BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0165800 Os06g0165800|AK065744
(260 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G34050.1 | chr4:16310844-16311973 FORWARD LENGTH=260 426 e-120
AT4G26220.1 | chr4:13284179-13285146 FORWARD LENGTH=233 283 5e-77
AT1G67980.1 | chr1:25487724-25488934 FORWARD LENGTH=233 254 4e-68
AT1G67990.1 | chr1:25489494-25490749 FORWARD LENGTH=234 237 4e-63
AT1G24735.2 | chr1:8757977-8759448 FORWARD LENGTH=292 217 6e-57
AT3G61990.1 | chr3:22957318-22958910 REVERSE LENGTH=291 156 1e-38
AT3G62000.2 | chr3:22959223-22961180 REVERSE LENGTH=353 138 4e-33
>AT4G34050.1 | chr4:16310844-16311973 FORWARD LENGTH=260
Length = 259
Score = 426 bits (1095), Expect = e-120, Method: Compositional matrix adjust.
Identities = 195/236 (82%), Positives = 219/236 (92%)
Query: 24 QKTRHSEVGHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQF 83
Q RH EVGHKSLL+SDDLYQYILETSVYPRE E MKELREVTA HPWN+MTTSADEGQF
Sbjct: 23 QNLRHQEVGHKSLLQSDDLYQYILETSVYPREPESMKELREVTAKHPWNIMTTSADEGQF 82
Query: 84 LNLLLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVA 143
LN+L+KL+ AK TMEIGVYTGYSLLATALA+P+DG ILAMD+NRENYELGLP IEKAGVA
Sbjct: 83 LNMLIKLVNAKNTMEIGVYTGYSLLATALALPEDGKILAMDVNRENYELGLPIIEKAGVA 142
Query: 144 HKIDFREGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDN 203
HKIDFREGPALPVLD++V +E NHG++DF+FVDADKDNY+NYH+RL+ LVK+GG++GYDN
Sbjct: 143 HKIDFREGPALPVLDEIVADEKNHGTYDFIFVDADKDNYINYHKRLIDLVKIGGVIGYDN 202
Query: 204 TLWNGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
TLWNGSVV P DAPMRKY+RYYRDFVLELNKALAAD R+EIC LPVGDGIT+CRR+
Sbjct: 203 TLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITICRRI 258
>AT4G26220.1 | chr4:13284179-13285146 FORWARD LENGTH=233
Length = 232
Score = 283 bits (725), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 175/226 (77%), Gaps = 1/226 (0%)
Query: 34 KSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQFLNLLLKLIGA 93
K LLKS++LY+YILETSVYPRE E ++ELR +T NHP M T+ D GQ + +LL L+ A
Sbjct: 7 KGLLKSEELYKYILETSVYPREPEVLRELRNITHNHPQAGMATAPDAGQLMGMLLNLVNA 66
Query: 94 KKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFREGPA 153
+KT+E+GV+TGYSLL TAL +P+DG ++A+D+NR++YE+GLP I+KAGV HKIDF+E A
Sbjct: 67 RKTIEVGVFTGYSLLLTALTLPEDGKVIAIDMNRDSYEIGLPVIKKAGVEHKIDFKESEA 126
Query: 154 LPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVVLP 213
LP LD+L+ + N G FDF FVDADK NY NYHERL++L+KVGG++ YDNTLW GSV P
Sbjct: 127 LPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYDNTLWGGSVAEP 186
Query: 214 ADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
D+ ++ + LELNK L+AD RV+I Q +GDGIT+CRR+
Sbjct: 187 -DSSTPEWRIEVKKATLELNKKLSADQRVQISQAALGDGITICRRL 231
>AT1G67980.1 | chr1:25487724-25488934 FORWARD LENGTH=233
Length = 232
Score = 254 bits (648), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 169/233 (72%), Gaps = 6/233 (2%)
Query: 29 SEVGHKSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNL--MTTSADEGQFLNL 86
+E+ K +LKS+ L QYI+ETS YPREHE +KELR+ T NL M DEG FL++
Sbjct: 3 NEIPTKGILKSEALKQYIMETSAYPREHELLKELRKATVQKYGNLSEMEVPVDEGHFLSM 62
Query: 87 LLKLIGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKI 146
L+K++ AK T+EIGV+TGYSLL TALA+P+DG I A+DI++E YE+GL I+KAGV HKI
Sbjct: 63 LVKIMNAKNTIEIGVFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKI 122
Query: 147 DFREGPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLW 206
+F L LDQLV ++ FDF F DADK +Y+N+HERL+KLVKVGG++ +DNTLW
Sbjct: 123 NFIHSDGLKALDQLVNDK---CEFDFAFADADKSSYVNFHERLLKLVKVGGIIAFDNTLW 179
Query: 207 NGSVVLPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
G V D + +++R YR ++E NK LA D RVE+ Q+ +GDGITLCRR+
Sbjct: 180 FGFVAEDEDG-VPEHMREYRAALIEFNKKLALDPRVEVSQISIGDGITLCRRL 231
>AT1G67990.1 | chr1:25489494-25490749 FORWARD LENGTH=234
Length = 233
Score = 237 bits (605), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/228 (52%), Positives = 163/228 (71%), Gaps = 5/228 (2%)
Query: 34 KSLLKSDDLYQYILETSVYPREHECMKELREVTANHPWNL--MTTSADEGQFLNLLLKLI 91
K +LKS+ L QYI+ET+ YPREHE +KELRE T NL M DE FL++L+K+I
Sbjct: 8 KGILKSEALKQYIMETTAYPREHELLKELREATIQRYGNLSEMGVPVDESLFLSMLVKII 67
Query: 92 GAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFREG 151
AK T+EIGV+TGYSL ALA+P+DG I A+DI++ Y LGL ++KAGV HKI+F +
Sbjct: 68 NAKNTIEIGVFTGYSLFTVALALPEDGRITAIDIDQAGYNLGLEFMKKAGVDHKINFIQS 127
Query: 152 PALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVV 211
A+ LDQL+ G +DF FVDADK NY+ + E+L+KLVKVGG++ +DNTLW G+++
Sbjct: 128 DAVRGLDQLL--NGEKQEYDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFDNTLWFGTLI 185
Query: 212 LPADAPMRKYIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
+ + ++R YR+ +LE NK LA D RVEI Q+ +GDG+TLCRR+
Sbjct: 186 -QKENEVPGHMRAYREALLEFNKILARDPRVEIAQISIGDGLTLCRRL 232
>AT1G24735.2 | chr1:8757977-8759448 FORWARD LENGTH=292
Length = 291
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 158/277 (57%), Gaps = 55/277 (19%)
Query: 36 LLKSDDLYQYILETSVYPREHECMKELREVTANHPWNL---------------------- 73
+LKSD L +YI ET+ YPREHE +K+LRE T NL
Sbjct: 16 ILKSDALKKYIFETTAYPREHEQLKKLREATVLKYGNLYTVLLYDHTLILSNNNCKYHNV 75
Query: 74 -------------------------------MTTSADEGQFLNLLLKLIGAKKTMEIGVY 102
M DEG FL++LLK++ AKKT+E+GV+
Sbjct: 76 TTLDPTKYVYHQFKDYTSNEKMVCACMRRSEMEVPVDEGHFLSMLLKIMNAKKTIELGVF 135
Query: 103 TGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFREGPALPVLDQLVE 162
TGYSLL TALA+P DG + +DI++E YE+GL I+ AGV HKI+F L LD ++
Sbjct: 136 TGYSLLTTALALPHDGHVTGIDIDKEAYEMGLEFIKNAGVHHKINFIHSDCLQALDNMLS 195
Query: 163 EEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVVLPADAPMRKYI 222
E FDF FVDADK NY N HERLMKLVKVGG++ +DNTLW+G V + + ++
Sbjct: 196 ENPK-PEFDFAFVDADKPNYANMHERLMKLVKVGGVIAFDNTLWSG-FVAEKEENVPVHM 253
Query: 223 RYYRDFVLELNKALAADHRVEICQLPVGDGITLCRRV 259
R R L+LNK LAAD VE+ Q+ +GDG+TLCRR+
Sbjct: 254 RVNRKAFLDLNKRLAADPHVEVSQVSIGDGVTLCRRL 290
>AT3G61990.1 | chr3:22957318-22958910 REVERSE LENGTH=291
Length = 290
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 132/218 (60%), Gaps = 15/218 (6%)
Query: 42 LYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQFLNLLLKLIGAKKTMEIGV 101
LY Y+L REHE +K+LRE TA + + S D+ Q L +L++++GAK+ +E+GV
Sbjct: 86 LYDYVLNN---VREHEILKQLREETA---ISQIQVSPDQAQLLAMLVEILGAKRCIEVGV 139
Query: 102 YTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFREGPALPVLDQLV 161
YTGYS LA AL +P+ G ++A D + E+ E AGV+HK+ + G A L ++
Sbjct: 140 YTGYSSLAVALVLPESGRLVACDKDANALEVAKRYYELAGVSHKVTVKHGLAAESLMSMI 199
Query: 162 EEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSVVLPADAPMR-K 220
+ G S+DF F+DADK Y Y E L++LV+VGG++ DN LW+G V AD+ + +
Sbjct: 200 -QNGEESSYDFAFLDADKAMYQEYFESLLRLVRVGGVIVIDNVLWHGWV---ADSTVNDE 255
Query: 221 YIRYYRDFVLELNKALAADHRVEICQLPVGDGITLCRR 258
R+F NK L D RV I + +GDG+T+CR+
Sbjct: 256 RTISLRNF----NKKLMDDQRVSISMVSIGDGMTICRK 289
>AT3G62000.2 | chr3:22959223-22961180 REVERSE LENGTH=353
Length = 352
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 15/216 (6%)
Query: 32 GHKSLLK-SDDLYQYILETSVYPREHECMKELREVTANHPWNLMTTSADEGQFLNLLLKL 90
G+K ++ + LY Y+L RE + +++LRE T+ + M S D+ Q L +L+++
Sbjct: 60 GNKQVISLTPRLYDYVLSNV---REPKILRQLREETSKMRGSQMQVSPDQAQLLAMLVQM 116
Query: 91 IGAKKTMEIGVYTGYSLLATALAIPDDGTILAMDINRENYELGLPSIEKAGVAHKIDFRE 150
+ A++ +E+GVYTGYS LA AL +P+ G ++A + + + E+ E AGV+HK++ ++
Sbjct: 117 LAAERCIEVGVYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKQ 176
Query: 151 GPALPVLDQLVEEEGNHGSFDFVFVDADKDNYLNYHERLMKLVKVGGLVGYDNTLWNGSV 210
G A L ++ + G S+DF FVDADK Y +Y E L++LV+VGG++ DN LW+G V
Sbjct: 177 GLAAESLKSMI-QNGEGASYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDNVLWHGRV 235
Query: 211 VLPA--DAPMRKYIRYYRDFVLELNKALAADHRVEI 244
P DA K I R+F NK L D RV I
Sbjct: 236 SDPMVNDA---KTIS-IRNF----NKKLMDDKRVSI 263
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,527,413
Number of extensions: 235602
Number of successful extensions: 495
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 482
Number of HSP's successfully gapped: 8
Length of query: 260
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 163
Effective length of database: 8,447,217
Effective search space: 1376896371
Effective search space used: 1376896371
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)