BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0103600 Os06g0103600|AK072800
         (1068 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48110.1  | chr3:17763111-17770964 FORWARD LENGTH=1068        1451   0.0  

>AT3G48110.1 | chr3:17763111-17770964 FORWARD LENGTH=1068
          Length = 1067

 Score = 1451 bits (3755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1001 (69%), Positives = 832/1001 (83%), Gaps = 4/1001 (0%)

Query: 70   SVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWNVAYVEPSIR 129
            SV TFQQAIQRLQ+YWASVGCAVMQ SNTEVGAGTMNP TFLRVLGPEPWNVAYVEPSIR
Sbjct: 69   SVPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPCTFLRVLGPEPWNVAYVEPSIR 128

Query: 130  PDDSRYGDNPNRLQRHTQFQVILKPDPGNSQDLFLHSLSALGINVREHDIRFVEDNWESP 189
            PDDSRYG+NPNRLQRHTQFQVILKPDPGNSQ LF++SLSALGI+V  HDIRFVEDNWESP
Sbjct: 129  PDDSRYGENPNRLQRHTQFQVILKPDPGNSQQLFINSLSALGIDVTAHDIRFVEDNWESP 188

Query: 190  VLGAWGLGWEVWMDGMEITQFTYFQQSGSLPLLPVSVEITYGLERILMSLQGVDHFKNIQ 249
            VLGAWGLGWE+WMDGMEITQFTYFQQ+GSLPL PVSVEITYGLERI+M LQ VDHFK I 
Sbjct: 189  VLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQEVDHFKKIL 248

Query: 250  YTKGITYGELFLENEKEMSAYYLEHANVDNIQKHFDDFEEEARSLLSLWLPIPAYDHVLK 309
            Y  GITYGELFLENEKEMS+YYLEHA+VD +QKHFD F+EEARSLL+L LPIPAYD +LK
Sbjct: 249  YADGITYGELFLENEKEMSSYYLEHASVDRLQKHFDYFDEEARSLLALGLPIPAYDQLLK 308

Query: 310  ASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKTRENLGYPLGTYQESNLIYPH 369
             SHAFNILD+RGF+GVTERARYFGRMRSLARQCAQLW+ TRE+LG+PLG   E      H
Sbjct: 309  TSHAFNILDARGFIGVTERARYFGRMRSLARQCAQLWLATRESLGHPLGVASEPVPPVCH 368

Query: 370  VS--EKPSRKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRS 427
             +  EK + K V   PR+F++EIGTEE+PP DVI A++QL   ++++LE +RL HG V++
Sbjct: 369  RAALEKVAEK-VSEDPRSFIIEIGTEEMPPQDVINASEQLRVLVLELLENQRLRHGAVKA 427

Query: 428  YGTPRRLAVVVENLNMKQMEEEIELRGPPVAKAFDQEGRPTKAAEGFCRKNNVLIDSLYR 487
            +GTPRRL V+V+ ++ KQ+EEE+E+RGPP +KAFD EG PTKAAEGF R+  V ++ LYR
Sbjct: 428  FGTPRRLVVLVDAMSSKQLEEEVEVRGPPASKAFDDEGNPTKAAEGFSRRYGVPLEKLYR 487

Query: 488  RTDGKTEYIYARVKESARFADEVLTEDLPTIISGISFPKSMRWNSNIVFSRPIRWIFALH 547
            +  GKTEY++ARV E AR A EVL+EDLP I++ ISFPKSMRWNS+++FSRPIRW+ ALH
Sbjct: 488  KVSGKTEYVHARVTEPARLALEVLSEDLPGILAKISFPKSMRWNSSVMFSRPIRWVMALH 547

Query: 548  GDLIVPFCFAGISSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHD 607
            GDL+VPF FAGISSGN SCGLRN++ A+  V+ AE Y  T+  +GI I+++ERK+ IL  
Sbjct: 548  GDLVVPFSFAGISSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEERKKIILEK 607

Query: 608  SSILAEGVGGDIIAPDSLVQEVINLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFP 667
            S+ LA+ V G ++ P +L+ EV NLVEAP+P+IG++  SFL LP+++L  VMQKHQKYF 
Sbjct: 608  SNALAKSVSGRLVVPQNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVMQKHQKYFS 667

Query: 668  VTSKTMGNLLPCFITVANGAIKEEVVRKGNEAVLRARYEDAKFFYKMDTQKKLSEFRDQL 727
            +  ++ G LLP FI VANGAI E+VV+KGNEAVLRARYEDAKFFY++DT+K+ SEFRDQL
Sbjct: 668  IIDES-GQLLPYFIAVANGAINEDVVKKGNEAVLRARYEDAKFFYEVDTRKRFSEFRDQL 726

Query: 728  SSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIKDAAALAMSDLATNIVTEFT 787
              ILFHE+LGTMLDKM R++  V+++ L L I+E ++P ++DAA+LAMSDLAT +VTEFT
Sbjct: 727  QGILFHEKLGTMLDKMNRLKKMVSKLCLALKIDEDLLPVVEDAASLAMSDLATAVVTEFT 786

Query: 788  SLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTDPGIVLAVTDRLDSLVGLFG 847
            +L+GIMARHYALRDG SEQIAEAL EITLPRFSGDV PKTD G+VLA+ DRLDSLVGLF 
Sbjct: 787  ALSGIMARHYALRDGYSEQIAEALLEITLPRFSGDVIPKTDAGMVLAIGDRLDSLVGLFA 846

Query: 848  AGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLVAEEQPITIDSGVIDEVVQF 907
            AGCQPSSTNDPFGLRRISYGLVQILVE  KN +  + L L A  QP  +++  +++V QF
Sbjct: 847  AGCQPSSTNDPFGLRRISYGLVQILVEKDKNVNFKRVLELAASVQPTKVEANTVEDVYQF 906

Query: 908  VTRRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEMEAFSRTEDFPKIVEAYSRPA 967
            VTRRLEQLLVD G++ E+VRSVL ER N P LA++TA + E  S+ E FPKIVEAYSRP 
Sbjct: 907  VTRRLEQLLVDNGVSPEVVRSVLAERGNNPCLAARTAYKTEKLSKGEMFPKIVEAYSRPT 966

Query: 968  RIIRGKEIGSALEVDASVFEKDEERALWSAYLEVADKIHPGVDIKAFADASLELLQPLED 1027
            RI+RGK++G  +EVD + FE  +ER LWS Y  + D+IH G++I+ F + S++L++PLED
Sbjct: 967  RIVRGKDVGVGVEVDENAFETPQERTLWSTYTSIKDRIHTGIEIEDFTEISMQLVEPLED 1026

Query: 1028 FFTNVFVMAEDERVRNNRLALLTKVASLPKGIADLSVLPGF 1068
            FF NVFVM E+ERVR NRLALL  +A+LPKG+ DLS LPGF
Sbjct: 1027 FFNNVFVMVEEERVRKNRLALLNNIANLPKGVIDLSFLPGF 1067



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,446,194
Number of extensions: 921672
Number of successful extensions: 2032
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2030
Number of HSP's successfully gapped: 1
Length of query: 1068
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 959
Effective length of database: 8,118,225
Effective search space: 7785377775
Effective search space used: 7785377775
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)