BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0133900 Os06g0133900|AF413082
         (515 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45300.1  | chr2:18677518-18679868 FORWARD LENGTH=521          683   0.0  
AT1G48860.1  | chr1:18068892-18071331 REVERSE LENGTH=522          676   0.0  

>AT2G45300.1 | chr2:18677518-18679868 FORWARD LENGTH=521
          Length = 520

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/438 (74%), Positives = 362/438 (82%)

Query: 78  LQPIREISGAVQLPGSKSLSNRILLLSALSEGTTVVDNLLNSEDVHYMLEALKALGLSVE 137
           LQPIREISG ++LPGSKSLSNRILLL+ALSEGTTVVDNLLNS+D++YML+ALK LGL+VE
Sbjct: 83  LQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDINYMLDALKRLGLNVE 142

Query: 138 ADKVAKRAVVVGCGGKFPVEKDAKEEVQLFLGNAGTAMRPLXXXXXXXXXXXXYVLDGVP 197
            D    RAVV GCGG FP   D+K +++L+LGNAGTAMRPL            YVLDGVP
Sbjct: 143 TDSENNRAVVEGCGGIFPASIDSKSDIELYLGNAGTAMRPLTAAVTAAGGNASYVLDGVP 202

Query: 198 RMRERPIGDLVVGLKQLGADVDCFLGTECPPVRVKGIGGLPGGKVKLSGSISSQYXXXXX 257
           RMRERPIGDLVVGLKQLGADV+C LGT CPPVRV   GGLPGGKVKLSGSISSQY     
Sbjct: 203 RMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTALL 262

Query: 258 XXXXXXXGDVEIEIIDKLISIPYVEMTLRLMERFGVKAEHSDSWDRFYIKGGQKYKSPGN 317
                  GDVEIEI+DKLIS+PYVEMTL+LMERFGV  EHSDSWDRF++KGGQKYKSPGN
Sbjct: 263 MSAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSVEHSDSWDRFFVKGGQKYKSPGN 322

Query: 318 AYVEGDASSASYFLAGAAIXXXXXXXXXXXXXSLQGDVKFAEVLEMMGAKVTWTDTSVTV 377
           AYVEGDASSASYFLAGAAI             SLQGDVKFAEVLE MG KV+WT+ SVTV
Sbjct: 323 AYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVSWTENSVTV 382

Query: 378 TGPPREPYGKKHLKAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMVAI 437
           TGPPR+ +G +HL+A+DVNMNKMPDVAMTLAVVALFADGPT IRDVASWRVKETERM+AI
Sbjct: 383 TGPPRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVKETERMIAI 442

Query: 438 RTELTKLGASVEEGPDYCIITPPEKLNITAIDTYDDHRMAMAFSLAACADVPVTIRDPGC 497
            TEL KLGA+VEEG DYC+ITPP+K+    IDTYDDHRMAMAFSLAACADVP+TI DPGC
Sbjct: 443 CTELRKLGATVEEGSDYCVITPPKKVKTAEIDTYDDHRMAMAFSLAACADVPITINDPGC 502

Query: 498 TRKTFPNYFDVLSTFVRN 515
           TRKTFP+YF VL    ++
Sbjct: 503 TRKTFPDYFQVLERITKH 520



>AT1G48860.1 | chr1:18068892-18071331 REVERSE LENGTH=522
          Length = 521

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/438 (74%), Positives = 361/438 (82%)

Query: 78  LQPIREISGAVQLPGSKSLSNRILLLSALSEGTTVVDNLLNSEDVHYMLEALKALGLSVE 137
           LQPIREISG ++LPGSKSLSNRILLL+ALSEGTTVVDNLLNS+D++YML+ALK LGL+VE
Sbjct: 84  LQPIREISGLIKLPGSKSLSNRILLLAALSEGTTVVDNLLNSDDINYMLDALKILGLNVE 143

Query: 138 ADKVAKRAVVVGCGGKFPVEKDAKEEVQLFLGNAGTAMRPLXXXXXXXXXXXXYVLDGVP 197
                 RAVV GCGG FP   D+K +++L+LGNAGTAMRPL            YVLDGVP
Sbjct: 144 THSENNRAVVEGCGGVFPASIDSKSDIELYLGNAGTAMRPLTAAVTAAGGNASYVLDGVP 203

Query: 198 RMRERPIGDLVVGLKQLGADVDCFLGTECPPVRVKGIGGLPGGKVKLSGSISSQYXXXXX 257
           RMRERPIGDLVVGLKQLGADV+C LGT CPPVRV   GGLPGGKVKLSGSISSQY     
Sbjct: 204 RMRERPIGDLVVGLKQLGADVECTLGTNCPPVRVNANGGLPGGKVKLSGSISSQYLTALL 263

Query: 258 XXXXXXXGDVEIEIIDKLISIPYVEMTLRLMERFGVKAEHSDSWDRFYIKGGQKYKSPGN 317
                  GDVEIEI+DKLIS+PYVEMTL+LMERFGV AEHS+SWDRF++KGGQKYKSPGN
Sbjct: 264 MAAPLALGDVEIEIVDKLISVPYVEMTLKLMERFGVSAEHSESWDRFFVKGGQKYKSPGN 323

Query: 318 AYVEGDASSASYFLAGAAIXXXXXXXXXXXXXSLQGDVKFAEVLEMMGAKVTWTDTSVTV 377
           AYVEGDASSASYFLAGAAI             SLQGDVKFAEVLE MG KV+WT+ SVTV
Sbjct: 324 AYVEGDASSASYFLAGAAITGETVTVEGCGTTSLQGDVKFAEVLEKMGCKVSWTENSVTV 383

Query: 378 TGPPREPYGKKHLKAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMVAI 437
           TGP R+ +G +HL+A+DVNMNKMPDVAMTLAVVALFADGPT IRDVASWRVKETERM+AI
Sbjct: 384 TGPSRDAFGMRHLRAIDVNMNKMPDVAMTLAVVALFADGPTTIRDVASWRVKETERMIAI 443

Query: 438 RTELTKLGASVEEGPDYCIITPPEKLNITAIDTYDDHRMAMAFSLAACADVPVTIRDPGC 497
            TEL KLGA+VEEG DYC+ITPP+K+    IDTYDDHRMAMAFSLAACADVP+TI DPGC
Sbjct: 444 CTELRKLGATVEEGSDYCVITPPKKVKPAEIDTYDDHRMAMAFSLAACADVPITINDPGC 503

Query: 498 TRKTFPNYFDVLSTFVRN 515
           TRKTFP+YF VL    ++
Sbjct: 504 TRKTFPDYFQVLERITKH 521



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.136    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,488,866
Number of extensions: 307846
Number of successful extensions: 649
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 646
Number of HSP's successfully gapped: 2
Length of query: 515
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 412
Effective length of database: 8,282,721
Effective search space: 3412481052
Effective search space used: 3412481052
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)