGCIHTYKGHT 143
Query: 373 GAIRCIRYSSDGQFMLFSEPADFVHVYSAAADYKKRQEIDFFGEISGISLSPDDESLFVG 432
+ +R++ DG++++ + V V+ A + G+I + P + L G
Sbjct: 144 RGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATG 203
Query: 433 VCDRV--YASLLHYRMVHSFG 451
D+ + L + ++ S G
Sbjct: 204 SADKTVKFWDLETFELIGSGG 224
>AT5G52820.1 | chr5:21401423-21404203 FORWARD LENGTH=474
Length = 473
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 290 VNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQ 349
VNH SPD K +A D+ L + G+ + GH+ + +W D R +G++
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 350 DKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQ 385
D T ++W++R L G+ + + +S DG+
Sbjct: 423 DSTLKIWEIRTKKLKQD-LPGHADEVFAVDWSPDGE 457
>AT5G25150.1 | chr5:8677117-8682058 FORWARD LENGTH=670
Length = 669
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 280 LLNHFSYNWPVNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHP 339
L+ + +N+PV SP A DR A + + + GHL WHP
Sbjct: 453 LVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHP 512
Query: 340 DGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFM 387
+ ATG+ DKT R+WDV+ + + G+ + + S DG++M
Sbjct: 513 NCNYIATGSSDKTVRLWDVQT-GECVRIFIGHRSMVLSLAMSPDGRYM 559
>AT2G41500.1 | chr2:17304319-17306855 REVERSE LENGTH=555
Length = 554
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 271 REFDMET-FQLLNHFSYNWPVNHTSVSPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHL 329
R +D+ T +LL ++ V + D L A G D A + D R G+ GH+
Sbjct: 364 RLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI 423
Query: 330 DYSFASAWHPDGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLF 389
F+ + P+G A+G +D CR+WD+R + SL ++ + + ++Y + L
Sbjct: 424 KPVFSVNFSPNGYHLASGGEDNQCRIWDLR-MRKSLYIIPAHANLVSQVKYEPQEGYFLA 482
Query: 390 SEPADF-VHVYS 400
+ D V+++S
Sbjct: 483 TASYDMKVNIWS 494
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 296 SPDRKLLAVVGDDRDALLVDSRNGKVTSTLVGHLDYSFASAWHPDGRTFATGNQDKTCRV 355
SP LA DR A L + +G + T GHLD A+HP G+ T + DKT R+
Sbjct: 307 SPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRL 365
Query: 356 WDVRNLSTSLSVLRGNIGAIRCIRYSSDGQF 386
WD+ N L + G+ ++ I + DG
Sbjct: 366 WDI-NTGAELLLQEGHSRSVYGIAFQQDGAL 395
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,593,736
Number of extensions: 392847
Number of successful extensions: 1448
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 1454
Number of HSP's successfully gapped: 21
Length of query: 457
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 355
Effective length of database: 8,310,137
Effective search space: 2950098635
Effective search space used: 2950098635
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)