BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0142900 Os06g0142900|AK121920
(562 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G11380.1 | chr5:3630172-3633250 FORWARD LENGTH=701 738 0.0
AT4G15560.1 | chr4:8884218-8887254 FORWARD LENGTH=718 650 0.0
AT3G21500.2 | chr3:7573907-7576594 REVERSE LENGTH=642 595 e-170
AT5G50850.1 | chr5:20689671-20692976 FORWARD LENGTH=364 57 4e-08
>AT5G11380.1 | chr5:3630172-3633250 FORWARD LENGTH=701
Length = 700
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/554 (63%), Positives = 431/554 (77%), Gaps = 21/554 (3%)
Query: 9 NTGHSVVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSR 68
N + +EL +A+HYVF AP+D ILWDA + TYAHK+LT R S + +Q G+SG TSR
Sbjct: 119 NPSFAAIELTLALHYVFRAPVDNILWDAVEQTYAHKVLTRRWSAIPS-RQNSGISGVTSR 177
Query: 69 FESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFL 128
ESEYD FG GHGCNS+SAGLG+AVARD+ G+++R+V VI N T AGQ YEAM +AG+L
Sbjct: 178 LESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYL 237
Query: 129 DSNMVVILNDSRHTLLPKADSQSKMSINALSSALSKVQSSKGFRKFREAAKGLSKWFGKG 188
DSNM+VILNDSRH+L P + SK SI+ALSS +SK+QSSK FRKFRE AK ++K GKG
Sbjct: 238 DSNMIVILNDSRHSLHPNMEEGSKASISALSSIMSKIQSSKVFRKFRELAKAMTKRIGKG 297
Query: 189 MHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVL 248
M+E+AAK+DEYARGM+GP G+TLFEELGLYYIGP+DG+NI+DL+CVL+EVS+LDS GPVL
Sbjct: 298 MYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVL 357
Query: 249 VHVITENEKDSGGEFNSEITPDEEGPPDSSQDILKFLENGLSRTYNDCFVESLIAEAEND 308
VHVITE +D+ + +K + RTY+DCFVE+L+ EAE D
Sbjct: 358 VHVITEGNRDA--------------------ETVKNIMVKDRRTYSDCFVEALVMEAEKD 397
Query: 309 KHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFL 368
+ IVVVH GM +D S+ FQ RFPDRFF++G+AEQHAVTFSAGL+ GGLKPFCIIPS FL
Sbjct: 398 RDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFL 457
Query: 369 QRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDE 428
QRAYDQ+V DVD Q+ VRF ITSAGLVGS+GP G FDI FMS LPNMI M+P++EDE
Sbjct: 458 QRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAMAPADEDE 517
Query: 429 LIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGNPLEIGKGEILAEGKEIAFLGYGDV 488
L++MVATAA V DRP+CFR+P+G+IV + + G P+EIG+G +L EG+++A LGYG +
Sbjct: 518 LVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVPTGLPIEIGRGRVLVEGQDVALLGYGAM 577
Query: 489 VQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTVGGFGSHVS 548
VQ CL A SLL G+ TVA+ARFCKPLDI L+R LCQ H FLITVEEG VGGFGSHV+
Sbjct: 578 VQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLITVEEGCVGGFGSHVA 637
Query: 549 QFISLDGLLDGKIK 562
QFI+LDG LDG IK
Sbjct: 638 QFIALDGQLDGNIK 651
>AT4G15560.1 | chr4:8884218-8887254 FORWARD LENGTH=718
Length = 717
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/562 (57%), Positives = 404/562 (71%), Gaps = 25/562 (4%)
Query: 14 VVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEY 73
VVEL +A+HY+FN P DKILWD G +Y HKILTGRR T++Q GLSGFT R ESE+
Sbjct: 122 VVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGESEH 181
Query: 74 DPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNMV 133
D FG GH ++SAGLGMAV RDL G+ N +V VI + AGQ YEAM +AG+LDS+M+
Sbjct: 182 DCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMI 241
Query: 134 VILNDSRHTLLPKA--DSQSKMSINALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHE 191
VILND++ LP A D S + ALSSALS++QS+ R+ RE AKG++K G MH+
Sbjct: 242 VILNDNKQVSLPTATLDGPSP-PVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMHQ 300
Query: 192 FAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHV 251
AAK+DEYARGMI G++LFEELGLYYIGP+DG+NIDDL+ +LKEV + +TGPVL+HV
Sbjct: 301 LAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHV 360
Query: 252 ITENEKDSGGEFNSEITPDEEGPPDSSQDILKF--------LENGLSRTYNDCFVESLIA 303
+TE + P E D ++KF +++Y F E+L+A
Sbjct: 361 VTEKGRG---------YPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVA 411
Query: 304 EAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCII 363
EAE DK +V +H MG + LFQ RFP R FD+GIAEQHAVTF+AGLAC GLKPFC I
Sbjct: 412 EAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAI 471
Query: 364 PSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSP 423
S+F+QRAYDQ+V DVD+QK+PVRFA+ AGLVG++GPT+ G FD+TFM+CLPNMIVM+P
Sbjct: 472 YSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAP 531
Query: 424 SNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGN---PLEIGKGEILAEGKEI 480
S+E +L +MVATA ++DRP CFRYP+G +G + L GN P+EIGKG IL EG+ +
Sbjct: 532 SDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVA--LPPGNKGVPIEIGKGRILKEGERV 589
Query: 481 AFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTV 540
A LGYG VQ CL A +L G+ TVA+ARFCKPLD LIR L + H+ LITVEEG++
Sbjct: 590 ALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSI 649
Query: 541 GGFGSHVSQFISLDGLLDGKIK 562
GGFGSHV QF++LDGLLDGK+K
Sbjct: 650 GGFGSHVVQFLALDGLLDGKLK 671
>AT3G21500.2 | chr3:7573907-7576594 REVERSE LENGTH=642
Length = 641
Score = 595 bits (1534), Expect = e-170, Method: Compositional matrix adjust.
Identities = 305/561 (54%), Positives = 384/561 (68%), Gaps = 55/561 (9%)
Query: 14 VVELAIAIHYVFNAPMDKILWDAGQHTYAHKILTGRRSLFHTIKQRKGLSGFTSRFESEY 73
VVEL +A+HY+FN P DKILWD G +Y HKILTGRR TI+Q GLSG+T R ESE+
Sbjct: 112 VVELTVALHYIFNTPHDKILWDVGHQSYPHKILTGRRGKMKTIRQTNGLSGYTKRRESEH 171
Query: 74 DPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDSNMV 133
D FG GH +LSAGLGMAV RDL G N +V+VI + AGQ YEAM +AG+L SNM+
Sbjct: 172 DSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMI 231
Query: 134 VILNDSRHTLLPKAD-SQSKMSINALSSALSKVQSSKGFRKFREAAKGLSKWFGKGMHEF 192
VILND++ LP A+ + ALS ALS++QS+
Sbjct: 232 VILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC----------------------- 268
Query: 193 AAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDLICVLKEVSTLDSTGPVLVHVI 252
GMI +TLFEELG +Y+GP+DG+NIDDL+ +L+ + + + GPVL+HV+
Sbjct: 269 ---------GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 319
Query: 253 TENEKDSGGEFNSEITPDEEGPPDSSQDILKF-LENG-----LSRT--YNDCFVESLIAE 304
TE + P E D +LKF E G +S+T Y CFVE+LIAE
Sbjct: 320 TEKGRG---------YPYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAE 370
Query: 305 AENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIP 364
AE DK IV +H MG + LF+SRFP R FD+GIAEQHAVTF+AGLAC GLKPFC I
Sbjct: 371 AEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIY 430
Query: 365 STFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPS 424
S+F+QRAYDQ+V DVD+QK+PVRFAI AGL+G++GPT+ G FD+TFM+CLPNMIVM+PS
Sbjct: 431 SSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPS 490
Query: 425 NEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYGN---PLEIGKGEILAEGKEIA 481
+E EL +MVATAA ++DRP CFRY +G +G S L GN PL+IG+G IL +G+ +A
Sbjct: 491 DEAELFNMVATAAAIDDRPSCFRYHRGNGIGVS--LPPGNKGVPLQIGRGRILRDGERVA 548
Query: 482 FLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEGTVG 541
LGYG VQRCL A S+L G++ TVA+ARFCKPLD+ LIR L + H+ LITVEEG++G
Sbjct: 549 LLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEVLITVEEGSIG 608
Query: 542 GFGSHVSQFISLDGLLDGKIK 562
GFGSHV QF++LDGLLDGK+K
Sbjct: 609 GFGSHVVQFLALDGLLDGKLK 629
>AT5G50850.1 | chr5:20689671-20692976 FORWARD LENGTH=364
Length = 363
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 94/235 (40%), Gaps = 34/235 (14%)
Query: 326 LFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFC-IIPSTFLQRAYDQIVEDVDMQK- 383
L + P+R +D I E G A GLKP + F +A D I+
Sbjct: 76 LLEKYGPERVYDTPITEAGFTGIGVGAAYAGLKPVVEFMTFNFSMQAIDHIINSAAKSNY 135
Query: 384 -------IPVRFAITSAGLVGSEGPTNSGPFDITFMSCLPNMIVMSPSNEDELIDMVATA 436
+P+ F + G G +S + + S +P + V++P + ++ ++ A
Sbjct: 136 MSAGQINVPIVFRGPNGAAAGV-GAQHSQCYAAWYAS-VPGLKVLAPYSAEDARGLL-KA 192
Query: 437 AMVEDRPICFRYPKGAIVGTSGTLAYGNP-------------LEIGKGEILAEGKEIAFL 483
A+ + P+ F L YG L IGK +I EGK++ +
Sbjct: 193 AIRDPDPVVF---------LENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIV 243
Query: 484 GYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDIDLIRMLCQQHDFLITVEEG 538
+ +V L A L GI A V N R +PLD I ++ L+TVEEG
Sbjct: 244 TFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEG 298
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,349,901
Number of extensions: 532544
Number of successful extensions: 1202
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1193
Number of HSP's successfully gapped: 4
Length of query: 562
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 458
Effective length of database: 8,255,305
Effective search space: 3780929690
Effective search space used: 3780929690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)