BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0132100 Os06g0132100|AK072859
(454 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42090.1 | chr5:16826830-16828149 FORWARD LENGTH=440 542 e-154
AT5G18520.1 | chr5:6145027-6146349 FORWARD LENGTH=441 382 e-106
AT3G09570.1 | chr3:2940524-2941843 FORWARD LENGTH=440 365 e-101
AT5G02630.1 | chr5:591798-593084 FORWARD LENGTH=429 305 2e-83
>AT5G42090.1 | chr5:16826830-16828149 FORWARD LENGTH=440
Length = 439
Score = 542 bits (1396), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/407 (65%), Positives = 313/407 (76%), Gaps = 11/407 (2%)
Query: 28 EIRETVIRSDPRSIIPLDEFGFSHSGVLELNVSGIAFDPPASSELDLSQLGFFLSTLDAW 87
EIR++ IRSD R IIPLDEFGF+HSG LEL+ S I ++ +LDLS++GFFL T DAW
Sbjct: 24 EIRKSEIRSDDRPIIPLDEFGFTHSGRLELDASKIWL-SNSNPDLDLSKVGFFLCTRDAW 82
Query: 88 VHVLRQLQDLDVTCALQADLVKLAYSFDRLRPPSNPAGVEVARSSSFSTAFPVSEPGQYT 147
VHV++QL++ ++TCALQ+DLVK ++F+ L+ S FST F ++ QY+
Sbjct: 83 VHVIQQLEEEEITCALQSDLVKHVFTFNNLKG---------GDKSRFSTVFTENDADQYS 133
Query: 148 LVFANCLGGGLKVSMDVRSAMYNVDPPTGERSYLSAGATALPTIXXXXXXXXXXXXXXXX 207
LVFANCL +K+SMDVRSAMYN++ G R YLSAG T LP +
Sbjct: 134 LVFANCLQQ-VKISMDVRSAMYNLEGKKGGRDYLSAGRTVLPKVYFLFSVIYFSLAATWI 192
Query: 208 XXXXRKRAAVFRIHYFMXXXXXXXXXXXXXEAEDKSYIERTGTAHGWDVLFYIFSFLKGI 267
+KR VF IH+FM EAEDKSYI++TGTAHGWDVLFYIF+FLKGI
Sbjct: 193 YVLYKKRLTVFAIHFFMLGVVVLKALNLLCEAEDKSYIKKTGTAHGWDVLFYIFNFLKGI 252
Query: 268 SLFTLIVLIGTGWSFLKPYLADREKKVLMVVIPLQVVANIAQVVIDESGPYARAWVTWKQ 327
+LFTLIVLIGTGWSFLKPYL D+EKKVLM+VIPLQVVAN AQVVIDE+GPY + WVTWKQ
Sbjct: 253 TLFTLIVLIGTGWSFLKPYLQDKEKKVLMIVIPLQVVANFAQVVIDETGPYGQDWVTWKQ 312
Query: 328 VLLLVDVICCCAVLFPIVWSIKNLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTRV 387
+ LLVDV+CCCAVLFPIVWSIKNLREAA++DGKAAVNL+KLTLFRQYY+VVICYIYFTRV
Sbjct: 313 IFLLVDVVCCCAVLFPIVWSIKNLREAAKTDGKAAVNLVKLTLFRQYYIVVICYIYFTRV 372
Query: 388 VVYALMTITSYRYQWTSYVAKELATLAFYVFTGYKFRPEVHNPYFAI 434
VVYAL TITSY+Y WTS VA ELATLAFY+FTGYKFRPEVHNPYF +
Sbjct: 373 VVYALETITSYKYMWTSVVASELATLAFYLFTGYKFRPEVHNPYFVV 419
>AT5G18520.1 | chr5:6145027-6146349 FORWARD LENGTH=441
Length = 440
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/412 (47%), Positives = 266/412 (64%), Gaps = 20/412 (4%)
Query: 28 EIRETVIRSDPRSIIPLDEFGFSHSG-----VLELNVSGIAFDPPASSELDLSQLGFFLS 82
EI+ VI D R +I ++FGF+H+G + ++V + DP + S+LGFFL
Sbjct: 25 EIKSLVISDDARPMILFEKFGFTHTGHVTVSISSVSVVSTSSDPNPEA----SRLGFFLL 80
Query: 83 TLDAWVHVLRQLQDLDVTCALQADLVKLAYSFDRLRPPSNPAGVEVARSSSFSTAFPVSE 142
+ ++ + VL ++Q C L + V ++F L PP N S F+ ++PV+
Sbjct: 81 SEESLLQVLLEIQQNPRFCVLDSHYVTHLFTFRDLSPPPN---------SRFNQSYPVTS 131
Query: 143 PGQYTLVFANCLGGGLKVSMDVRSAMYNVDPPTGERSYLSAGATALPTIXXXXXXXXXXX 202
P +Y+L FANC+ KVSM VR+ MYN DP G + YL AG+T LPT+
Sbjct: 132 PNEYSLFFANCVPET-KVSMAVRTEMYNKDP-NGSKDYLPAGSTQLPTLYSFFFLCYVAF 189
Query: 203 XXXXXXXXXRKRAAVFRIHYFMXXXXXXXXXXXXXEAEDKSYIERTGTAHGWDVLFYIFS 262
+ V RIH M AEDK Y++ TGT HGWD+LFYIF
Sbjct: 190 LGFWSYTCWTNKQTVHRIHLLMAGLLLIKSLNLICAAEDKHYVKITGTPHGWDILFYIFQ 249
Query: 263 FLKGISLFTLIVLIGTGWSFLKPYLADREKKVLMVVIPLQVVANIAQVVIDESGPYARAW 322
F++ + LFT+I+LIGTGWSFLKP+L ++EK VL++VIPLQV+ANIA +VI E+GP+ + W
Sbjct: 250 FIRVVLLFTVIILIGTGWSFLKPFLQEKEKNVLIIVIPLQVLANIASIVIGETGPFIKDW 309
Query: 323 VTWKQVLLLVDVICCCAVLFPIVWSIKNLREAARSDGKAAVNLMKLTLFRQYYVVVICYI 382
VTW QV LLVD+ICCCA++FPIVWSI++LRE +++DGKAA NL KLTLFRQ+Y+VVI Y+
Sbjct: 310 VTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLSKLTLFRQFYIVVIGYL 369
Query: 383 YFTRVVVYALMTITSYRYQWTSYVAKELATLAFYVFTGYKFRPEVHNPYFAI 434
YFTR+VV+AL TI +Y+YQW S+ A+E+ +L FYV + FRPE N YFA+
Sbjct: 370 YFTRIVVFALKTIAAYKYQWVSFAAEEIVSLVFYVIMFHMFRPEEKNEYFAV 421
>AT3G09570.1 | chr3:2940524-2941843 FORWARD LENGTH=440
Length = 439
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/408 (46%), Positives = 262/408 (64%), Gaps = 12/408 (2%)
Query: 28 EIRETVIRSDPRSIIPLDEFGFSHSGVLELNVSGIAFDPPASSEL-DLSQLGFFLSTLDA 86
EI+ I D R +I ++FGF+ SG + +++S +A +S + D S+LGFFL + ++
Sbjct: 24 EIKSLTISDDSRPMILFEKFGFTQSGHVSVSISSVAVVSSSSDPIPDPSRLGFFLMSEES 83
Query: 87 WVHVLRQLQDLDVTCALQADLVKLAYSFDRLRPPSNPAGVEVARSSSFSTAFPVSEPGQY 146
+ V+ +++ C L ++ V ++F L PP S + +PV P +Y
Sbjct: 84 LLQVVLEIEQNPNFCVLDSNYVLHLFTFHDLSPPP---------GSKYEHLYPVMSPNEY 134
Query: 147 TLVFANCLGGGLKVSMDVRSAMYNVDPPTGERSYLSAGATALPTIXXXXXXXXXXXXXXX 206
+L F NC+ K+SM VR+ MYN+DP G + YL AG+T LP +
Sbjct: 135 SLFFVNCVPET-KISMKVRTEMYNLDP-NGSKDYLPAGSTRLPGLYFFFSLGYLAFLGLW 192
Query: 207 XXXXXRKRAAVFRIHYFMXXXXXXXXXXXXXEAEDKSYIERTGTAHGWDVLFYIFSFLKG 266
+ V RIH M AEDK Y++ TGT HGWDVLFYIF F++
Sbjct: 193 GYACWVNKRVVHRIHVLMAALLLMKALNLICAAEDKHYVKVTGTPHGWDVLFYIFQFIRV 252
Query: 267 ISLFTLIVLIGTGWSFLKPYLADREKKVLMVVIPLQVVANIAQVVIDESGPYARAWVTWK 326
+ LFT+IVLIGTGWSFLKP+L ++EK VLMVV+PLQV+ANIA +VI E+GP+ + WVTW
Sbjct: 253 VLLFTVIVLIGTGWSFLKPFLQEKEKNVLMVVVPLQVLANIASIVIGETGPFIKDWVTWN 312
Query: 327 QVLLLVDVICCCAVLFPIVWSIKNLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTR 386
Q+ LLVD++CCCA+LFPIVWSI++LRE +++DGKAA NL KLTLFRQ+Y+VVI Y+YFTR
Sbjct: 313 QIFLLVDIVCCCAILFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTR 372
Query: 387 VVVYALMTITSYRYQWTSYVAKELATLAFYVFTGYKFRPEVHNPYFAI 434
+VV+AL TI +Y+Y+W S A+E+A+LAFY+ Y FRP N YF I
Sbjct: 373 IVVFALKTIAAYKYRWVSNAAEEIASLAFYMLMFYMFRPVEKNEYFVI 420
>AT5G02630.1 | chr5:591798-593084 FORWARD LENGTH=429
Length = 428
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/404 (40%), Positives = 235/404 (58%), Gaps = 13/404 (3%)
Query: 28 EIRETVIRSDPRSIIPLDEFGFSHSGVLELNVSGIAFDPPASSELDLSQLGFFLSTLDAW 87
EI+ I +D R +I L++FG G + ++VS ++ P LD S+LGFF+ + ++
Sbjct: 23 EIKSFTISNDSRPVILLEKFGIIEIGHVTVSVSSVSVLSPI---LDSSKLGFFVLSEESL 79
Query: 88 VHVLRQLQDLDVTCALQADLVKLAYSFDRLRPPSNPAGVEVARSSSFSTAFPVSEPGQYT 147
HVL +LQ C L + + ++F L PP S FS ++P++ P Y+
Sbjct: 80 PHVLLELQQNFSFCVLDSHYILHFFTFVDLSPPPR---------SQFSKSYPITSPNDYS 130
Query: 148 LVFANCLGGGLKVSMDVRSAMYNVDPPTGERSYLSAGATALPTIXXXXXXXXXXXXXXXX 207
L FANC+ +VSM V + +Y+ P G R YL AG+ LP +
Sbjct: 131 LFFANCVPET-RVSMKVHTEIYHDLYPNGSRDYLLAGSAQLPGLYLVFFLCYLSFLCFWL 189
Query: 208 XXXXRKRAAVFRIHYFMXXXXXXXXXXXXXEAEDKSYIERTGTAHGWDVLFYIFSFLKGI 267
+ V RIH M A K Y++ TGTAHGW+++FYIF F+ +
Sbjct: 190 CFCWNHKQIVKRIHLLMTALLLVKSLTLICAAVYKHYVKVTGTAHGWNIVFYIFQFISVV 249
Query: 268 SLFTLIVLIGTGWSFLKPYLADREKKVLMVVIPLQVVANIAQVVIDESGPYARAWVTWKQ 327
LF +IVLIG GWSFLKP L +EKK+L++V+PLQV+ANIA +VI E+GPY + WV+W Q
Sbjct: 250 LLFMVIVLIGNGWSFLKPKLHVKEKKLLVIVVPLQVLANIASIVIGETGPYTQDWVSWNQ 309
Query: 328 VLLLVDVICCCAVLFPIVWSIKNLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTRV 387
+ L D+ CCCA++F +VWS+ LRE +++DGKA NL KL + R++YV+VI Y++FTR+
Sbjct: 310 IFFLADITCCCAIVFAMVWSMCCLRETSKTDGKAVKNLAKLPVLRKFYVLVIGYLFFTRI 369
Query: 388 VVYALMTITSYRYQWTSYVAKELATLAFYVFTGYKFRPEVHNPY 431
VV + + YQW S A+E+ATL+FY Y FRP N Y
Sbjct: 370 VVVVMKMKADFTYQWVSNAAEEIATLSFYCLMFYMFRPIEKNEY 413
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,822,253
Number of extensions: 286984
Number of successful extensions: 846
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 828
Number of HSP's successfully gapped: 4
Length of query: 454
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 352
Effective length of database: 8,310,137
Effective search space: 2925168224
Effective search space used: 2925168224
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)