BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0139800 Os06g0139800|AK058604
(293 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258 312 2e-85
AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261 304 4e-83
AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257 255 2e-68
AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256 245 2e-65
AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252 199 2e-51
AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273 185 2e-47
AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272 184 4e-47
AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271 177 6e-45
AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266 170 9e-43
AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284 72 3e-13
>AT5G51260.1 | chr5:20832222-20833466 REVERSE LENGTH=258
Length = 257
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 166/213 (77%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C +WR A E NNLAPWK++P ECA YV++Y+ G Y +DLE V+ EA +AR+ DG
Sbjct: 45 CTTWRFAAEMNNLAPWKTIPVECADYVKDYVMGKGYLTDLERVSEEALIFARSIEFSGDG 104
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
+D W+FD+DETLLSNLPYY DHG+GLELFDH EFDKWVERG APAI SLKLY V DLG
Sbjct: 105 KDIWIFDIDETLLSNLPYYIDHGFGLELFDHSEFDKWVERGVAPAIAPSLKLYQRVLDLG 164
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
+K FLLTGR E H VTV+NL GF +WDKLILR+P ++ K AT+YKSEKR EM +EGY
Sbjct: 165 YKVFLLTGRKESHRLVTVENLINAGFQNWDKLILRSPEEQHKMATLYKSEKRDEMVKEGY 224
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
RI GNSGDQWSDLLG S S RSFKL NPMYYIP
Sbjct: 225 RIRGNSGDQWSDLLGTSMSQRSFKLANPMYYIP 257
>AT4G25150.1 | chr4:12901736-12902882 REVERSE LENGTH=261
Length = 260
Score = 304 bits (779), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 165/213 (77%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C SWR A E NNLAPWK++P ECA YV++YL G Y D+E V+ EA YA + DG
Sbjct: 48 CTSWRFAAETNNLAPWKTIPAECADYVKDYLMGEGYVVDVERVSEEAKVYASSFESNGDG 107
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
+D W+FD+DETLLSNLPYY +HG GLE+FDH +FD WVE+G APAI SLKLY +V LG
Sbjct: 108 KDIWIFDIDETLLSNLPYYMEHGCGLEVFDHSKFDMWVEKGIAPAIAPSLKLYQKVIHLG 167
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
+K LLTGR E H +TV+NL+ GFH+WDKLILR+ DR KTAT+YKSEKR+EM +EGY
Sbjct: 168 YKVILLTGRRENHRVITVENLRNAGFHNWDKLILRSLDDRNKTATMYKSEKREEMVKEGY 227
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
RI GNSGDQWSDLLG + S RSFKLPNPMYYIP
Sbjct: 228 RIRGNSGDQWSDLLGSAMSERSFKLPNPMYYIP 260
>AT4G29270.1 | chr4:14423797-14424848 REVERSE LENGTH=257
Length = 256
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 154/212 (72%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C SWRLA E NN+ PWK +P +C Y++ Y+ G + D +VVA A YA+T +VG DG
Sbjct: 44 CESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAKTVKVGGDG 103
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
+DAWVFD+DETLLSN+ YY +GYG E +D ++++ VE+G+ P +SL+LY ++ LG
Sbjct: 104 KDAWVFDIDETLLSNIEYYKANGYGSEPYDSIKYNEVVEKGKDPGYDASLRLYKALKKLG 163
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
F LLTGR EGH VT NL+ G+ W++L+LR D+ KTAT YKSE+R ++ +EGY
Sbjct: 164 FTIILLTGRDEGHRSVTEKNLRDAGYFGWNRLLLRGQNDQGKTATQYKSEQRSQVVKEGY 223
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
I GN+GDQWSDLLGF+ ++RSFK+PNPMYY+
Sbjct: 224 TIHGNTGDQWSDLLGFAVASRSFKVPNPMYYV 255
>AT4G29260.1 | chr4:14422310-14423409 REVERSE LENGTH=256
Length = 255
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 147/213 (69%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C SWRLA E NN+ W +P C V EYL G + SD V+ A A+A++ + DG
Sbjct: 43 CDSWRLAAETNNVGTWDLIPSICVDSVAEYLNGDQFLSDYSVIVDYALAFAKSVEISGDG 102
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
+D W+FD+DETLL+N+ YY HGYG E +D +F +WVE+G APA +SL+LYN ++ LG
Sbjct: 103 KDVWIFDIDETLLTNIDYYKAHGYGSEPYDDNKFSEWVEQGTAPAFDASLRLYNALKKLG 162
Query: 201 FKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEGY 260
F LLTGR E T NL+ G+ W++L+LR P D+ K+AT YKSE+R ++ EEG+
Sbjct: 163 FTIILLTGRDEHQRTSTETNLRDAGYSGWERLLLRGPNDQGKSATNYKSEQRSKLIEEGF 222
Query: 261 RILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
+I GNSGDQWSDL GF+ + RSFK+PNPMYYIP
Sbjct: 223 KIRGNSGDQWSDLQGFAVADRSFKVPNPMYYIP 255
>AT2G38600.1 | chr2:16145907-16146857 FORWARD LENGTH=252
Length = 251
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 134/214 (62%), Gaps = 1/214 (0%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C SWRLA E NN+ W+ +P +C YV Y+ Y D+++ + Y + DG
Sbjct: 38 CLSWRLAVETNNVRAWRIVPLQCLRYVEVYMLAGQYDRDVQLTVDQIKVYLNEIILPGDG 97
Query: 141 RDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDLG 200
DAW+ DVD+T SN+ YY YG + +D F W +GE+PAI L+L+ ++ + G
Sbjct: 98 MDAWILDVDDTCFSNVFYYRLKRYGCDPYDPTGFRTWAMKGESPAIQPVLELFYKLIETG 157
Query: 201 FKTFLLTGR-SEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEG 259
FK FL+TGR E T++NL QGF +++LI+R +++++AT YK+ RKEM EEG
Sbjct: 158 FKVFLVTGRDEETLRQATLENLHNQGFTGYERLIMRTADNKRQSATTYKTRIRKEMMEEG 217
Query: 260 YRILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
YRI GN GDQWSDL G + R+FK+PNPMY++P
Sbjct: 218 YRIWGNVGDQWSDLQGEYSGDRTFKIPNPMYFVP 251
>AT5G44020.1 | chr5:17712433-17714046 FORWARD LENGTH=273
Length = 272
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 134/216 (62%), Gaps = 4/216 (1%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAY-ARTA--RVG 137
C SWR+ E NN+ +K +P+EC +V++Y+T Y D+E EA Y +T +
Sbjct: 56 CESWRVNVELNNIRDFKVVPQECVWFVQKYMTSSQYEDDVERAVDEAILYLGKTCCEKKT 115
Query: 138 DDGRDAWVFDVDETLLSNLPYYADHG-YGLELFDHREFDKWVERGEAPAIPSSLKLYNEV 196
DG DAW+FD+D+TLLS +PY+ +G +G E + +F++W G+APA+P +KLY+E+
Sbjct: 116 CDGMDAWIFDIDDTLLSTIPYHKSNGCFGGEQLNTTKFEEWQNSGKAPAVPHMVKLYHEI 175
Query: 197 RDLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEME 256
R+ GFK FL++ R E TV+NL + G+H W L+LR D KK+ + YK++ R +
Sbjct: 176 RERGFKIFLISSRKEYLRSATVENLIEAGYHSWSNLLLRGEDDEKKSVSQYKADLRTWLT 235
Query: 257 EEGYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
GYR+ G G QW+ G R+FKLPN +YY+
Sbjct: 236 SLGYRVWGVMGAQWNSFSGCPVPKRTFKLPNSIYYV 271
>AT1G04040.1 | chr1:1042564-1043819 REVERSE LENGTH=272
Length = 271
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 135/218 (61%), Gaps = 8/218 (3%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDL-----EVVAREASAYARTAR 135
C SWR+ E +N+ + +P+EC +++++Y+T Y+ D+ EV+ S ++
Sbjct: 55 CESWRINVEVHNIRKFDVVPQECVSHIKDYMTSSQYKDDVARTVDEVILHFGSMCCSKSK 114
Query: 136 VGDDGRDAWVFDVDETLLSNLPYYADHGY-GLELFDHREFDKWVERGEAPAIPSSLKLYN 194
DG DAW+FD+D+TLLS +PY+ +G+ G E + +F+ W+++ +APA+P KLY+
Sbjct: 115 C--DGMDAWIFDIDDTLLSTIPYHKKNGFFGGEKLNSTKFEDWIQKKKAPAVPHMKKLYH 172
Query: 195 EVRDLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKE 254
++R+ G K FL++ R E TVDNL + G++ W L+LR D++K YKSEKRK
Sbjct: 173 DIRERGIKIFLISSRKEYLRSATVDNLIQAGYYGWSNLMLRGLEDQQKEVKQYKSEKRKW 232
Query: 255 MEEEGYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYI 292
+ GYR+ G GDQWS G R+FKLPN +YY+
Sbjct: 233 LMSLGYRVWGVMGDQWSSFAGCPLPRRTFKLPNSIYYV 270
>AT5G24780.1 | chr5:8507783-8508889 REVERSE LENGTH=271
Length = 270
Score = 177 bits (449), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 133/216 (61%), Gaps = 4/216 (1%)
Query: 80 RCASWRLAGEANNLAPWKSLPEECAAYVREYL-TGVAYRSDLEVVAREASAYARTARVGD 138
C SW L E +N+ + ++P C AYV +YL T Y+ D + V +EA YA+ + +
Sbjct: 56 NCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKN 115
Query: 139 DGRDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEA-PAIPSSLKLYNEVR 197
D + W+FD+D+TLLS++PYYA +GYG E + W+E GE+ P +P +L LY +
Sbjct: 116 DTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLL 175
Query: 198 DLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEE 257
+LG + +++ R + VTV+NLK G W LIL+ P K T +YKS+ R + +
Sbjct: 176 ELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILK-PNGSKLTQVVYKSKVRNSLVK 234
Query: 258 EGYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
+GY I+GN GDQW+DL+ T R FKLPNP+YY+P
Sbjct: 235 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYVP 269
>AT5G24770.1 | chr5:8500713-8501844 REVERSE LENGTH=266
Length = 265
Score = 170 bits (430), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 130/216 (60%), Gaps = 4/216 (1%)
Query: 80 RCASWRLAGEANNLAPWKSLPEECAAYVREYL-TGVAYRSDLEVVAREASAYARTARVGD 138
C SW L E +N+ + ++P C YV +YL T Y+ D + V +EA YA+ + +
Sbjct: 51 NCRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKN 110
Query: 139 DGRDAWVFDVDETLLSNLPYYADHGYGLELFDHREFDKWVERGEA-PAIPSSLKLYNEVR 197
D + W+FD+D+TLLS++PYYA +GYG E D + W+ G + P +P +L LY +
Sbjct: 111 DTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNII 170
Query: 198 DLGFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEE 257
+LG + +L+ R + VT+DNL+ G W LIL+ P +YKS+ RK + +
Sbjct: 171 ELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILK-PNGSNLRQVVYKSKVRKSLVK 229
Query: 258 EGYRILGNSGDQWSDLLGFSTSARSFKLPNPMYYIP 293
+GY I+GN GDQW+DL+ T R FKLPNP+YY+P
Sbjct: 230 KGYNIVGNIGDQWADLVE-DTPGRVFKLPNPLYYVP 264
>AT2G39920.1 | chr2:16663201-16664305 REVERSE LENGTH=284
Length = 283
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 29/213 (13%)
Query: 81 CASWRLAGEANNLAPWKSLPEECAAYVREYLTGVAYRSDLEVVAREASAYARTARVGDDG 140
C L + N+L LP C + Y +L + A Y +T + +D
Sbjct: 88 CKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPMNDN 147
Query: 141 RDAWVFDVDET-LLSNLPYYADHGYGLELFDHREFDKWVERGEAPAIPSSLKLYNEVRDL 199
D V D+D+T LL YY K++E + L LY+++R
Sbjct: 148 CDVVVIDIDDTNLLEQDSYYM---------------KYIEEAKHQKSILILALYSKLRSQ 192
Query: 200 GFKTFLLTGRSEGHHGVTVDNLKKQGFHDWDKLILRAPADRKKTATIYKSEKRKEMEEEG 259
G+ LL+ R E T++ LK +G+ DW LI+ R+ T ++KE E G
Sbjct: 193 GYSMVLLSRRPETERNATIEQLKSRGYSDWSHLIM----SREDT-------RQKEELERG 241
Query: 260 YRILGNSGDQWSDLLGFST--SARSFKLPNPMY 290
+R++G G+ L G S R FKLP+ Y
Sbjct: 242 HRVIGVIGNHMDVLRGQWNWQSKRLFKLPSLTY 274
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,649,523
Number of extensions: 228925
Number of successful extensions: 534
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 519
Number of HSP's successfully gapped: 10
Length of query: 293
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 195
Effective length of database: 8,419,801
Effective search space: 1641861195
Effective search space used: 1641861195
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)