BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0136800 Os06g0136800|AK099815
(297 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280 345 2e-95
ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197 158 3e-39
AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299 147 6e-36
AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242 142 2e-34
AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293 132 3e-31
AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310 128 3e-30
AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290 125 3e-29
AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306 121 5e-28
AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371 99 4e-21
AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388 87 1e-17
>AT1G12410.1 | chr1:4223099-4224954 FORWARD LENGTH=280
Length = 279
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 161/266 (60%), Positives = 215/266 (80%), Gaps = 7/266 (2%)
Query: 32 KVFVGLKAQTKLGSSESSCPNVTAGFYTAVNRRISLGLSNKRATRARISMMPVGTPRVPY 91
K++ GLK Q+ S N+ FY V + + G +A+R+R+ MMP+GTPRVPY
Sbjct: 21 KLYSGLKPQSA-SFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMMPIGTPRVPY 77
Query: 92 RTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGP 151
R EGTWQW+DIWNALYRER+IFIG +IDEEFSNQ+LA+MLYLD++D++++I +Y+NGP
Sbjct: 78 RNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGP 137
Query: 152 GGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAG 211
GGDLTP +A+YDTM SLKSP+GTHC+G A+NLAGF+LAAGEKG R MPL RI+LQSPAG
Sbjct: 138 GGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAG 197
Query: 212 AARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIID 271
AARGQADDI+NEA EL RI++YL+++L+++TG P +++ +DLSRVKRF+AE A+EYG+ID
Sbjct: 198 AARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLID 257
Query: 272 RIIRPSRIKKEGSTAQKKDLRNLGLG 297
+I+RP RIK++ A ++D + GLG
Sbjct: 258 KIVRPPRIKED---APRQD-ESAGLG 279
>ATCG00670.1 | chrC:69910-71882 REVERSE LENGTH=197
Length = 196
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Query: 82 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNT 141
MP+G P+VP+R+PGEG W+DI+N LYRER+ F+G +D E SNQ+++ M+YL +T
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 142 KKILLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPL 201
K + L+IN PGG + MA+YDTM ++ + T C+G A ++A FIL G R P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 202 CRISLQSPAGA-ARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFD 260
R+ + PA + Q + EA EL++++ + + TG P+ I ED+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180
Query: 261 AEGALEYGIIDRI 273
A A +GI+D +
Sbjct: 181 ATEAQAHGIVDLV 193
>AT1G02560.1 | chr1:538000-539805 FORWARD LENGTH=299
Length = 298
Score = 147 bits (371), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 119/194 (61%), Gaps = 5/194 (2%)
Query: 86 TPRVPYRTPGEG-----TWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDN 140
+P P G+G ++ I + L++ RII G ++D++ +N ++A +LYLD+VD
Sbjct: 92 SPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDP 151
Query: 141 TKKILLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMP 200
TK I++Y+N PGG +T MA++DTM ++ + T C+G A ++ F+L+AG KG R +P
Sbjct: 152 TKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLP 211
Query: 201 LCRISLQSPAGAARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFD 260
RI + P G A+G DI+ +ANE++ K L L+ HTG ++KI++D R
Sbjct: 212 NSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMS 271
Query: 261 AEGALEYGIIDRII 274
A+ A EYG+ID +I
Sbjct: 272 AKEAKEYGLIDGVI 285
>AT5G23140.1 | chr5:7783811-7784826 FORWARD LENGTH=242
Length = 241
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 103 DIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMALY 162
DI++ L +ERII I I+++ S+ V+A +LYL+S + +K I +Y+N PGG +T +A+Y
Sbjct: 48 DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107
Query: 163 DTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQADDIEN 222
DTM ++SPI T CLG A ++A +LAAG KG R +P + + P+G GQA DI
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167
Query: 223 EANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDRII--RPSRIK 280
+++R+ + L +HTG P+D + ++ R E A +GIID +I RP +
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELV 227
Query: 281 KEGSTAQKKD 290
K+ + KD
Sbjct: 228 KDAVGNESKD 237
>AT5G45390.1 | chr5:18396351-18397586 FORWARD LENGTH=293
Length = 292
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 104/172 (60%)
Query: 103 DIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMALY 162
D+ L RERI+F+G SID+ ++ +++ +L LD+ D K I L+IN PGG L+ MA+Y
Sbjct: 79 DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIY 138
Query: 163 DTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQADDIEN 222
D + +++ + T LG A + A IL AG KG R MP RI + P G A GQA D+E
Sbjct: 139 DVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEI 198
Query: 223 EANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDRII 274
+A E++ KN + S ++ T +++ +D+ R + A+EYG+ID +I
Sbjct: 199 QAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250
>AT1G66670.1 | chr1:24863995-24865646 REVERSE LENGTH=310
Length = 309
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 90 PYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYIN 149
P R P +++ LD N L R+RI+F+G +D+ ++ V++ +L LD+ D+ + I L+IN
Sbjct: 75 PSRLP---SFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFIN 131
Query: 150 GPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSP 209
PGG +T M +YD M K+ + T CLG A ++ F+LA+G KG R MP ++ + P
Sbjct: 132 SPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQP 191
Query: 210 AGAARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGI 269
G A G+A ++ E++ K L S TG P +I D R + A EYG+
Sbjct: 192 LGTAGGKATEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGL 251
Query: 270 IDRII 274
ID +I
Sbjct: 252 IDAVI 256
>AT1G11750.2 | chr1:3967609-3969535 FORWARD LENGTH=290
Length = 289
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%)
Query: 102 LDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPGGDLTPCMAL 161
LD+ + L+R RIIFIG I+ + + +V++ ++ L S+D+ IL+Y+N PGG +A+
Sbjct: 113 LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 172
Query: 162 YDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQADDIE 221
YD M +K +GT G A + +LA GEKG R MP R+ + P G +D+
Sbjct: 173 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVR 232
Query: 222 NEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDRII 274
+ NE I + + + TG P++K+ + R + A ALE+G+ID ++
Sbjct: 233 RQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLIDGLL 285
>AT4G17040.1 | chr4:9586740-9589297 REVERSE LENGTH=306
Length = 305
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 14/220 (6%)
Query: 67 LGLSNKRATRARISMMPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSN 126
L S+ + R ++M+ +P+ D+ + L++ RI+++G S+ +
Sbjct: 75 LNFSSSKPKRGVVTMV------IPFSKGSAHEQPPPDLASYLFKNRIVYLGMSLVPSVTE 128
Query: 127 QVLASMLYLDSVDNTKKILLYINGPG--------GDLTPCMALYDTMLSLKSPIGTHCLG 178
+LA LYL D K I LYIN G G T A+YD M +K PI T C+G
Sbjct: 129 LILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKPPIFTLCVG 188
Query: 179 FAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQADDIENEANELIRIKNYLYSKL 238
A+ A +L AG KG+R+ +P I ++ P +GQA D+E E+ IK +
Sbjct: 189 NAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQGQATDVEIARKEIKHIKTEMVKLY 248
Query: 239 SEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDRIIRPSR 278
S+H G ++I D+ R K F A+EYGIID+++ R
Sbjct: 249 SKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNER 288
>AT1G09130.3 | chr1:2939731-2942217 REVERSE LENGTH=371
Length = 370
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 11/183 (6%)
Query: 103 DIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPG---------G 153
D+ + L RI++IG + + V+A ++YL +D + I +YIN G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 154 DLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAA 213
+ A+YD+++ LK+ + T C+G A A +L+AG KG R MP + +Q P +
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240
Query: 214 RG--QADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIID 271
G A D+ A E+I ++ L LS+HTG+ V+ + + R DA A E+G+ID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 272 RII 274
RI+
Sbjct: 301 RIL 303
>AT1G49970.1 | chr1:18501936-18504462 REVERSE LENGTH=388
Length = 387
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 103 DIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYINGPG---------G 153
D+ + L RI ++G I + ++A ++LD + TK I LYIN PG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 154 DLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSP-AGA 212
T A+ DT+ KS + T G AF A +L+ G+KG R P L P
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 213 ARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGIIDR 272
+ G A D+ +A EL Y L++ TG ++I+ED+ R K A+ A++YGI D+
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADK 350
Query: 273 IIRPSRIKKEGSTAQKKD 290
I + S+ +K+D
Sbjct: 351 I-----ADSQDSSFEKRD 363
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,982,466
Number of extensions: 244930
Number of successful extensions: 562
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 556
Number of HSP's successfully gapped: 10
Length of query: 297
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 199
Effective length of database: 8,419,801
Effective search space: 1675540399
Effective search space used: 1675540399
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)