BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0105800 Os06g0105800|AK119640
(298 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332 241 5e-64
AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299 238 4e-63
AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288 230 7e-61
AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304 218 3e-57
AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294 211 4e-55
AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388 104 6e-23
AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288 97 9e-21
AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646 96 2e-20
AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609 96 3e-20
AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373 92 3e-19
AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337 92 3e-19
>AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332
Length = 331
Score = 241 bits (614), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/260 (52%), Positives = 175/260 (67%), Gaps = 17/260 (6%)
Query: 23 EDDGGRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQ 82
E+D +++RKPYTITKSRESWT+PEHDKFLEALQLFDRDWKKIEA++GSKTVIQIRSHAQ
Sbjct: 55 EEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQ 114
Query: 83 KYFLKVQKNGTGEHLXXXXXXXXXXXXXXHKASKRAPQVVLPQQASHLMEQGCLIPMDIS 142
KYFLKVQK+GTGEHL KA K Q+ +P E P D S
Sbjct: 115 KYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNV-QLQVPGSFKSTSE-----PNDPS 168
Query: 143 PVARNFNANDVFSSWDSALAQ---------SFSPRHTHGAANNCSSSVESQSGTCPTS-- 191
+ R +++ + +S +A A SF+P GA N + S S++ P S
Sbjct: 169 FMFRPESSSMLMTSPTTAAAAPWTNNAQTISFTPLPKAGAGANNNCSSSSENTPRPRSNR 228
Query: 192 EAIEQEIMLPTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSI 251
+A + + +LR +PDFAQVY F+GS+FDP S HLQ+L++MDPIDVETVLLLM+NLSI
Sbjct: 229 DARDHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLKKMDPIDVETVLLLMRNLSI 288
Query: 252 NLTNPNFEAHRKVLASHGYG 271
NL++P+FE HR++L+S+ G
Sbjct: 289 NLSSPDFEDHRRLLSSYDIG 308
>AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299
Length = 298
Score = 238 bits (606), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 167/268 (62%), Gaps = 38/268 (14%)
Query: 22 VEDDGGRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHA 81
V + ++VRKPYTITKSRESWT+ EHDKFLEALQLFDRDWKKIE +VGSKTVIQIRSHA
Sbjct: 25 VAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHA 84
Query: 82 QKYFLKVQKNGTGEHLXXXXXXXXXXXXXXHKASKRAPQVVLPQQASHLMEQGCLIPMDI 141
QKYFLKVQKNGT H+ KR PQ+AS + +P+ +
Sbjct: 85 QKYFLKVQKNGTLAHVPPPR-------------PKRKAAHPYPQKAS----KNAQMPLQV 127
Query: 142 SPVARNFNANDV--FSSWDSA---LAQSFSPRH-------------THGAANNCSSSVE- 182
S D+ ++SWD A L + SP+H + G N S S
Sbjct: 128 STSFTTTRNGDMPGYASWDDASMLLNRVISPQHELATLRGAEADIGSKGLLNVSSPSTSG 187
Query: 183 --SQSGTCPTSEAIEQEIMLPTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVE 240
S S T SE + + P L +PDFA+VYNF+GS+FDPET GH+++L+EMDPI+ E
Sbjct: 188 MGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETRGHVEKLKEMDPINFE 247
Query: 241 TVLLLMKNLSINLTNPNFEAHRKVLASH 268
TVLLLM+NL++NL+NP+ E+ RKVL S+
Sbjct: 248 TVLLLMRNLTVNLSNPDLESTRKVLLSY 275
>AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288
Length = 287
Score = 230 bits (587), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/252 (49%), Positives = 165/252 (65%), Gaps = 17/252 (6%)
Query: 24 DDGGRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQK 83
+D ++VRKPYTITKSRE+WT+ EHDKFLEAL LFDRDWKKI+A+VGSKTVIQIRSHAQK
Sbjct: 45 EDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQK 104
Query: 84 YFLKVQKNGTGEHLXXXXXXXXXXXXXXHKASKRAPQVVLPQQASHLMEQGCLIPMDISP 143
YFLKVQKNGT EHL H ++AP+ L ++ L + L + P
Sbjct: 105 YFLKVQKNGTKEHL----PPPRPKRKANHPYPQKAPKFTL-SSSNALFQHDYLYNTNSHP 159
Query: 144 VARNFNANDV----FSSWDSALAQSFSPRHTHGAANNCSSSVESQSG--TCPTSEAIEQE 197
V + + S S + + F G + NC S+ S+ T +E +QE
Sbjct: 160 VISTTRKHGLVHCDVSIPSSVIKEEF------GVSENCCSTSSSRDKQRTRIVTETNDQE 213
Query: 198 IMLPTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPN 257
R P+FA+VYNF+GS+FDP+T+GH++RL+EMDPI++ETVLLLMKNLS+NLT+P
Sbjct: 214 SCGKPHRVAPNFAEVYNFIGSVFDPKTTGHVKRLKEMDPINLETVLLLMKNLSVNLTSPE 273
Query: 258 FEAHRKVLASHG 269
F+ RK+++S+
Sbjct: 274 FDEQRKLISSYN 285
>AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304
Length = 303
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 155/257 (60%), Gaps = 12/257 (4%)
Query: 24 DDGGRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQK 83
+D ++RKPYTI KSRE+WTD EHDKFLEAL LFDRDWKKIEA+VGSKTV+QIRSHAQK
Sbjct: 43 EDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQK 102
Query: 84 YFLKVQKNGTGEHLXXXXXXXXXXXXXXHKASKRAPQVVLPQQAS-HLMEQGCLIPMDIS 142
YFLKVQK+G EHL KA K LP ++ L+E G L D
Sbjct: 103 YFLKVQKSGANEHLPPPRPKRKASHPYPIKAPKNVAYTSLPSSSTLPLLEPGYLYSSDSK 162
Query: 143 PVARN-FNANDVFSSWDSALAQSFSP---------RHTHGAANNCSSSVESQSGTCPTSE 192
+ N SSW+ P T NN +++ T
Sbjct: 163 SLMGNQAVCASTSSSWNHESTNLPKPVIEVEEPGVSATAPLPNNRCRQEDTERVRAVTKP 222
Query: 193 AIEQEIMLPTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSIN 252
E+ P R MP+FA+VY+F+GS+FDP TSGHLQRL++MDPI++ETVLLLM+NLS+N
Sbjct: 223 NNEESCEKPH-RVMPNFAEVYSFIGSVFDPNTSGHLQRLKQMDPINMETVLLLMQNLSVN 281
Query: 253 LTNPNFEAHRKVLASHG 269
LT+P F R++++S+
Sbjct: 282 LTSPEFAEQRRLISSYS 298
>AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294
Length = 293
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 153/244 (62%), Gaps = 16/244 (6%)
Query: 28 RRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLK 87
++VRK YTITKSRESWT+ EHDKFLEALQLFDRDWKKIE +VGSKTVIQIRSHAQKYFLK
Sbjct: 36 KKVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLK 95
Query: 88 VQKNGTGEHLXXXXXXXXXXXXXXHKASKRAP-----QVVLPQQASHLM-------EQGC 135
VQKNGT H+ KASK A + P Q ++L +
Sbjct: 96 VQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMSLHVSMSFPTQINNLPGYTPWDDDTSA 155
Query: 136 LIPMDISPVARNFNANDVFSSWDSALAQSFSPRHTHGAANNCSSSVESQSGTCPTSEAIE 195
L+ + +S V + D + + + T +A S + S S T S+ +
Sbjct: 156 LLNIAVSGVIPPEDELDTLCGAEVDVGSNDMISETSPSA----SGIGSSSRTLSDSKGLR 211
Query: 196 QEIMLPTLRAMPDFAQVYNFLGSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTN 255
P++ +PDFA+VYNF+GS+FDP++ G +++L+EMDPI+ ETVLLLM+NL++NL+N
Sbjct: 212 LAKQAPSMHGLPDFAEVYNFIGSVFDPDSKGRMKKLKEMDPINFETVLLLMRNLTVNLSN 271
Query: 256 PNFE 259
P+FE
Sbjct: 272 PDFE 275
>AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388
Length = 387
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 56/71 (78%)
Query: 24 DDGGRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQK 83
+D +VRKPYTITK RE WTD EH KF+EAL+L+ R W++IE +VGSKT +QIRSHAQK
Sbjct: 39 NDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQK 98
Query: 84 YFLKVQKNGTG 94
+F KV + TG
Sbjct: 99 FFSKVAREATG 109
>AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288
Length = 287
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 53/63 (84%)
Query: 29 RVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKV 88
+ RKPYTITK RE WT+ EH+KF+EAL+L+ R W++IE +VG+KT +QIRSHAQK+F KV
Sbjct: 25 KTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKV 84
Query: 89 QKN 91
++
Sbjct: 85 ARD 87
>AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646
Length = 645
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 53/62 (85%)
Query: 29 RVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKV 88
+ RKPYTITK RE WT+ EH++FLEAL+L+ R W++IE ++G+KT +QIRSHAQK+F K+
Sbjct: 13 KARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKL 72
Query: 89 QK 90
+K
Sbjct: 73 EK 74
>AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609
Length = 608
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 52/62 (83%)
Query: 29 RVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKV 88
+ RKPYTITK RE WT+ EH++F+EAL+L+ R W+KIE +V +KT +QIRSHAQK+F KV
Sbjct: 13 KTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKV 72
Query: 89 QK 90
+K
Sbjct: 73 EK 74
>AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373
Length = 372
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 52/60 (86%)
Query: 29 RVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKV 88
+VRKPYT+TK RE W++ EHD+FLEA++L+ R W++I+ ++G+KT +QIRSHAQK+F K+
Sbjct: 65 KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 124
>AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337
Length = 336
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 52/60 (86%)
Query: 29 RVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAYVGSKTVIQIRSHAQKYFLKV 88
+VRKPYT+TK RE W++ EHD+FLEA++L+ R W++I+ ++G+KT +QIRSHAQK+F K+
Sbjct: 54 KVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKM 113
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.130 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,057,375
Number of extensions: 230211
Number of successful extensions: 686
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 699
Number of HSP's successfully gapped: 11
Length of query: 298
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 200
Effective length of database: 8,419,801
Effective search space: 1683960200
Effective search space used: 1683960200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)