BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0135900 Os06g0135900|AK100230
(522 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02010.1 | chr1:348046-352197 FORWARD LENGTH=674 693 0.0
AT1G12360.1 | chr1:4201172-4206144 FORWARD LENGTH=667 681 0.0
AT4G12120.1 | chr4:7256687-7260914 REVERSE LENGTH=663 595 e-170
AT1G77140.1 | chr1:28984163-28987681 FORWARD LENGTH=570 114 1e-25
AT2G17980.1 | chr2:7824352-7826404 FORWARD LENGTH=628 98 1e-20
>AT1G02010.1 | chr1:348046-352197 FORWARD LENGTH=674
Length = 673
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/508 (65%), Positives = 410/508 (80%), Gaps = 10/508 (1%)
Query: 14 DPKIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLV 73
D K FR I RDR+L ++L K ++K+ WK+LIMD+ TV++M+ +CKMA+ITD GISLV
Sbjct: 17 DYKFFRQISRDRLLHEMLGSTKTGDSKA-WKILIMDRVTVKVMSQSCKMADITDQGISLV 75
Query: 74 EDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIK 133
E+LFKRREPMP MDAIYF+QP KEN++M LSDMSGR PLYRKA+IFFSS IPKELV++IK
Sbjct: 76 EELFKRREPMPGMDAIYFIQPSKENIVMFLSDMSGREPLYRKAFIFFSSTIPKELVNHIK 135
Query: 134 NDSSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSA-QHNSKKFNDTISTMATRI 192
+DSSV+PRIGALREMN+E+F ID QGF TDH+ A LY+ NS+ F+ ++ MATRI
Sbjct: 136 SDSSVLPRIGALREMNMEYFPIDNQGFLTDHEQALETLYAEDAENSRHFHICLNIMATRI 195
Query: 193 ATTFASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETC 252
AT FASLKE P VRYRA K +T D+VP LA A+WD +SKYK+ IP FPQ ETC
Sbjct: 196 ATVFASLKELPFVRYRAAK-----STASRDLVPSKLAAAIWDCISKYKA-IPNFPQTETC 249
Query: 253 ELLIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEV-SKAGSEPERKEALLEDHDP 311
ELLIVDR +DQIAP+IHEWTYDAMCHDLL+M+G K++ EV SK G PE+KE +LEDHDP
Sbjct: 250 ELLIVDRSVDQIAPIIHEWTYDAMCHDLLDMEGNKHVIEVPSKTGGPPEKKEIVLEDHDP 309
Query: 312 LWVELRHIHIADASERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKIVQALPQYGEQV 371
+W+ELRH HIADASERL++KM NF SKNKAAQ+ SRDG E+ST+DLQKIVQALPQYGEQV
Sbjct: 310 VWLELRHTHIADASERLHEKMTNFASKNKAAQMRSRDGSELSTRDLQKIVQALPQYGEQV 369
Query: 372 EKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRL 431
+KL+ H+E+AGKIN+ IR+ GLRD+GQ+EQDLVFGDA AK+VI+ LR+ QD +PENKLRL
Sbjct: 370 DKLSTHVELAGKINRIIRDTGLRDLGQLEQDLVFGDAGAKDVINFLRTNQDTNPENKLRL 429
Query: 432 LIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSLKFDA 491
L+IYA VYPEKFEGDKG KLMQLA+L +M I++++ + GS KA + G FSLKFDA
Sbjct: 430 LMIYATVYPEKFEGDKGVKLMQLARLSPVDMKVISNMQLIAGSPENKA-KSGSFSLKFDA 488
Query: 492 QKKKNAARTERQDGDETWALSRFFPLIE 519
K K A R +R +ETW L RF+P+IE
Sbjct: 489 GKTKQANRKDRSGEEETWQLFRFYPMIE 516
>AT1G12360.1 | chr1:4201172-4206144 FORWARD LENGTH=667
Length = 666
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/507 (63%), Positives = 406/507 (80%), Gaps = 4/507 (0%)
Query: 16 KIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVED 75
K FR I R+R+L ++L+ K +KS+WKVLIMDK TV+IM+YACKMA+IT G+SLVED
Sbjct: 16 KNFRQITRERLLYEMLRSAKTGSSKSTWKVLIMDKLTVKIMSYACKMADITQEGVSLVED 75
Query: 76 LFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKND 135
+F+RR+P+PSMDAIYF+QP KENVIM LSDMSG+ PLY+KA++FFSSP+ KELV +IK D
Sbjct: 76 IFRRRQPLPSMDAIYFIQPTKENVIMFLSDMSGKSPLYKKAFVFFSSPVSKELVGHIKKD 135
Query: 136 SSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATT 195
SSV+PRIGALREMNLEFFAID QGF TDH+ A DL+ + S+K + ++ MA+RIAT
Sbjct: 136 SSVLPRIGALREMNLEFFAIDSQGFITDHERALEDLFGDEETSRKGDACLNVMASRIATV 195
Query: 196 FASLKEFPCVRYRAPKGTDPMT-TPKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETCEL 254
FASL+EFP VRYRA K D T T D++P LA +W+ ++K+K +I FPQ ETCEL
Sbjct: 196 FASLREFPAVRYRAAKSLDASTMTTLRDLIPTKLAAGIWNCLAKHKQSIENFPQTETCEL 255
Query: 255 LIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEV-SKAGSEPERKEALLEDHDPLW 313
LI+DR IDQIAPVIHEWTYDAMCHDLL M+G KY++ + SK+G +PE+K+ LLE+HDP+W
Sbjct: 256 LILDRSIDQIAPVIHEWTYDAMCHDLLNMEGNKYVHVIPSKSGGQPEKKDVLLEEHDPIW 315
Query: 314 VELRHIHIADASERLYDKMNNFVSKNKAAQLHS-RDGGEISTKDLQKIVQALPQYGEQVE 372
+ELRH HIADASERL+DKM NF+SKNKAAQL RDG E+ST+DLQK+VQALPQY EQ++
Sbjct: 316 LELRHAHIADASERLHDKMTNFLSKNKAAQLQGKRDGAELSTRDLQKMVQALPQYSEQID 375
Query: 373 KLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRLL 432
KL+LH+EIA K+N IRE GLR++GQ+EQDLVFGDA K+VI L ++++ S E KLRLL
Sbjct: 376 KLSLHVEIARKLNDLIREQGLRELGQLEQDLVFGDAGMKDVIKYLSTQEEASREGKLRLL 435
Query: 433 IIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYLVGSDTKKASRPGGFSLKFDAQ 492
+I A +YPEKFEG+KG+ LM+LAKL D+M A+N++ L + K + PGGF+LKFD
Sbjct: 436 MILATIYPEKFEGEKGQNLMKLAKLSSDDMTAVNNMSLLGSAVDAKKNTPGGFTLKFDLH 495
Query: 493 KKKNAARTERQDGDETWALSRFFPLIE 519
KKK A R ERQ+ + W LSRF+P+IE
Sbjct: 496 KKKRAVRKERQE-EAAWQLSRFYPMIE 521
>AT4G12120.1 | chr4:7256687-7260914 REVERSE LENGTH=663
Length = 662
Score = 595 bits (1533), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/510 (55%), Positives = 388/510 (76%), Gaps = 7/510 (1%)
Query: 16 KIFRNICRDRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVED 75
K FR I R+R+L ++L+P+++ +K +WKVL+MDKFTV+IM+ ACKM+EIT GISLVE
Sbjct: 16 KNFRQITRERLLCEMLRPERNGSSKLTWKVLVMDKFTVKIMSSACKMSEITQEGISLVEV 75
Query: 76 LFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKND 135
+ K R+PM +M+ IYF+QP +ENV LSDM+G+ PLY+KA++FFSSP+ + LV+ IK D
Sbjct: 76 ITKHRQPMTAMEVIYFIQPTEENVTAFLSDMTGKSPLYKKAFVFFSSPVSRSLVNLIKKD 135
Query: 136 SSVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATT 195
+ RIG L+EMNLE+ ++D+QGF T+++ A +L+ N ++ + ++ +A RIAT
Sbjct: 136 MRAMKRIGGLKEMNLEYISMDIQGFVTNNENALEELFCDDENHQRADACLNVVAKRIATV 195
Query: 196 FASLKEFPCVRYRAPKGTDPMTTPKF-DMVPKWLATAVWDIVSKYKSTIPEFPQKETCEL 254
ASLKE+P VRYR K D T + +++P LA +VW+ +++YK TI +FPQ ETCEL
Sbjct: 196 LASLKEYPFVRYRGAKALDATTMTTYRELIPTKLAASVWNCLARYKQTIEDFPQTETCEL 255
Query: 255 LIVDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEV-SKAGSEPERKEALLEDHDPLW 313
LI+DR IDQIAP+IHEWTYDAMCHDLL M+G KY +EV SK G +PE+KE LL++ D +W
Sbjct: 256 LILDRSIDQIAPLIHEWTYDAMCHDLLNMEGNKYTHEVPSKTGDKPEKKEVLLDEEDSIW 315
Query: 314 VELRHIHIADASERLYDKMNNFVSKNKAAQL--HSRDGGEISTKDLQKIVQALPQYGEQV 371
VELR HIADASERL++KM NFVSKNKAAQL S+D G++S+KDLQK+V ALPQY EQ+
Sbjct: 316 VELRDAHIADASERLHEKMTNFVSKNKAAQLKHSSKDFGDLSSKDLQKMVHALPQYSEQI 375
Query: 372 EKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAAAKEVISILRSKQDMSPENKLRL 431
+KL+LH+EIA IN+ I E GLRD+GQ+EQDLVFGDA K+VI L + +S E+KLRL
Sbjct: 376 DKLSLHVEIARTINRTIMEQGLRDLGQLEQDLVFGDAGRKDVIKFLSTNHIISHESKLRL 435
Query: 432 LIIYAIVYPEKFEGDKGEKLMQLAKLPHDEMDAINSLRYL--VGSDTKKASRPGGFSLKF 489
++I A +YP+KFEG+KG K+M+LAKL D++ A+N++R L V ++ KK++ G F LKF
Sbjct: 436 IMIVAAIYPKKFEGEKGRKMMELAKLSGDDVVAVNNMRLLGPVHTECKKST-TGSFPLKF 494
Query: 490 DAQKKKNAARTERQDGDETWALSRFFPLIE 519
D K K AAR +R +TW LSRF+P++E
Sbjct: 495 DVLKTKRAARRDRVGETQTWQLSRFYPIVE 524
>AT1G77140.1 | chr1:28984163-28987681 FORWARD LENGTH=570
Length = 569
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 211/448 (47%), Gaps = 61/448 (13%)
Query: 24 DRILKDLLQPDKDKETKSSWKVLIMDKFTVRIMAYACKMAEITDAGISLVE---DLFKRR 80
+R+L+D+ S KVLI+D TV ++ +E+ + LVE + +
Sbjct: 12 NRMLQDI----------SGMKVLILDSETVSNVSIVYSQSELLQKEVFLVEMIDSISVSK 61
Query: 81 EPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKNDSSVIP 140
E M + A+YF++P +N+ L ++ P + + ++FFS+ + K+ +I DS
Sbjct: 62 ESMSHLKAVYFIRPTSDNIQKLRYQLAN--PRFGEYHLFFSNLL-KDTQIHILADSDEQE 118
Query: 141 RIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQ-----HNSKKFNDTISTMATRIATT 195
+ ++E +F + D FT + MA LY ++F+D + IA
Sbjct: 119 VVQQVQEYYADFVSGDPYHFTLN--MASNHLYMIPAVVDPSGLQRFSDRV---VDGIAAV 173
Query: 196 FASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETCELL 255
F +LK P +RY+ T K +A ++ +++S + +F + E+ LL
Sbjct: 174 FLALKRRPVIRYQRTSDT-----------AKRIAHETAKLMYQHESALFDFRRTESSPLL 222
Query: 256 IV-DRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPERKE---ALLEDHDP 311
+V DR D + P++++WTY AM H+L+ + K ++ GS P+ ++ L + D
Sbjct: 223 LVIDRRDDPVTPLLNQWTYQAMVHELIGLQDNK--VDLKSIGSLPKDQQVEVVLSSEQDA 280
Query: 312 LWVELRHIHIADAS---ERLYDKMNNFVSKNKAAQLHSRDGGEISTKDLQKIVQALPQYG 368
+ + + D +R+ D N+ Q + +D+ + V P+Y
Sbjct: 281 FFKSNMYENFGDIGMNIKRMVDDFQQVAKSNQNIQ---------TVEDMARFVDNYPEYK 331
Query: 369 EQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVF--GDAAAKEVISILRSKQDMSPE 426
+ ++ H+ + +++K + L + Q EQDL G AA E ++ L + + +S
Sbjct: 332 KMQGNVSKHVTLVTEMSKLVEARKLMTVSQTEQDLACNGGQGAAYEAVTDLLNNESVSDI 391
Query: 427 NKLRLLIIYAIVYPEKFEGDKGEKLMQL 454
++LRL+++YA+ ++E + +LMQL
Sbjct: 392 DRLRLVMLYAL----RYEKENPVQLMQL 415
>AT2G17980.1 | chr2:7824352-7826404 FORWARD LENGTH=628
Length = 627
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 192/435 (44%), Gaps = 34/435 (7%)
Query: 22 CRDRILKDLLQPDKDKETKSS--WKVLIMDKFTVRIMAYACKMAEITDAGISLVEDLFKR 79
C R+L +L QP T + +K+LI D+F I++ + ++ G++L + K
Sbjct: 12 CVIRML-NLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTHVKDLRKHGVTLFFLIDKD 70
Query: 80 REPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFFSSPIPKELVSYIKND---S 136
R+P+ + A+YF+QP + N+ +++D S LY ++ FSS IP++ + + + S
Sbjct: 71 RQPVHDVPAVYFVQPTESNLQRIIADAS--RSLYDTFHLNFSSSIPRKFLEELASGTLKS 128
Query: 137 SVIPRIGALREMNLEFFAIDMQGFTTDHDMAFTDLYSAQHNSKKFNDTISTMATRIATTF 196
+ ++ + + LEF ++ F+ + + K+ N+ I +A+ +
Sbjct: 129 GSVEKVSKVHDQYLEFVTLEDNLFSLAQQSTYVQMNDPSAGEKEINEIIERVASGLFCVL 188
Query: 197 ASLKEFPCVRYRAPKGTDPMTTPKFDMVPKWLATAVWDIVSKYKSTIPEFPQKETCELLI 256
+L P +R + G M D + + ++ ++ + F + C I
Sbjct: 189 VTLGVVPVIRCPS-GGPAEMVASLLDQKLRDHLLSKNNLFTEGGGFMSSFQRPLLC---I 244
Query: 257 VDRPIDQIAPVIHEWTYDAMCHDLLEMDGQKYIYEVSKAGSEPERKEALLEDHDPLWVEL 316
DR + + H++ Y + HD+L + + ++ G + K L+ DP W
Sbjct: 245 FDRNFELSVGIQHDFRYRPLVHDVLGLK----LNQLKVQGEKGPPKSFELDSSDPFWSAN 300
Query: 317 RHIHIADASERLYDKMNNFVSKNKAAQLHSRDG-------------GEISTKDLQKIVQA 363
+ D + + ++N + K +++ + G G I T+ L V++
Sbjct: 301 STLEFPDVAVEIETQLNKY--KRDVEEVNKKTGGGSGAEFDGTDLIGNIHTEHLMNTVKS 358
Query: 364 LPQYGEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVF-GDAAAKEVISILRSKQD 422
LP+ E+ + + H IA + I+E + + E D++ G E+++ L+ K
Sbjct: 359 LPELTERKKVIDKHTNIATALLGQIKERSIDAFTKKESDMMMRGGIDRTELMAALKGKG- 417
Query: 423 MSPENKLRLLIIYAI 437
+ +KLR I+Y I
Sbjct: 418 -TKMDKLRFAIMYLI 431
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,374,003
Number of extensions: 480923
Number of successful extensions: 1174
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1154
Number of HSP's successfully gapped: 5
Length of query: 522
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 419
Effective length of database: 8,282,721
Effective search space: 3470460099
Effective search space used: 3470460099
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)